New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 893340 =129 (1.380)8 (0.090) 8/190 NT 6.6% coding (384/477 nt) ybjN negative regulator of motility; multicopy suppressor of coaA(Ts)
?NC_000913 893369 = 105 (1.180)coding (413/477 nt) ybjN negative regulator of motility; multicopy suppressor of coaA(Ts)

Only 100 of 136 total aligned reads displayed.

TGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTAA  >  NC_000913/893223‑893512
                                                                                                                                                  |                                                                                                                                                
tGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCaa                                                                                                                                                 <  4:712806/148‑1 (MQ=255)
         ggATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTa                                                                                                                                       >  2:209364/1‑148 (MQ=255)
                 aTCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtga                                                                                                                               >  1:151909/1‑148 (MQ=255)
                  tCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtg                                                                                                                                >  4:179670/1‑146 (MQ=255)
                  tCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtg                                                                                                                                <  3:179670/146‑1 (MQ=255)
                    tGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGACAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtgatga                                                                                                                            <  2:908130/148‑1 (MQ=255)
                        aaaGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        >  2:340097/1‑148 (MQ=255)
                         aaGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCTACTGCTGTTACCGACTGATGATGAAg                                                                                                                       >  3:131173/1‑148 (MQ=255)
                         aaGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTCCTGTTACCg                                                                                                                                    <  3:70028/135‑1 (MQ=255)
                                tggtTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAg                                                                                                                       >  1:996102/1‑141 (MQ=255)
                                tggtTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCaaaa                                                                                                                >  1:449741/1‑148 (MQ=255)
                                aggtTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtgatga                                                                                                                            >  2:868759/2‑136 (MQ=255)
                                   tttGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTAATTCTTGAAGCTAATGCCCTTCAACTGCTGTTACCGACTGATGATGAAGGGCAAaacaa                                                                                                             <  4:131173/148‑1 (MQ=255)
                                       tcgaaaggagttatcagtggaggaaatagttttcggtaacgttgttttgcccttcatcatcagtcggtaacagcagttGATGGTCATTCTTGAAGCTAATGCCCATCAAc                                                                                                                                               <  4:799049‑M1/32‑1 (MQ=255)
                                         gaaaggagttatcagtggaggaaatagttttcggtaacgttgttttgcccttcatcatcagtcggtaacagcagttGATGGTCATTCTTGAAGCTAATGCCCATCAActg                                                                                                                                             <  3:793789‑M1/34‑1 (MQ=255)
                                         gaaaggagttatcagtggaggaaatagttttcggtaacgttgttttgcccttcatcatcagtcggtaacagcagttGATGGTCATTCTTGAAGCTAATGCCCATCAActg                                                                                                                                             >  4:793789‑M1/77‑110 (MQ=255)
                                         aGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTAc                                                                                                       >  1:86960/1‑148 (MQ=255)
                                          gTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCaaa                                                                                                                 >  2:829527/1‑137 (MQ=255)
                                          gTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCaaa                                                                                                                 <  1:829527/137‑1 (MQ=255)
                                              ttatcagtggaggaaatagttttcggtaacgttgttttgcccttcatcatcagtcggtaacagcagatttcGATGGTCATTCTTGAAGCTAATGCCCATCAActgctg                                                                                                                                          <  1:491662‑M1/37‑1 (MQ=255)
                                              ttatcagtggaggaaatagttttcggtaacgttgttttgcccttcatcatcagtcggtaacagcagatttcGATGGTCATTCTTGAAGCTAATGCCCATCAActgctg                                                                                                                                          >  2:491662‑M1/72‑108 (MQ=255)
                                                  ccGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGt                                                                                                                                         <  4:372015/105‑1 (MQ=255)
                                                  ccGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGt                                                                                                                                         >  3:372015/1‑105 (MQ=255)
                                                  ccGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        <  2:540893/122‑1 (MQ=255)
                                                  ccGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        >  1:540893/1‑122 (MQ=255)
                                                  ccGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTa                                                                                              <  1:340097/148‑1 (MQ=255)
                                                   cGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAaaca                                                                                                              >  2:450922/1‑131 (MQ=255)
                                                   cGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAt                                                                                             <  2:449741/148‑1 (MQ=255)
                                                    gTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCa                                                                                                                                                  >  4:113374/1‑95 (MQ=255)
                                                     ttATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtga                                                                                                                               >  2:175371/1‑112 (MQ=255)
                                                     ttATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGaaa                                                                                                  <  1:886126/141‑1 (MQ=255)
                                                     ttATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGaaa                                                                                                  >  2:886126/1‑141 (MQ=255)
