New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3255287NA (NA)5 (0.020) 4/278 NT NA noncoding (71/103 nt) REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3255319 NA (NA)noncoding (103/103 nt) REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 276 total aligned reads displayed.

AAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGACGCACCATCGCAAATCATGCCGCTGACATCGCC  >  NC_000913/3255050‑3255586
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                           
        gCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCAACCGGCACGATCCCCa                                                                                                                                                                                                                                                                   >  2:25748/1‑272 (MQ=255)
           aaaaaGCGCCAGCCGGTGAAGCCCGTGGTGGCGTAAGAACCGGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAACCGCCTTATCCGGCCTACAAAATCCAACAGCATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAcc                                                                                                                                                                                                                                                              <  2:171277/274‑1 (MQ=255)
            aaaaGCGCCAGCCGGGGAAGCCCGGGGAGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGGTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGt                                                                                                                                                                                                                                                        <  1:133921/279‑1 (MQ=255)
                                                                                 aaGAGGTGTTGAGCGAGCTGGAAGGTATCGTGGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGAAAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTg                                                                                                                                                                                       <  4:414481/275‑1 (MQ=255)
                                                                                        agggcaagagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACg                                                                                                                                                                                 <  2:575737/267‑1 (MQ=255)
                                                                                                           aTCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTg                                                                                                                                                                                                                                                            >  4:742903/1‑180 (MQ=255)
                                                                                                               tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGt                                                                                                                                                                                                                                                        <  2:742909/180‑1 (MQ=255)
                                                                                                                          gAAACGCGTTTAGCCGAGGGTGAAGCTACGGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCa                                                                                                                                                                                                                                                                            >  6:1439050/1‑149 (MQ=255)
                                                                                                                            aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCAGGACAAGATGCGCCAGCATCGCATCCGGCACg                                                                                                                                                                                                                                                                          >  7:1652404/1‑149 (MQ=255)
                                                                                                                             aCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGa                                                                                                                                                                                                                                                                         >  5:316196/1‑149 (MQ=255)
                                                                                                                               gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                                                                                                                                                                                                                                                                       >  7:1341022/1‑149 (MQ=255)
                                                                                                                               gcgTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                                                                                                                                                                                                                                                                       <  5:999178/149‑1 (MQ=255)
                                                                                                                                  tttAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATcccc                                                                                                                                                                                                                                                                    >  6:1303516/1‑149 (MQ=255)
                                                                                                                                  tttAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATAGCATCCGGCACGATcccc                                                                                                                                                                                                                                                                    >  8:712125/1‑149 (MQ=255)
                                                                                                                                       ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAc                                                                                                                                                                                                                                                               >  8:1505790/1‑149 (MQ=255)
                                                                                                                                       ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGAATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAc                                                                                                                                                                                                                                                               <  8:1610281/149‑1 (MQ=255)
                                                                                                                                                 aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTa                                                                                                                                                                                                                                                     >  6:897529/1‑149 (MQ=255)
                                                                                                                                                 aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTa                                                                                                                                                                                                                                                     >  6:1143928/1‑149 (MQ=255)
                                                                                                                                                  gccacggaggaaaGACAGGTTCGCGAAGGACGCAAAACCGCCTTATCCCGCCTACAAAACCCAAAAACATTAACGAATTAANCACCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCAcgg                                                                                                                  <  3:221850/269‑1 (MQ=255)
                                                                                                                                                  gCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCATACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCAcgg                                                                                                                  <  1:203788/279‑1 (MQ=255)
                                                                                                                                                    tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCt                                                                                                                                                                                                                                                  <  5:1624424/149‑1 (MQ=255)
                                                                                                                                                     aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTg                                                                                                                                                                                                                                                 <  5:1461561/149‑1 (MQ=255)
                                                                                                                                                     aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTg                                                                                                                                                                                                                                                 <  7:481687/149‑1 (MQ=255)
                                                                                                                                                          gTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCTGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCtt                                                                                                                                                                                                                                            <  8:1228042/149‑1 (MQ=255)
                                                                                                                                                          gTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCtt                                                                                                                                                                                                                                            >  5:98904/1‑149 (MQ=255)
                                                                                                                                                            aaaaACAGGTTGCCGGATGCGGGCAAAACGCCTTATCCGGCCTACAAAACCAAACAACATTAACGAATTAAACACCCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTa                                                                                                             <  4:21943/274‑1 (MQ=255)
                                                                                                                                                            aaaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGc                                                                                                                                                                                                                                          <  5:479994/149‑1 (MQ=255)
                                                                                                                                                               gACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCg                                                                                                                                                                                                                                       >  5:1569029/1‑149 (MQ=255)
                                                                                                                                                                 cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGcc                                                                                                                                                                                                                                     <  6:285522/149‑1 (MQ=255)
                                                                                                                                                                 cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGcc                                                                                                                                                                                                                                     <  8:876316/149‑1 (MQ=255)
                                                                                                                                                                  aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa                                                                                                                                                                                                                                    <  8:384585/149‑1 (MQ=255)
                                                                                                                                                                  aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCa                                                                                                                                                                                                                                    >  7:1468082/1‑149 (MQ=255)
                                                                                                                                                                           gATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGa                                                                                                                                                                                                                           >  6:969520/1‑149 (MQ=255)
