BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1203761	180 (0.980)	12 (0.070)	9/240	NT	6.5%	coding (494/558 nt)	ymfL	e14 prophage; putative DNA‑binding transcriptional regulator
*	?	NC_000913	= 1203775	175 (1.020)	12 (0.070)	9/240	NT	6.5%	coding (508/558 nt)	ymfL	e14 prophage; putative DNA‑binding transcriptional regulator

Only 100 of 244 total aligned reads displayed.

ATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATG  >  NC_000913/1203616‑1203909

    gTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAgtgt                                                                                                                                               <  3:1670573/149‑1 (MQ=255)

    gTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAgtgt                                                                                                                                               <  3:461460/149‑1 (MQ=255)

     ttCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGtgtg                                                                                                                                              >  2:296975/1‑149 (MQ=255)

     ttCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGtgtg                                                                                                                                              >  2:1665726/1‑149 (MQ=255)

     ttCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGtgtg                                                                                                                                              >  2:1415427/1‑149 (MQ=255)

     ttCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGtgtg                                                                                                                                              >  2:1157461/1‑149 (MQ=255)

     ttCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGtgtg                                                                                                                                              >  1:420862/1‑149 (MQ=255)

      tCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGc                                                                                                                                             <  4:1268636/149‑1 (MQ=255)

        aGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAg                                                                                                                                           >  1:1218796/1‑149 (MQ=255)

         gCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGc                                                                                                                                          >  4:887173/1‑149 (MQ=255)

           aaTCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTc                                                                                                                                        >  3:481991/1‑149 (MQ=255)

            aTCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCc                                                                                                                                       <  2:864744‑M2/149‑2 (MQ=255)

            aTCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCc                                                                                                                                       <  2:909734‑M2/149‑2 (MQ=255)

             tCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCcg                                                                                                                                      <  2:890921‑M2/149‑3 (MQ=255)

               gAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCcggg                                                                                                                                    >  3:423877‑M2/1‑145 (MQ=255)

               gAAGACGGTGCAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGgagctgcacactcgcggg                                                                                                                                    <  2:353518‑M1/149‑19 (MQ=255)

                  gACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCcgggcgt                                                                                                                                 <  2:778800‑M2/149‑8 (MQ=255)

                        gtAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGc                                                                                                                           <  3:398075/149‑1 (MQ=255)

                         tAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAACGACGCCCGgagctgcacactcgcgggcgtcattact                                                                                                                          <  3:1432131‑M1/149‑29 (MQ=255)

                               aaCCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGAtt                                                                                                                    <  1:980297/149‑1 (MQ=255)

                                 ccGCATGAGAATACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGc                                                                                                                  >  3:1457923/1‑149 (MQ=255)

                                  cGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCt                                                                                                                 >  2:1083862/1‑149 (MQ=255)

                                   gCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCtt                                                                                                                >  4:1415078/1‑149 (MQ=255)

                                       gagaAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTc                                                                                                               <  4:439370/146‑1 (MQ=255)

                                         gaagaCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGtt                                                                                                          <  1:1665726/149‑1 (MQ=255)

                                          aagaCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGt                                                                                                                         <  1:283530/133‑1 (MQ=255)

                                          aagaCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTtg                                                                                                         >  2:620945/1‑149 (MQ=255)

                                              cAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGga                                                                                                     >  1:214138/1‑149 (MQ=255)

                                                gCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGgaga                                                                                                   >  2:998924/1‑149 (MQ=255)

                                                 cAATTAACGCCGAGCTGTATCTCTCAATTTCGAGGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTACTGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaa                                                                                                  <  1:1018331/149‑1 (MQ=255)

                                                   aTTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAAc                                                                                                <  2:666260/149‑1 (MQ=255)

                                                         gacgaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGc                                                                                          >  4:523227/1‑149 (MQ=255)

                                                          acgaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCa                                                                                         >  4:323293/1‑149 (MQ=255)

