New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3255287NA (NA)5 (0.020) 4/278 NT NA noncoding (71/103 nt) REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3255319 NA (NA)noncoding (103/103 nt) REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 268 total aligned reads displayed.

CTAGTTGTTTTTACAGGGAGATGATGATGAGTAAAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGAC  >  NC_000913/3255017‑3255554
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                           
                  atatgtagaagaGGAAAAAATTTGCCAAAAAGGCCCCGCCGGTGAAGCTCGCGGGTGCGAACGAACCTGCTCGCACCGCTAAAAATTTTGGATATGAAGAGATGTTGAGGGGGCTGGAAGGTATCGGCGCGGATGCTGAAACGCGTTTAGCCAAGGATGAAGCTACCGCGTAAAGACAGGTTGACGGATGCGGCGAAAACGCATTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcat                                                                                                                                                                                                                                                       <  4:124326/265‑1 (MQ=255)
                                 aaaaaTTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                                                                                                                                                                                                                                         <  2:321838/274‑1 (MQ=255)
                                             aaaaGCGCCAGCCGGGGAAGCCCGGGGAGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGGTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGt                                                                                                                                                                                                                        <  1:133921/279‑1 (MQ=255)
                                                           gggAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAGGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTGTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAATCCGTAGGCCGGACAAGATGCGCCAGCATCGCTTCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGcc                                                                                                                                                                                                              <  2:129843/273‑1 (MQ=255)
                                                                     tggtggCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGc                                                                                                                                                                                                      >  2:414485/1‑273 (MQ=255)
                                                                                                                             agcgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGgcc                                                                                                                                                                                                                                                                          <  8:690076‑M1/149‑4 (MQ=255)
                                                                                                                                 agcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACg                                                                                                                                                                                                                                          <  1:276721/177‑1 (MQ=255)
                                                                                                                                    tGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                                                                                                                                                                                                                                   >  5:1079409/1‑149 (MQ=255)
                                                                                                                                      aaaGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCa                                                                                                                                   <  2:629550/274‑1 (MQ=255)
                                                                                                                                        aGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                                                                                                                                                                                                                                               <  5:1148582/149‑1 (MQ=255)
                                                                                                                                        aGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                                                                                                                                                                                                                                               <  7:1126634/149‑1 (MQ=255)
                                                                                                                                        aGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgc                                                                                                                                                                                                                                                               >  6:938456/1‑149 (MQ=255)
                                                                                                                                             tcgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa                                                                                                                                                                                                                                                                  >  6:765066/1‑141 (MQ=255)
                                                                                                                                                tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcat                                                                                                                                                                                                                                                       >  7:735143/1‑149 (MQ=255)
                                                                                                                                                 cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                                                                                                                                                                                                                                      <  6:170231/149‑1 (MQ=255)
                                                                                                                                                 cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                                                                                                                                                                                                                                      <  7:200284/149‑1 (MQ=255)
                                                                                                                                                    ggATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGgccggacaagatgctggcgcatcttg                                                                                                                                                                                                                                                   <  5:999554‑M1/149‑27 (MQ=255)
                                                                                                                                                    ggATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                                                                                                                                                                                                                                   >  5:1602841/1‑149 (MQ=255)
                                                                                                                                                              aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGgccggatgcgatgctggcgcatcttgtccggcctac                                                                                                                                                                                                                                         <  7:172871‑M1/149‑37 (MQ=255)
                                                                                                                                                              aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                                                                                                                                                                                                                                         >  8:863299/1‑149 (MQ=255)
                                                                                                                                                              aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                                                                                                                                                                                                                                         >  5:316196/1‑149 (MQ=255)
                                                                                                                                                               cgcgTTTAGCCGAGGATGAAGCAAACGCGTAAAGAAGGGTTGCCGGATGCGGCGAAACCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAAGCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGcc                                                                                                           <  2:248069/274‑1 (MQ=255)
                                                                                                                                                                  gTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                                                                                                                                                                                                                                     >  6:138614/1‑149 (MQ=255)
                                                                                                                                                                   tttAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcccc                                                                                                                                                                                                                                    >  6:1303516/1‑149 (MQ=255)
                                                                                                                                                                   tttAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATAGCATCCGGCACGATcccc                                                                                                                                                                                                                                    >  8:712125/1‑149 (MQ=255)
                                                                                                                                                                        ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAc                                                                                                                                                                                                                               >  8:1505790/1‑149 (MQ=255)
                                                                                                                                                                        ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAc                                                                                                                                                                                                                               >  5:1637461/1‑149 (MQ=255)
                                                                                                                                                                           aGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTg                                                                                                                                                                                                                            <  5:719666/149‑1 (MQ=255)
                                                                                                                                                                            ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTgg                                                                                                                                                                                                                           >  8:909129/1‑149 (MQ=255)
                                                                                                                                                                                gAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGtt                                                                                                                                                                                                                       >  8:18117/1‑149 (MQ=255)
                                                                                                                                                                                  aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTa                                                                                                                                                                                                                     <  6:545563/149‑1 (MQ=255)
                                                                                                                                                                                   gCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCATACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCAcgg                                                                                  <  1:203788/279‑1 (MQ=255)
