BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4638136 =	181 (0.900)	4 (0.020)	4/264	NT	2.3%	intergenic (+16/‑42)	creC/creD	sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein
*	?	NC_000913	4638182 =	176 (0.950)	4 (0.020)	4/264	NT	2.3%	coding (5/1353 nt)	creD	inner membrane protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 239 total aligned reads displayed.

CTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATG  >  NC_000913/4637908‑4638456

                                gcTTTAACGGATTTTTGAACGCTTTTACTCGTTGCCTCGTGGAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGGCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGc                                                                                                                                                                                                                                                     <  4:70074/274‑1 (MQ=255)

                                    tCACGTATTTTTGCACGCTTTTACCTTTTGCCTCGGGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGtt                                                                                                                                                                                                                                                <  4:313100/275‑1 (MQ=255)

                                              ttGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTa                                                                                                                                                                                                                                      >  2:43330/1‑275 (MQ=255)

                                                                                                                              cagcacgttcgacaatcacctgccgaatcagcattatcggaatcaacaacagcaatactgcaccaaacaggctagtcattttccagaacaggggggatttcaACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGtt                                                                                                                                                                                                                                                                                    >  6:129448‑M1/103‑149 (MQ=255)

                                                                                                                                tttgtttAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGa                                                                                                                                                    <  4:43330/275‑1 (MQ=255)

                                                                                                                                gcacgttcgacaatcacctgccgaatcagcattatcggaatcaacaacagcaatactgcaccaaacaggctagtcattttccagaacaggggggatttcaACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGa                                                                                                                                                                                                                                                                                  >  5:854003‑M1/101‑149 (MQ=255)

                                                                                                                                  tgtttAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGaaa                                                                                                                                                                                                                                                                                <  8:1362268/149‑1 (MQ=255)

                                                                                                                                  tgtttAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTGCAAATTCTTCCCACATAGTCTTCGTATCCTGCAGCCATTGCAAAGG‑AGAAGACTATGTTGaaa                                                                                                                                                                                                                                                                                <  7:528104/149‑1 (MQ=255)

                                                                                                                                     ttAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATcc                                                                                                                                                                                                                                                                             >  8:1308180/1‑149 (MQ=255)

                                                                                                                                      tAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATccc                                                                                                                                                                                                                                                                            <  5:330115/149‑1 (MQ=255)

                                                                                                                                        aCGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATccccc                                                                                                                                                                                                                                                                          >  8:1028261/1‑149 (MQ=255)

                                                                                                                                          ggCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCt                                                                                                                                                                                                                                                                        >  5:1233247/1‑149 (MQ=255)

                                                                                                                                           gCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTg                                                                                                                                                                                                                                                                       <  8:820966/149‑1 (MQ=255)

                                                                                                                                               aGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCt                                                                                                                                                                                                                                                                   <  7:1147942/149‑1 (MQ=255)

                                                                                                                                                 tCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTgg                                                                                                                                                                                                                                                                 <  7:68005/149‑1 (MQ=255)

                                                                                                                                                   aCGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTTTGGaaa                                                                                                                                                                                                                                                              >  2:97806/1‑150 (MQ=255)

                                                                                                                                                     gCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGaaaa                                                                                                                                                                                                                                                             <  6:732672/149‑1 (MQ=255)

                                                                                                                                                           cAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGAGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGTAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaa                                                                                                                          >  1:50173/1‑274 (MQ=255)

                                                                                                                                                                    ggAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCTCCCCTGTTCTGGAAAATGACTAGCCTGTTTg                                                                                                                                                                                                                                              <  6:370515/149‑1 (MQ=255)

                                                                                                                                                                    ggAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTg                                                                                                                                                                                                                                              <  7:895035/149‑1 (MQ=255)

                                                                                                                                                                      aaGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGt                                                                                                                                                                                                                                            <  6:1344335/149‑1 (MQ=255)

                                                                                                                                                                          tGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGACATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAg                                                                                                                                                                                                                                        >  5:476871/1‑149 (MQ=255)