                                                     ttATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTa                                                                                              <  4:896259/145‑1 (MQ=255)
                                                     ttATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTa                                                                                              >  3:896259/1‑145 (MQ=255)
                                                      tATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCATCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtc                                                                                          <  2:151909/148‑1 (MQ=255)
                                                          cAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        <  2:230782/114‑1 (MQ=255)
                                                          cAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        >  1:230782/1‑114 (MQ=255)
                                                          cAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcctcc                                                                                      >  4:202720/1‑148 (MQ=255)
                                                           aGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAaaca                                                                                                              >  1:816511/1‑123 (MQ=255)
                                                           aGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAaaca                                                                                                              <  2:816511/123‑1 (MQ=255)
                                                                      tATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCaaa                                                                                                                 >  3:488459/1‑109 (MQ=255)
                                                                      tATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCaaa                                                                                                                 <  4:488459/109‑1 (MQ=255)
                                                                      tATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcctcc                                                                                      >  1:1065166/1‑136 (MQ=255)
                                                                       aTGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAttt                                                                                           <  1:43983/130‑1 (MQ=255)
                                                                       aTGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAtt                                                                                            >  3:1042178/1‑129 (MQ=255)
                                                                        tGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAttt                                                                                           >  2:196391/1‑129 (MQ=255)
                                                                        tGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAttt                                                                                           <  1:196391/129‑1 (MQ=255)
                                                                        tGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCtt                                                                        <  1:147695/148‑1 (MQ=255)
                                                                          aGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTc                                                                      <  3:202720/148‑1 (MQ=255)
                                                                           gCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtgatga                                                                                                                            >  2:542941/1‑93 (MQ=255)
                                                                            cAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACt                                                                                               <  2:118571/121‑1 (MQ=255)
                                                                            cAGTTTGCATGGTTCGTGCGCCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACt                                                                                               >  1:118571/1‑121 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGaa                                                                                                                        >  1:827594/1‑87 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAgg                                                                                                                      <  3:535925/89‑1 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAgg                                                                                                                      >  4:535925/1‑89 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGtt                                                                                                         >  1:275930/1‑102 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAttt                                                                                           >  4:731061/1‑116 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcctcc                                                                                      >  3:23421/1‑121 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATa                                                                               >  3:720756/1‑128 (MQ=255)
                                                                                     tGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATa                                                                               <  4:720756/128‑1 (MQ=255)
                                                                                        ttCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAggg                                                                                                                     <  4:176521/87‑1 (MQ=255)
                                                                                        ttCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCttt                                                                       <  2:1080541/133‑1 (MQ=255)
                                                                                        ttCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCttt                                                                       >  1:1080541/1‑133 (MQ=255)
                                                                                         tCGTGCGTCTGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCg                                                                     <  3:573112/134‑1 (MQ=255)
                                                                                         tCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCg                                                                     >  4:573112/1‑134 (MQ=255)
                                                                                            tGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtgatgatga                                                                                                                         >  4:969275/1‑79 (MQ=255)
                                                                                                tCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCa                                                                                     >  3:1009900/1‑111 (MQ=255)
                                                                                                tCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCa                                                                                     <  4:1009900/111‑1 (MQ=255)
                                                                                                   gagCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACtgatg                                                                                                                             >  1:688809/1‑68 (MQ=255)