                                                                                                                                                                                     tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCt                                                                                                                                                                                                                  >  8:259655/1‑149 (MQ=255)
                                                                                                                                                                                     tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCt                                                                                                                                                                                                                  >  7:616896/1‑149 (MQ=255)
                                                                                                                                                                                      aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTg                                                                                                                                                                                                                 <  5:1461561/149‑1 (MQ=255)
                                                                                                                                                                                      aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTg                                                                                                                                                                                                                 <  7:481687/149‑1 (MQ=255)
                                                                                                                                                                                        cgcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGtt                                                                                                                                       >  2:568629/1‑221 (MQ=255)
                                                                                                                                                                                         gcgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGcc                                                                                                                                                                                                              <  8:1078555/149‑1 (MQ=255)
                                                                                                                                                                                          cgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCt                                                                                                                                                                                                             <  7:1322876/149‑1 (MQ=255)
                                                                                                                                                                                          cgTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATTGCTTGCTAACCCACACCGGTTGGCAATCGAATGCTCAACATCATTCCCCACAACCCCTTCATTCCCCGTCCcggcg                                                                                >  4:414992/1‑274 (MQ=255)
                                                                                                                                                                                             aaaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGc                                                                                                                                                                                                          <  5:479994/149‑1 (MQ=255)
                                                                                                                                                                                                gACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCg                                                                                                                                                                                                       >  5:1569029/1‑149 (MQ=255)
                                                                                                                                                                                                  cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGcc                                                                                                                                                                                                     <  6:285522/149‑1 (MQ=255)
                                                                                                                                                                                                  cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGcc                                                                                                                                                                                                     <  8:1415022/149‑1 (MQ=255)
                                                                                                                                                                                                   aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa                                                                                                                                                                                                    >  7:423148/1‑149 (MQ=255)
                                                                                                                                                                                                   aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa                                                                                                                                                                                                    >  7:1468082/1‑149 (MQ=255)
                                                                                                                                                                                                   aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa                                                                                                                                                                                                    <  8:384585/149‑1 (MQ=255)
                                                                                                                                                                                                     gttcacgcgatctgcgAAACCGCTCTATTCGGCTTCCAACGACCACCAACATTACCCACTTAACACACCCGTGGGCCGTACACGTTGCGCAAGCGTACCATCCGGCACGCTCCCCATATCCTGGCGTTAATCTGGCCTTGCTCGCCATACTGTCGATAATCGGCCGATCCGTTTGCTGCATCGAATTGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATGGCCGGTCACGGCGGTATCATCCAgc                                                                    <  4:292359/262‑1 (MQ=255)
                                                                                                                                                                                                            gATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGa                                                                                                                                                                                           >  6:969520/1‑149 (MQ=255)
                                                                                                                                                                                                            gATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGAGGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGa                                                                                                                                                                                           <  7:557379/149‑1 (MQ=255)
                                                                                                                                                                                                             aTGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCAATAATCTTCCGATCCGTTTGCTGCATTGAATGGCtt                                                                                                                                                        >  4:213432/1‑183 (MQ=255)
                                                                                                                                                                                                                cggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATc                                                                                                                                >  3:104855/1‑204 (MQ=255)
                                                                                                                                                                                                                cggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATc                                                                                                                                <  1:104855/204‑1 (MQ=255)
                                                                                                                                                                                                                 ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCTGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTa                                                                                                                                                    <  2:213435/183‑1 (MQ=255)
                                                                                                                                                                                                                 ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcc                                                                                                                                                                                                                                      >  7:360154/1‑101 (MQ=255)
                                                                                                                                                                                                                  gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCt                                                                                                                                                                                     >  7:1016596/1‑149 (MQ=255)
                                                                                                                                                                                                                    gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc                                                                                                                                                                                   >  7:1602715/1‑149 (MQ=255)
                                                                                                                                                                                                                    gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc                                                                                                                                                                                   >  7:1648873/1‑149 (MQ=255)
                                                                                                                                                                                                                       aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                                                                                                                                                                                                                                      >  8:598695/1‑79 (MQ=255)
                                                                                                                                                                                                                       aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGa                                                                                                                                                                                >  5:1378098/1‑149 (MQ=255)
                                                                                                                                                                                                                         cGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATc                                                                                                                                                                              <  5:404808/149‑1 (MQ=255)
                                                                                                                                                                                                                            cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTc                                                                                                                                                                                                        <  6:1117491/120‑1 (MQ=255)
                                                                                                                                                                                                                            cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGt                                                                                                                                                                           >  5:207622/1‑149 (MQ=255)
                                                                                                                                                                                                                             ttATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGtt                                                                                                                                                                          <  6:617409/149‑1 (MQ=255)
                                                                                                                                                                                                                              tATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGt                                                                                                                                                                           >  5:97071/1‑147 (MQ=255)