                                                           cgaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCAt                                                                                        <  3:1415078/149‑1 (MQ=255)

                                                            gaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATg                                                                                       >  3:110470/1‑149 (MQ=255)

                                                               cTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAAc                                                                                    >  3:93796/1‑149 (MQ=255)

                                                                tGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGAGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACa                                                                                   <  4:978539/149‑1 (MQ=255)

                                                                  tATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGt                                                                                 <  1:753752/149‑1 (MQ=255)

                                                                   aTCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGtt                                                                                <  3:441885/149‑1 (MQ=255)

                                                                   aTCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGtt                                                                                <  4:1250084/149‑1 (MQ=255)

                                                                      tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaaa                                                                                                 <  4:165436/129‑1 (MQ=255)

                                                                      tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaaa                                                                                                 >  3:165436/1‑129 (MQ=255)

                                                                       ctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaac                                                                            <  1:794543/149‑1 (MQ=255)

                                                                        tcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaaca                                                                           >  3:1252249/1‑149 (MQ=255)

                                                                           aTTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGttt                                                                               >  3:625735/1‑142 (MQ=255)

                                                                           aTTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAacaaca                                                                        <  1:437258/149‑1 (MQ=255)

                                                                            tttCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCGTTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGTGCGTCGTGGCGTCGATTGCTCCTGGTTGTGGAGAAACTAACGCATGATCAGTTTAACAacac                                                                       >  1:1515359/1‑149 (MQ=255)

                                                                                     tGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtc                                                              <  3:253787/149‑1 (MQ=255)

                                                                                     tGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtc                                                              >  1:1398379/1‑149 (MQ=255)

                                                                                         ggAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtcgctc                                                          <  2:1502028/149‑1 (MQ=255)

                                                                                         ggAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtcgctc                                                          <  4:1573834/149‑1 (MQ=255)

                                                                                         ggAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtcgctc                                                          <  4:567103/149‑1 (MQ=255)

                                                                                            gCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCa                                                       >  4:1463881/1‑149 (MQ=255)

                                                                                             cATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCaa                                                      <  4:708549/149‑1 (MQ=255)

                                                                                                 cagcaCTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGa                                                  >  2:132552/1‑149 (MQ=255)

                                                                                                   gcaCTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGAtt                                                <  3:667453/149‑1 (MQ=255)

                                                                                                     aCTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTgc                                              <  2:743597/149‑1 (MQ=255)

                                                                                                      cTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTgcg                                             <  4:426518/149‑1 (MQ=255)

                                                                                                          tCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTc                                         <  3:1298870/149‑1 (MQ=255)

                                                                                                            tACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                             >  4:465503/1‑111 (MQ=255)

                                                                                                              cAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGt                                     >  2:1558327/1‑149 (MQ=255)

                                                                                                                aaaTTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTAc                                   >  1:122342/1‑149 (MQ=255)

                                                                                                                aaaTTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTAc                                   >  4:1191543/1‑149 (MQ=255)

                                                                                                                     ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGc                                                                                          >  1:560474/1‑89 (MQ=255)

                                                                                                                     ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGc                                                                                          <  2:560474/89‑1 (MQ=255)

                                                                                                                     ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGt                              <  1:1356639/149‑1 (MQ=255)

                                                                                                                     ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCCTCCTGTACCGGGt                              <  2:214138/149‑1 (MQ=255)

                                                                                                                      tttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTg                             <  3:90079/149‑1 (MQ=255)

                                                                                                                      tttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCATCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTg                             <  4:1549519/149‑1 (MQ=255)

                                                                                                                         gCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGaa                          <  4:168916/149‑1 (MQ=255)

                                                                                                                         gCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGaa                          >  2:391005/1‑149 (MQ=255)

                                                                                                                           aTTTCAGAAAGTAATGACGCCCGcgagtgtgcagctccaggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcattaattgctgtcttctcatgcg                        >  4:1391639‑M1/1‑23 (MQ=255)