                                                                                                    agCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTAttt                                                                                           <  4:615699/101‑1 (MQ=255)
                                                                                                      cGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcct                                                                                        <  3:635332/102‑1 (MQ=255)
                                                                                                      cGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcct                                                                                        >  4:635332/1‑102 (MQ=255)
                                                                                                           cagcagttgatgggcattagcttcaagaatgaccatcgaAATCTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATaa                                                                              <  1:491662‑M2/69‑1 (MQ=255)
                                                                                                             cAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCtt                                                                        >  4:252665/1‑111 (MQ=255)
                                                                                                                cagttgatgggcattagcttcaagaatgaccatcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTc                                                                      >  4:793789‑M2/35‑110 (MQ=255)
                                                                                                                cagttgatgggcattagcttcaagaatgaccatcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTc                                                                      <  3:793789‑M2/76‑1 (MQ=255)
                                                                                                                 tttCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCttt                                                                       >  2:1112353/1‑108 (MQ=255)
                                                                                                                 tttCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCaaa                               >  3:175488/1‑148 (MQ=255)
                                                                                                                  ttCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCaaaa                              >  2:928194/1‑148 (MQ=255)
                                                                                                                  gttgatgggcattagcttcaagaatgaccatcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGa                                                                    >  3:799049‑M2/33‑110 (MQ=255)
                                                                                                                      ATGGTCATTCTTGAAGCTAATGTCCATCAACTGCTGt                                                                                                                                         >  3:976108‑M1/1‑37 (MQ=255)
                                                                                                                         GTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTg                       >  3:771029‑M1/1‑148 (MQ=255)
                                                                                                                          tCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCa                                                                                     >  1:176774/1‑85 (MQ=255)
                                                                                                                          tCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCa                                                                                     <  2:176774/85‑1 (MQ=255)
                                                                                                                          gcattagcttcaagaatgaccatcAACTGCTGTTACCGACTGATGATGAAGGGc                                                                                                                    >  4:472875‑M2/25‑54 (MQ=255)
                                                                                                                          gcattagcttcaagaatgaccatcAACTGCTGTTACCGACTGATGATGAAGGGc                                                                                                                    <  3:472875‑M2/30‑1 (MQ=255)
                                                                                                                           cATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTtcctcc                                                                                      >  1:1847/1‑83 (MQ=255)
                                                                                                                           cATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTgcg                                        >  2:1028000/1‑129 (MQ=255)
                                                                                                                           cATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTgcg                                        <  1:1028000/129‑1 (MQ=255)
                                                                                                                                  gAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTa              <  1:928194/148‑1 (MQ=255)
                                                                                                                                      cTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCttt                                                                       <  3:110307/87‑1 (MQ=255)
                                                                                                                                      cTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCttt                                                                       >  4:110307/1‑87 (MQ=255)
                                                                                                                                         aTGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCtttt       >  4:1032377/1‑148 (MQ=255)
                                                                                                                                              catcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTaa  >  3:114009‑M2/5‑148 (MQ=255)
                                                                                                                                               atcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGttt                 <  2:407062‑M2/129‑1 (MQ=255)
                                                                                                                                                tcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTa              <  1:589967‑M2/132‑1 (MQ=255)
                                                                                                                                                tcAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTa              >  2:589967‑M2/3‑134 (MQ=255)
                                                                                                                                                 cAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTaa  >  2:797426‑M2/2‑145 (MQ=255)
                                                                                                                                                 cAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTaa  <  1:716369‑M2/144‑1 (MQ=255)
                                                                                                                                                 cAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTaa  >  2:716369‑M2/2‑145 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
TGATATGCAGGATGATAATCTGCCAAAGCTGGTGGTTTGCCAGTCTTTATCCGTTATGCAGGGCGTAACCTATGAGCAGTTTGCATGGTTCGTGCGTCAGAGCGAAGAGCAGATTTCGATGGTCATTCTTGAAGCTAATGCCCATCAACTGCTGTTACCGACTGATGATGAAGGGCAAAACAACGTTACCGAAAACTATTTCCTCCACTGATAACTCCTTTCGAGCACGCAGTCGCTGGTGCAGTGGCTGCGCGCTGCAAAATTATCTGCTGTTTTTAACCTTTTCTTAA  >  NC_000913/893223‑893512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.