                                                                                                                                                                                                                                 ccGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgct                                                                                                                                                                      <  8:320485/149‑1 (MQ=255)
                                                                                                                                                                                                                                   ggCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctgc                                                                                                                                                                    <  6:1238190/149‑1 (MQ=255)
                                                                                                                                                                                                                                    gCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCa                                                                                                                                                                   <  6:124095/149‑1 (MQ=255)
                                                                                                                                                                                                                                    gCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcaca                                                                                                                                             <  3:225942/171‑1 (MQ=255)
                                                                                                                                                                                                                                     ccTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCCTCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAAt                                                                                                      >  1:291236/1‑209 (MQ=255)
                                                                                                                                                                                                                                      cTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATc                                                                                                                                                                 >  5:1447022/1‑149 (MQ=255)
                                                                                                                                                                                                                                       tACAAAATCTAACAACATTAACTAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGG                                                                                                                                                                                                                                              >  8:1607348‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                                                       tACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGc                                                                                                                                                                                                      <  8:1248358/111‑1 (MQ=255)
                                                                                                                                                                                                                                       tACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCg                                                                                                                                                                >  6:441232/1‑149 (MQ=255)
                                                                                                                                                                                                                                         cAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa                                                                                                                                                              <  5:1032026/149‑1 (MQ=255)
                                                                                                                                                                                                                                              tCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCt                                                                                                                                                         <  5:1611879/149‑1 (MQ=255)
                                                                                                                                                                                                                                              tCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCACTCGACTGCGCACCATCATGCTCCACACTCCCTTCATTGCCGATCACGGCGGCATCCTCCACCTCCATTAACCCCCCTTTCACCGCAcccacaccactcgccg                            >  4:86388/1‑261 (MQ=255)
                                                                                                                                                                                                                                               ccAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCtt                                                                                                                                                        <  6:877258/149‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacaacATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGAt                                                                                                                                                                               >  5:1238593/1‑124 (MQ=255)
                                                                                                                                                                                                                                                 aacaacATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGc                                                                                                                                                      <  7:1235000/149‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacaacATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGc                                                                                                                                                      >  8:513986/1‑149 (MQ=255)
                                                                                                                                                                                                                                                  acaacaTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGa                                                                                                                              <  4:589818/172‑1 (MQ=255)
                                                                                                                                                                                                                                                    aacaTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAGCCTGGCGTTTATCTGGCCTTGCTCGCCATCATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTaa                                                                                                                                                   <  6:658075/149‑1 (MQ=255)
                                                                                                                                                                                                                                                       cggaaCTAATTAAACAACCCGGAGGCCGGACAAGATGCGCCAGCATCGCGTCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGGTAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCAGGCGCCACAATCCCTTCGTTGCCGGTCACGGCGGTa                                                                             <  4:537016/213‑1 (MQ=255)
                                                                                                                                                                                                                                                        ttAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGca                                                                                                                                               <  8:1016596/149‑1 (MQ=255)
                                                                                                                                                                                                                                                         tAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcac                                                                                                                                              <  6:1568279/149‑1 (MQ=255)
                                                                                                                                                                                                                                                          aaCGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcaca                                                                                                                                             >  5:1255443/1‑149 (MQ=255)
                                                                                                                                                                                                                                                           aCGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTaa                                                                                                                                                   >  5:584908/1‑142 (MQ=255)
                                                                                                                                                                                                                                                              aaTTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAgg                                                                                                                                         >  6:1363907/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                ttAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATcc                                                                                                                                                                             >  7:1484456/1‑111 (MQ=255)
                                                                                                                                                                                                                                                                 tAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTg                                                                                                                                      <  5:938456/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTg                                                                                                                                      <  6:237243/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aaaCAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTgg                                                                                                                                     <  6:1447022/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aacaacCCGTAGGCCAGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGc                                                                                                                                    >  8:1614256/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                      aacCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCtt                                                                                                                                                                                                            >  8:1312172/1‑74 (MQ=255)
                                                                                                                                                                                                                                                                      aacCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTg                                                                                                                                                                                    >  8:462696/1‑98 (MQ=255)
                                                                                                                                                                                                                                                                        cccGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGAc  >  2:17853/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                         ccGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCctacgggttgtttaattcgttaatgttgttggattttgtaggccggctaaggcgttttcgccgcatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgc                                                                                                                              <  7:881502‑M2/149‑112 (MQ=255)
                                                                                                                                                                                                                                                                         ccGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGa                                                                                                                              <  5:1712156/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCctacgggttgtttaattcgttaatgtggttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcg                                                                                                                             <  6:479695‑M2/149‑113 (MQ=255)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                           
CTAGTTGTTTTTACAGGGAGATGATGATGAGTAAAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGAC  >  NC_000913/3255017‑3255554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.