                                                                                                                                                                               cggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATc                                                                                                                                                                <  1:104855/204‑1 (MQ=255)
                                                                                                                                                                                ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCTGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTa                                                                                                                                                                                    <  2:213435/183‑1 (MQ=255)
                                                                                                                                                                                ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATc                                                                                                                                                                                                                      <  7:404883/149‑1 (MQ=255)
                                                                                                                                                                                 gcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCt                                                                                                                                                                                                                     >  7:1016596/1‑149 (MQ=255)
                                                                                                                                                                                   gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc                                                                                                                                                                                                                   >  7:1602715/1‑149 (MQ=255)
                                                                                                                                                                                   gAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGc                                                                                                                                                                                                                   <  5:1699015/149‑1 (MQ=255)
                                                                                                                                                                                    aaaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCt                                                                                     <  2:475287/274‑1 (MQ=255)
                                                                                                                                                                                      aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCTTAATCTCGATAATCTGCCGa                                                                                                                                                                                                                <  5:1369394/149‑1 (MQ=255)
                                                                                                                                                                                        cGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATc                                                                                                                                                                                                              <  5:404808/149‑1 (MQ=255)
                                                                                                                                                                                           cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTc                                                                                                                                                                                                                                        >  5:1117491/1‑120 (MQ=255)
                                                                                                                                                                                           cTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGt                                                                                                                                                                                                           >  5:207622/1‑149 (MQ=255)
                                                                                                                                                                                            ttATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGtt                                                                                                                                                                                                          <  8:18199/149‑1 (MQ=255)
                                                                                                                                                                                              aTCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtg                                                                                                                                                                                                        <  7:863299/149‑1 (MQ=255)
                                                                                                                                                                                               tCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgc                                                                                                                                                                                                       <  6:1240290/149‑1 (MQ=255)
                                                                                                                                                                                                  ggCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTtgctgc                                                                                                                                                                                                    <  6:1238190/149‑1 (MQ=255)
                                                                                                                                                                                                   gCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcaca                                                                                                                                                                             >  1:225942/1‑171 (MQ=255)
                                                                                                                                                                                                    ccTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCCTCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAAt                                                                                                                                      >  1:291236/1‑209 (MQ=255)
                                                                                                                                                                                                     cTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATc                                                                                                                                                                                                 >  7:31026/1‑149 (MQ=255)
                                                                                                                                                                                                      tACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGc                                                                                                                                                                                                                                      >  7:1248358/1‑111 (MQ=255)
                                                                                                                                                                                                      tACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCg                                                                                                                                                                                                >  6:441232/1‑149 (MQ=255)
                                                                                                                                                                                                      tACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCg                                                                                                                                                                                                >  5:159475/1‑149 (MQ=255)
                                                                                                                                                                                                        cAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa                                                                                                                                                                                              <  5:1032026/149‑1 (MQ=255)
                                                                                                                                                                                                             tCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCt                                                                                                                                                                                         <  5:1439050/149‑1 (MQ=255)
                                                                                                                                                                                                             tCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCACTCGACTGCGCACCATCATGCTCCACACTCCCTTCATTGCCGATCACGGCGGCATCCTCCACCTCCATTAACCCCCCTTTCACCGCAcccacaccactcgccg                                                            >  4:86388/1‑261 (MQ=255)
                                                                                                                                                                                                              ccAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCtt                                                                                                                                                                                        <  8:331643/149‑1 (MQ=255)
                                                                                                                                                                                                                aacaacATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGAt                                                                                                                                                                                                               >  5:1238593/1‑124 (MQ=255)
                                                                                                                                                                                                                 acaacaTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGa                                                                                                                                                              <  4:589818/172‑1 (MQ=255)
                                                                                                                                                                                                                      cggaaCTAATTAAACAACCCGGAGGCCGGACAAGATGCGCCAGCATCGCGTCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGGTAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCAGGCGCCACAATCCCTTCGTTGCCGGTCACGGCGGTa                                                                                                             <  4:537016/213‑1 (MQ=255)
                                                                                                                                                                                                                      aTTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGc                                                                                                                                                                                >  6:626284/1‑149 (MQ=255)
                                                                                                                                                                                                                       ttAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTAt                                                                                                                                                                                                                                                    >  3:70414/1‑80 (MQ=255)
                                                                                                                                                                                                                       ttAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGca                                                                                                                                                                               <  8:1016596/149‑1 (MQ=255)
                                                                                                                                                                                                                        tAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGcac                                                                                                                                                                              <  6:1568279/149‑1 (MQ=255)
                                                                                                                                                                                                                          aCGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTaa                                                                                                                                                                                   >  5:584908/1‑142 (MQ=255)