                                                                                                                                                                          tGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTATCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGc                                                                                                          >  2:125350/1‑275 (MQ=255)

                                                                                                                                                                             cGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTAt                                                                                                                                                                                                                                     <  7:413720/149‑1 (MQ=255)

                                                                                                                                                                              gTGCTGGCCTCGCTTCGACTTCACCATCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTAtt                                                                                                                                                                                                                                    <  7:955392/149‑1 (MQ=255)

                                                                                                                                                                                    gCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgtt                                                                                                                                                                                                                              <  7:1331157/149‑1 (MQ=255)

                                                                                                                                                                                      cTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgttgt                                                                                                                                                                                                                            <  7:794982/149‑1 (MQ=255)

                                                                                                                                                                                            tCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTc                                                                                                                                                                                                                      <  6:317868/149‑1 (MQ=255)

                                                                                                                                                                                            tCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTc                                                                                                                                                                                                                      <  6:1233247/149‑1 (MQ=255)

                                                                                                                                                                                               aCTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGa                                                                                                                                                                                                                   <  7:1239669/149‑1 (MQ=255)

                                                                                                                                                                                               aCTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGa                                                                                                                                                                                                                   <  8:1082539/149‑1 (MQ=255)

                                                                                                                                                                                                 ttCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATa                                                                                                                                                                                                                 >  7:508540/1‑149 (MQ=255)

                                                                                                                                                                                                 ttCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATa                                                                                                                                                                                                                 >  5:27091/1‑149 (MQ=255)

                                                                                                                                                                                                   cACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCCCATCCCTATTCCTGTGACCGGGCt                                                                                 >  4:260113/1‑275 (MQ=255)

                                                                                                                                                                                                    aCCGTCACTTCACATAGCTTCAAATTCTTCCAACATAGTCGTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATGGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                                                 <  2:268039/274‑1 (MQ=255)

                                                                                                                                                                                                      cGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCt                                                                                                                                                                                                            >  7:358781/1‑149 (MQ=255)

                                                                                                                                                                                                       gTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTg                                                                                                                                                                                                           >  7:484513/1‑149 (MQ=255)

                                                                                                                                                                                                        tCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGa                                                                                                                                                                                                          >  5:395797/1‑149 (MQ=255)

                                                                                                                                                                                                         cACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAt                                                                                                                                                                                                         <  8:583155/149‑1 (MQ=255)

                                                                                                                                                                                                         cACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTCGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                                                           <  2:173468/275‑1 (MQ=255)

                                                                                                                                                                                                            ttCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCg                                                                                                                                                                                                      >  7:929531/1‑149 (MQ=255)

                                                                                                                                                                                                              cacaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc                                                                                                                                                                                                    <  5:1442822/149‑1 (MQ=255)

                                                                                                                                                                                                               acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGt                                                                                                                                                                                                                                                 >  8:642318/1‑103 (MQ=255)

                                                                                                                                                                                                               acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGt                                                                                                                                                                                                                                                 <  7:642318/103‑1 (MQ=255)

                                                                                                                                                                                                               acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCa                                                                                                                                                                                                   >  5:732590/1‑149 (MQ=255)

                                                                                                                                                                                                               acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCa                                                                                                                                                                                                   >  5:584856/1‑149 (MQ=255)

                                                                                                                                                                                                               acaAAGCCTCCAATTCTTCCCCCCTAGGCCTCCTATCCTTCCGCCCTTGCCAAGGAAGAAG‑CCATGTTGGAATTCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCa                                                                                                                                                                                                   <  5:1007471/149‑1 (MQ=255)

                                                                                                                                                                                                                    gCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTc                                                                                                                                                                                                                      >  6:650044/1‑125 (MQ=255)

                                                                                                                                                                                                                     cTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGCTTGGTGAAGTATTGCTTTTGTTGATTCCGATAATGCTGTTTCGGCAGGTGATCTTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCCCCAAAGTAACAGCGTGCCGCACAAACTCGTTGGGTCGCTCCTCGCTATTCCTGTACCCGAGCTTTATTCGTTgactgaaca                                                               >  4:10069/1‑267 (MQ=255)

