BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1682065	82 (0.880)	8 (0.090)	6/186	NT	9.3%	intergenic (‑35/‑94)	ydgC/rstA	GlpM family inner membrane protein/response regulator of RstAB two‑component system
*	?	NC_000913	= 1682073	79 (0.910)	8 (0.090)	6/186	NT	9.3%	intergenic (‑43/‑86)	ydgC/rstA	GlpM family inner membrane protein/response regulator of RstAB two‑component system

Only 100 of 101 total aligned reads displayed.

AATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTAC  >  NC_000913/1681935‑1682218

aaTCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaa                                                                                                                                          <  4:842038/148‑1 (MQ=255)

                   taatTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaa                                                                                                                              <  4:807285/141‑1 (MQ=255)

                   taatTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaa                                                                                                                              >  3:807285/1‑141 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaaa                                                                                                                                         >  4:911617/1‑119 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGaaaa                                                                                                                                         <  3:911617/119‑1 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACt                                                                                                                                       >  4:633985/1‑121 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACt                                                                                                                                       <  3:633985/121‑1 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACg                                                                                                                           >  3:1006732/1‑133 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACg                                                                                                                           <  4:1006732/133‑1 (MQ=255)

                              ttttGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAgtaagtaa                                                                                                            >  2:873922/1‑148 (MQ=255)

                                    tAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAg                                                                                                      <  1:873922/148‑1 (MQ=255)

                                     aaaaCACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTg                                                                                                                       <  2:33995/130‑1 (MQ=255)

                                     aaaaCACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTg                                                                                                                       >  1:33995/1‑130 (MQ=255)

                                         cacCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACc                                                                                                                                                  >  4:363921‑M2/1‑98 (MQ=255)

                                         cacCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACc                                                                                                                                                  <  3:363921‑M2/99‑2 (MQ=255)

                                              aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGt                                                                                                                                    <  3:737771/108‑1 (MQ=255)

                                              aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGt                                                                                                                                    >  4:737771/1‑108 (MQ=255)

                                              aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                             <  1:733132/115‑1 (MQ=255)

                                              aTCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                             >  2:733132/1‑115 (MQ=255)

                                               tCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                 >  1:404997/1‑126 (MQ=255)

                                               tCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                 <  2:404997/126‑1 (MQ=255)

                                                  aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTaaaa                                                                                                          >  3:792330/1‑130 (MQ=255)

                                                  aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTaaaa                                                                                                          <  4:792330/130‑1 (MQ=255)

                                                  aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTAt                                                                                            <  4:266294/144‑1 (MQ=255)

                                                  aCAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTAt                                                                                            >  3:266294/1‑144 (MQ=255)

                                                        cTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGATTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttt                                                                                  >  3:344890/1‑148 (MQ=255)

                                                          aCCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACctgat                                                                                                                                              >  1:434343‑M2/1‑81 (MQ=255)

                                                          aCCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACctgat                                                                                                                                              <  2:434343‑M2/86‑6 (MQ=255)

                                                               cgcACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                                                                                          <  3:1080781/101‑1 (MQ=255)

                                                               cgcACCGAGCGCGGCTTTGATTACCAGCCCCATCTGTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGa                                                                                                                          >  4:1080781/1‑101 (MQ=255)

                                                                 cACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaagt                                                                                                              <  4:891313/111‑1 (MQ=255)

                                                                 cACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaagt                                                                                                              >  3:891313/1‑111 (MQ=255)

                                                                   ccGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGAt                                                                                                                     <  3:312585/102‑1 (MQ=255)

                                                                   ccGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGAt                                                                                                                     >  4:312585/1‑102 (MQ=255)

                                                                    cGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGAt                                                                                                                         >  4:879202/1‑97 (MQ=255)

                                                                    cGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGAt                                                                                                                         <  3:879202/97‑1 (MQ=255)

                                                                    cGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGATTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                      <  4:344890/148‑1 (MQ=255)

                                                                            gCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGGATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaag                                                                                                               >  1:915389/1‑99 (MQ=255)

                                                                            gCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagtaag                                                                                                               <  2:915389/99‑1 (MQ=255)

                                                                               ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTa                                                                                             >  2:153282/1‑114 (MQ=255)

                                                                               ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTa                                                                                             <  1:153282/114‑1 (MQ=255)

                                                                               ttGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATg                                                           >  2:934666/1‑148 (MQ=255)

                                                                                  aTTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCTGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                             >  1:319211/1‑79 (MQ=255)

                                                                                  aTTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGaaa                                                                                                                             <  2:319211/79‑1 (MQ=255)

                                                                                   ttACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                 >  4:230838/1‑90 (MQ=255)

                                                                                   ttACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATagta                                                                                                                 <  3:230838/90‑1 (MQ=255)

                                                                                    tACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACctg                                                                                                                                                >  1:162611‑M2/1‑55 (MQ=255)

                                                                                    tACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACctg                                                                                                                                                <  2:162611‑M2/58‑4 (MQ=255)

                                                                                     aCCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                 <  2:1036885/104‑1 (MQ=255)

                                                                                     aCCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                 >  1:1036885/1‑104 (MQ=255)

                                                                                      ccAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTa                                                    <  1:934666/148‑1 (MQ=255)

                                                                                       cAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                <  4:4207/119‑1 (MQ=255)