                                                                                                                            tttCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAg                       >  3:1270063/1‑149 (MQ=255)

                                                                                                                            tttCAGAAAGTAATGACGCCAGTGAGTGAGCAGCTCCGGGTGTCGTGGAGTCAATTGCTTCTAGTTGTGGAGAAACGAAAGCACGAACAGTTTAACAACACAATACCGTCGCTCGCAACTGATTGCGCTTCCTTTACCGGGTGGAAAAg                       <  2:1437307/149‑1 (MQ=255)

                                                                                                                                aGAAAGTAATGACGCCCGcgagtgtgcagctccgggcgtcgttactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttcc                   >  3:1077346‑M1/1‑18 (MQ=255)

                                                                                                                                aGAAAGTAATGACGCCCGcgagtgtgcagctccgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagaga                                                          <  2:351439‑M1/110‑93 (MQ=255)

                                                                                                                                   aaGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGt                <  1:67290/149‑1 (MQ=255)

                                                                                                                                    aGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTg               <  3:323293/149‑1 (MQ=255)

                                                                                                                                    aGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTg               <  1:1033350/149‑1 (MQ=255)

                                                                                                                                      tAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGa             >  2:752750/1‑149 (MQ=255)

                                                                                                                                       aaTGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGaa            <  4:1032857/149‑1 (MQ=255)

                                                                                                                                        aTGACGCCCGCGAGTGTGCAGCTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcttgctcctgcagcttcgaaattgagagatccagctcgtcgttaattgctgtcttctcatgcggttccactccacc           <  2:806252‑M2/149‑126 (MQ=255)

                                                                                                                                        aTGACGCCCGCGAGTGTGCAGCTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacacc           <  3:751065‑M2/149‑126 (MQ=255)

                                                                                                                                        aTGACGCCCGCGAGTGTGCAGCTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacacc           <  3:1470411‑M2/149‑126 (MQ=255)

                                                                                                                                          gACGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagctgcgaaattgagagatacagctcgtcgttaattgctgtcttgtcatgcggttccactacaccgt         >  4:1129090‑M1/1‑8 (MQ=255)

                                                                                                                                          gACGCCCGCGAGTGTGCAGCTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgt         <  3:775571‑M2/149‑128 (MQ=255)

                                                                                                                                           aCGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtc        <  1:492073‑M1/149‑143 (MQ=255)

                                                                                                                                           aCGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtc        <  3:461243‑M1/149‑143 (MQ=255)

                                                                                                                                            cGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgcgagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtct       <  1:1502028‑M1/149‑144 (MQ=255)

                                                                                                                                            cGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtct       <  2:1356639‑M1/149‑144 (MQ=255)

                                                                                                                                            cGCCCGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtct       <  2:881942‑M1/149‑144 (MQ=255)

                                                                                                                                              cccGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCt     <  4:263791/149‑1 (MQ=255)

                                                                                                                                               ccGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcg    >  1:890921‑M1/1‑3 (MQ=255)

                                                                                                                                               ccGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcg    >  1:477405‑M1/1‑3 (MQ=255)

                                                                                                                                               ccGCGAGTGTGCAGCTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcg    <  1:1021329‑M2/149‑133 (MQ=255)

                                                                                                                                               ccGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTa    >  3:594263/1‑149 (MQ=255)

                                                                                                                                                cgcgAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTAt   <  2:1031295/149‑1 (MQ=255)

                                                                                                                                                cGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcga   <  1:61995‑M1/149‑148 (MQ=255)

                                                                                                                                                cGgagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcga   <  2:477405‑M1/149‑148 (MQ=255)

                                                                                                                                                 ggagctgcacactcgcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgtcttcgat  <  4:66116‑M1/149‑149 (MQ=255)

ATTCGTTCAGCAATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAGCTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATG  >  NC_000913/1203616‑1203909

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.