                                                                                                                                                                                                                      ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgt                                                                                                                                                                                                                               >  6:910268/1‑114 (MQ=255)

                                                                                                                                                                                                                      ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgt                                                                                                                                                                                                                               <  5:910268/114‑1 (MQ=255)

                                                                                                                                                                                                                      ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAtt                                                                                                                                                                                            <  5:565968/149‑1 (MQ=255)

                                                                                                                                                                                                                       tCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGt                                                                                                                                                                                                >  8:177781/1‑144 (MQ=255)

                                                                                                                                                                                                                             tcttcCCACATTGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGTTAATGCTGATTCAGCAGGTGATTGTCGAAc                                                                                                                                                                                     <  8:1220570/149‑1 (MQ=255)

                                                                                                                                                                                                                               ttcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGt                                                                                                                                                                                   >  8:1407347/1‑149 (MQ=255)

                                                                                                                                                                                                                                 ttcaacatagtcttctcctttgcaatggcagcaggatacgaagactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTg                                                                                                                                                                                  >  8:67257‑M2/51‑149 (MQ=255)

                                                                                                                                                                                                                                  ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATGCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCt                                                                                                                                                                                >  5:953627/1‑149 (MQ=255)

                                                                                                                                                                                                                                  ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCt                                                                                                                                                                                >  8:382585/1‑149 (MQ=255)

                                                                                                                                                                                                                                  ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCt                                                                                                                                                                                >  5:1412789/1‑149 (MQ=255)

                                                                                                                                                                                                                                  ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCAGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCt                                                                                                                                                                                >  8:436916/1‑149 (MQ=255)

                                                                                                                                                                                                                                   cacaTAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTg                                                                                                                                                                               >  6:1248935/1‑149 (MQ=255)

                                                                                                                                                                                                                                    ACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGa                                                                                                                                                                              <  6:589387‑M1/149‑1 (MQ=255)

                                                                                                                                                                                                                                      catagtcttctcctttgcaatggcagcaggatacgaagactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGAt                                                                                                                                                                             <  6:854003‑M2/104‑1 (MQ=255)

                                                                                                                                                                                                                                         GTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTAcc                                                                                                                                                                         >  8:508540‑M1/1‑149 (MQ=255)

                                                                                                                                                                                                                                            TTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTa                                                                                                                                                                      >  8:522058‑M1/1‑149 (MQ=255)

                                                                                                                                                                                                                                            TTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTa                                                                                                                                                                      <  5:1154085‑M1/149‑1 (MQ=255)

                                                                                                                                                                                                                                             TCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGa                                                                                                                                                                              >  7:1424036‑M1/1‑140 (MQ=255)

                                                                                                                                                                                                                                             TCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGa                                                                                                                                                                              <  8:1424036‑M1/140‑1 (MQ=255)

                                                                                                                                                                                                                                                tATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGaa                                                                                                                                                                                      <  8:784795/129‑1 (MQ=255)

                                                                                                                                                                                                                                                tATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATACTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGa                                                                                                                                                                  <  8:323097/149‑1 (MQ=255)

                                                                                                                                                                                                                                                 aTCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGAt                                                                                                                                                                 <  8:748100/149‑1 (MQ=255)

                                                                                                                                                                                                                                                 aTCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGAt                                                                                                                                                                 <  5:665561/149‑1 (MQ=255)

                                                                                                                                                                                                                                                     tgctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTgg                                                                                                                                                             >  5:1077865/1‑149 (MQ=255)

                                                                                                                                                                                                                                                     tgctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTAATGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTgg                                                                                                                                                             >  7:169375/1‑149 (MQ=255)

                                                                                                                                                                                                                                                      gctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGa                                                                                                                                                            >  8:48090/1‑149 (MQ=255)