                                                                                                                                                                                                                          aCGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAacacacac                                                                                                                                                                            >  8:1309771/1‑149 (MQ=255)
                                                                                                                                                                                                                            gAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAg                                                                                                                                                                          <  8:1628115/149‑1 (MQ=255)
                                                                                                                                                                                                                             aaTTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAgg                                                                                                                                                                         >  6:867391/1‑149 (MQ=255)
                                                                                                                                                                                                                             aaTTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAgg                                                                                                                                                                         >  6:1363907/1‑149 (MQ=255)
                                                                                                                                                                                                                               ttAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGtt                                                                                                                                                                       <  8:1341022/149‑1 (MQ=255)
                                                                                                                                                                                                                               ttAAACAACCCGTAGGCCGGAAAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGCATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCt                                         <  2:118580/275‑1 (MQ=255)
                                                                                                                                                                                                                                tAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTg                                                                                                                                                                      <  5:938456/149‑1 (MQ=255)
                                                                                                                                                                                                                                 aaaCAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTgg                                                                                                                                                                     >  6:1713250/1‑149 (MQ=255)
                                                                                                                                                                                                                                     aacCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTg                                                                                                                                                                                                                    >  8:462696/1‑98 (MQ=255)
                                                                                                                                                                                                                                         cGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCctacgggttgtttaattcgttaatgtggttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcg                                                                                                                                                             <  6:479695‑M2/149‑113 (MQ=255)
                                                                                                                                                                                                                                          gTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa                                                                                                                                                                                              >  8:605162/1‑115 (MQ=255)
                                                                                                                                                                                                                                          gTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGaa                                                                                                                                                                                              <  7:605162/115‑1 (MQ=255)
                                                                                                                                                                                                                                             ggCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCt                                                                                                                                                                                         >  5:645364/1‑117 (MQ=255)
                                                                                                                                                                                                                                              gCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTc                                                                                                                                                        <  8:304235/149‑1 (MQ=255)
                                                                                                                                                                                                                                                  gACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAca                                                                                                                                                    >  7:937113/1‑149 (MQ=255)
                                                                                                                                                                                                                                                  gACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAca                                                                                                                                                    <  7:743672/149‑1 (MQ=255)
                                                                                                                                                                                                                                                  gACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAca                                                                                                                                                    <  6:668776/149‑1 (MQ=255)
                                                                                                                                                                                                                                                  gACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAca                                                                                                                                                    >  7:1487405/1‑149 (MQ=255)
                                                                                                                                                                                                                                                    cAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAcatc                                                                                                                                                  <  5:1309783/149‑1 (MQ=255)
                                                                                                                                                                                                                                                    cAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAcatc                                                                                                                                                  <  7:18117/149‑1 (MQ=255)
                                                                                                                                                                                                                                                     aaGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAAcatca                                                                                                                                                 >  7:112407/1‑149 (MQ=255)
                                                                                                                                                                                                                                                       gATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATg                                                                                                                                               >  7:887047/1‑149 (MQ=255)
                                                                                                                                                                                                                                                        aTGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATgc                                                                                                                                              <  6:98904/149‑1 (MQ=255)
                                                                                                                                                                                                                                                              cAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCcaca                                                                                                                                        >  8:541000/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCcaca                                                                                                                                        >  5:95316/1‑149 (MQ=255)
                                                                                                                                                                                                                                                              cAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTACTGCATCGAATGGCTTGCTAACGCACACAGGTTGCCAATCGACTGCTCAACATCATGCGCcaca                                                                                                                                        >  8:945045/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                 catcgcatcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATc                                                                                                                                     <  8:1468082/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                 catcgcatcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAAGCGCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGACGCACCATCGCAAATCATGCCGCTGACa       <  2:346969/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cgcatcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCt                                                                                                                                  <  6:1602841/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      catcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTc                                                                                                                                <  6:1059940/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                      catcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGACGCACCATCGCAAATCATGCCGCTGACATCGcc  <  2:92268/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                       atcCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACt                                                                                                                                                            >  8:792455/1‑120 (MQ=255)
                                                                                                                                                                                                                                                                        tcCGGCctacgggttgtttaattcgttaatgttgttggattttgtaggccggataaggcgttttcgcctcatccggcaacctgtctttacgcggtagcttcatcctcggctaaacgcgtttcagcatccgcgacgatagcttccagctc                                                                                                                              <  6:581065‑M2/149‑144 (MQ=255)
                                                                                                                                                                                                                                                                         ccGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCAtt                                                                                                                             <  7:541000/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                           
AAAAATTGGCCAAAAAGCGCCAGCCGGTGAAGCCCGTGGTGGCGAAAGAACCTGCTCGCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCTGGCCTTGCTCGCCATAATCTCGATAATCTGCCGATCCGTTTGCTGCATCGAATGGCTTGCTAACGCACACAGGTTGGCAATCGACTGCTCAACATCATGCGCCACAATCCCTTCATTGCCGGTCACGGCGGTATCATCCAGCGCCATTAACACCGCTTTCCACGCAGCCGAAGCACTGGTCGAAACCTTCATCGCGCAGCTGTTCGACGCACCATCGCAAATCATGCCGCTGACATCGCC  >  NC_000913/3255050‑3255586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.