                                                                                       cAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                >  3:4207/1‑119 (MQ=255)

                                                                                        aGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATtg                                                                                          <  3:916368/108‑1 (MQ=255)

                                                                                            ccATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                 <  1:134186/97‑1 (MQ=255)

                                                                                            ccATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCgg                                                                                                 >  2:134186/1‑97 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTtata                                                                             >  1:811015/1‑114 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTtata                                                                             <  2:811015/114‑1 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                              >  4:1054908/1‑129 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                              <  3:1054908/129‑1 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                        >  4:422035/1‑135 (MQ=255)

                                                                                               tCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                        <  3:422035/135‑1 (MQ=255)

                                                                                                   tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGttt                                                                                                                                  >  2:724942/1‑57 (MQ=255)

                                                                                                   tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGttt                                                                                                                                  <  1:724942/57‑1 (MQ=255)

                                                                                                   tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                <  3:579678/107‑1 (MQ=255)

                                                                                                   tttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGttttt                                                                                >  4:579678/1‑107 (MQ=255)

                                                                                                    ttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                      <  1:839676/116‑1 (MQ=255)

                                                                                                    ttACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCg                                                                      >  2:839676/1‑116 (MQ=255)

                                                                                                         ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTatat                                                                            >  3:3892/1‑105 (MQ=255)

                                                                                                         ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTatat                                                                            <  4:3892/105‑1 (MQ=255)

                                                                                                         ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGt                                                               >  3:1014066/1‑118 (MQ=255)

                                                                                                         ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGt                                                               <  4:1014066/118‑1 (MQ=255)

                                                                                                         ttAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAgatga                                 >  1:242270/1‑148 (MQ=255)

                                                                                                               cTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTtg                                           >  3:133346/1‑132 (MQ=255)

                                                                                                               cTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTtg                                           <  4:133346/132‑1 (MQ=255)

                                                                                                               cTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGa                           >  4:1045656/1‑148 (MQ=255)

                                                                                                                 tCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                                                                                       <  2:173233/70‑1 (MQ=255)

                                                                                                                 tCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACa                                                                                                       >  1:173233/1‑70 (MQ=255)

                                                                                                                      aaCAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGt                    >  1:551246/1‑148 (MQ=255)

                                                                                                                        cAAGTCATCAGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggt                                                                          <  2:589168‑M2/92‑74 (MQ=255)

                                                                                                                        cAAGTCATCAGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggt                                                                          >  1:589168‑M2/1‑19 (MQ=255)

                                                                                                                         aaGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                 >  2:1015051/1‑148 (MQ=255)

                                                                                                                         aaGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                 <  2:242270/148‑1 (MQ=255)

                                                                                                                          aGTCATCAGTAGAGTACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                        <  1:8046/108‑1 (MQ=255)

                                                                                                                          aGTCATCAGTAGAGTACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAac                                                        >  2:8046/1‑108 (MQ=255)

                                                                                                                          aGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                              <  1:334827/102‑1 (MQ=255)

                                                                                                                          aGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGCAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGtt                                                              >  2:334827/1‑102 (MQ=255)

                                                                                                                            tcatcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggtagtgctgttgattggtgttttagcaaaaacgaaaaattattatatcgccgggctgattcc              >  4:233030‑M2/1‑15 (MQ=255)

                                                                                                                            tcatcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaaagccgcgctcggtgcgctggtagtgctgttgattggtgttttagcaaaaacgaaaaattattatatcgccgggctgattcc              <  3:233030‑M2/148‑134 (MQ=255)

                                                                                                                             catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                               <  4:1103206‑M2/66‑53 (MQ=255)

                                                                                                                             catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                               <  4:324590‑M2/66‑53 (MQ=255)

                                                                                                                             catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                               >  3:1103206‑M2/1‑14 (MQ=255)

                                                                                                                             catcaGTAGAATACctgatgacttgttatggaagtgttaaggtaaaaagatggggctggtaatcaa                                                                                               >  3:324590‑M2/1‑14 (MQ=255)

                                                                                                                               tcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCt                                                                          >  1:976013/1‑85 (MQ=255)

                                                                                                                               tcaGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCt                                                                          <  2:976013/85‑1 (MQ=255)

                                                                                                                                   tAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTtg                                           <  2:848442/112‑1 (MQ=255)

                                                                                                                                   tAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTtg                                           >  1:848442/1‑112 (MQ=255)

                                                                                                                                      aaTACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                 >  4:218321/1‑135 (MQ=255)

                                                                                                                                      aaTACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCa                 <  3:218321/135‑1 (MQ=255)

                                                                                                                                        tACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTAc  <  2:551246/148‑1 (MQ=255)

AATCAGCCCGGCGATATAATAATTTTTCGTTTTTGCTAAAACACCAATCAACAGCACTACCAGCGCACCGAGCGCGGCTTTGATTACCAGCCCCATCTTTTTACCTTAACACTTCCATAACAAGTCATCAGTAGAATACCTGATGAAAACTTGTTTAGAAACGATTGATAGTAAGTAAAAACAGCGCGGTGTATTGTGACGTTTTTATATCTACCGTGAATGTTATGAACACTATCGTATTTGTGGAAGATGATGCGGAAGTCGGTTCACTGATTGCCGCGTAC  >  NC_000913/1681935‑1682218

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.