                                                                                                                                                                                                                                                       ctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGaa                                                                                                                                                           <  8:879546/149‑1 (MQ=255)

                                                                                                                                                                                                                                                       ctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGaa                                                                                                                                                           <  6:307933/149‑1 (MQ=255)

                                                                                                                                                                                                                                                       ctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGaa                                                                                                                                                           <  6:1305453/149‑1 (MQ=255)

                                                                                                                                                                                                                                                       ctgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTGCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTCTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGaa                                                                                                                                                           <  6:985862/149‑1 (MQ=255)

                                                                                                                                                                                                                                                        tgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAATTGACTAGCCTGTTTGGTGCAGTCTTGCTGTTGTTGATTCCGa                                                                                                                                                                                                                   <  7:858780/92‑1 (MQ=255)

                                                                                                                                                                                                                                                        tgcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGa                                                                                                                                                                                                                   >  8:858780/1‑92 (MQ=255)

                                                                                                                                                                                                                                                         gcCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGa                                                                                                                                                         <  7:1027958/149‑1 (MQ=255)

                                                                                                                                                                                                                                                             ttGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGa                                                                                                                                                                              <  7:157168/124‑1 (MQ=255)

                                                                                                                                                                                                                                                                cAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGAtt                                                                                                                                                  >  7:317228/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                 aaaGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTc                                                                                                                                                 >  5:1296775/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                 aaaGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTc                                                                                                                                                 >  6:470215/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                 aaaGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTc                                                                                                                                                 >  8:412244/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                   aGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGa                                                                                                                                                    >  5:819311/1‑144 (MQ=255)

                                                                                                                                                                                                                                                                     g‑agaAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTAc                                                                                                                                                                          <  6:1425366/120‑1 (MQ=255)

                                                                                                                                                                                                                                                                         aagactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTa                                                                                                                                                                           <  5:249658‑M2/106‑1 (MQ=255)

                                                                                                                                                                                                                                                                         aagactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTa                                                                                                                                                                           >  6:249658‑M2/11‑116 (MQ=255)

                                                                                                                                                                                                                                                                         aagactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAg                                                                                                                                          <  8:1447656‑M2/139‑1 (MQ=255)

                                                                                                                                                                                                                                                                           gactatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTa                                                                                                                                        >  6:474990‑M2/9‑149 (MQ=255)

                                                                                                                                                                                                                                                                            actatgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTAc                                                                                                                                       <  6:1077865‑M2/142‑1 (MQ=255)

                                                                                                                                                                                                                                                                                tgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGc                                                                                                                                                      >  2:375245‑M2/4‑130 (MQ=255)

                                                                                                                                                                                                                                                                                tgtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCTGCCCCCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAACTTTATCCGGTGCAGGAAGTGGATAAACCCGGTGTGCGGACACGAAGTGTTATCCATTTTTGGTTACCTgattcctgt     >  4:36780‑M2/4‑271 (MQ=255)

                                                                                                                                                                                                                                                                                 gtTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCg                                                                                                                                  >  8:483604‑M2/3‑149 (MQ=255)

                                                                                                                                                                                                                                                                                  tTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCgg                                                                                                                                 >  5:179250‑M2/2‑149 (MQ=255)

                                                                                                                                                                                                                                                                                  tTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCgg                                                                                                                                 >  6:189223‑M2/2‑149 (MQ=255)

                                                                                                                                                                                                                                                                                  tTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCgg                                                                                                                                 <  5:1327092‑M2/148‑1 (MQ=255)

CTGGATACCGGTAGTGGTATTCCTGACTACGCGCTTTCACGTATTTTTGAACGCTTTTACTCTTTGCCTCGTGCAAATGGGCAAAAAAGCAGCGGTCTGGGGTTGGCGTTCGTCAGTGAGGTCGCCCGTTTGTTTAACGGCGAAGTCACGCTGCGCAACGTGCAGGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGG‑AGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTATCCATTTTTGGTTACCTGAGTCATTGATG  >  NC_000913/4637908‑4638456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.