New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1203761180 (0.980)12 (0.070) 9/240 NT 6.5% coding (494/558 nt) ymfL e14 prophage; putative DNA‑binding transcriptional regulator
?NC_000913 = 1203775 175 (1.020)coding (508/558 nt) ymfL e14 prophage; putative DNA‑binding transcriptional regulator

Only 100 of 222 total aligned reads displayed.

AATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCA  >  NC_000913/1203627‑1203923
                                                                                                                                                     |                                                                                                                                                    
aaTCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACTCCCGCGAGTGTGCAG‑CTc                                                                                                                                                      >  4:873579/1‑149 (MQ=255)
aaTCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTc                                                                                                                                                      >  3:481991/1‑149 (MQ=255)
  tCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCcg                                                                                                                                                    <  2:890921‑M2/149‑3 (MQ=255)
   cGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCcgg                                                                                                                                                   >  1:477405‑M2/1‑146 (MQ=255)
    gAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCcggg                                                                                                                                                  >  3:423877‑M2/1‑145 (MQ=255)
      aGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCGCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCcgggcg                                                                                                                                                <  1:1502028‑M2/149‑7 (MQ=255)
                gTGGAACCGCATGAGAAGACAGCAATTAACTACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGTATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTc                                                                                                                                      >  2:42087/1‑149 (MQ=255)
                gTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTc                                                                                                                                      >  4:1298870/1‑149 (MQ=255)
                  ggAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGa                                                                                                                                    <  2:1406728/149‑1 (MQ=255)
                  ggAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGa                                                                                                                                    <  3:189762/149‑1 (MQ=255)
                  ggAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCGCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGc                                                                                                                                         <  1:1424419/144‑1 (MQ=255)
                   gAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGAt                                                                                                                                   >  1:540469/1‑149 (MQ=255)
                      ccGCATGAGAATACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGc                                                                                                                                >  3:1457923/1‑149 (MQ=255)
                            gagaAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTc                                                                                                                             >  3:439370/1‑146 (MQ=255)
                            gagaAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTc                                                                                                                             <  4:439370/146‑1 (MQ=255)
                             agaagaCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGt                                                                                                                         <  3:346440/149‑1 (MQ=255)
                                agaCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTtgt                                                                                                                      <  2:540469/149‑1 (MQ=255)
                                  aCAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTgg                                                                                                                    <  3:678376/149‑1 (MQ=255)
                                   cAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGga                                                                                                                   >  1:214138/1‑149 (MQ=255)
                                     gCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGgaga                                                                                                                 >  2:753752/1‑149 (MQ=255)
                                     gCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGgaga                                                                                                                 >  2:998924/1‑149 (MQ=255)
                                      cAATTAACGCCGAGCTGTATCTCTCAATTTCGAGGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTACTGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaa                                                                                                                <  1:1018331/149‑1 (MQ=255)
                                       aaTTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACACCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaaa                                                                                                               >  2:1251077/1‑149 (MQ=255)
                                            acgacgAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAAc                                                                                                          <  2:1356345/149‑1 (MQ=255)
                                               acgaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCa                                                                                                       >  4:323293/1‑149 (MQ=255)
                                                cgaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCAt                                                                                                      <  3:1415078/149‑1 (MQ=255)
                                                 gaGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATg                                                                                                     >  1:1031295/1‑149 (MQ=255)
                                                    cTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAAc                                                                                                  >  3:93796/1‑149 (MQ=255)
                                                     tGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGAGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACa                                                                                                 <  4:978539/149‑1 (MQ=255)
                                                       tATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGt                                                                                               <  1:998924/149‑1 (MQ=255)
                                                        aTCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGtt                                                                                              <  4:1250084/149‑1 (MQ=255)
                                                        aTCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGtt                                                                                              >  4:1191627/1‑149 (MQ=255)
                                                         tctctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCG‑GAGC‑TGCACACTCgcgggcgtcattactttct                                                                                                                                   >  1:351439‑M2/1‑91 (MQ=255)
                                                          ctctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGtt                                                                                              <  4:253905/147‑1 (MQ=255)
                                                           tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGaaa                                                                                                               >  3:165436/1‑129 (MQ=255)
                                                           tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           >  4:1536629/1‑149 (MQ=255)
                                                           tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           >  1:469128/1‑149 (MQ=255)
                                                           tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           >  1:583434/1‑149 (MQ=255)
                                                           tctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           <  2:653703/149‑1 (MQ=255)
                                                            ctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaac                                                                                          >  3:865516/1‑149 (MQ=255)
                                                            ctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           <  2:1053399/148‑1 (MQ=255)
                                                            ctcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTCTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTACTTCTGGTTGTGGAGAATCTAACGCATGAACAGTTTaac                                                                                          <  2:109026/149‑1 (MQ=255)
                                                             tcAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaaca                                                                                         >  3:1252249/1‑149 (MQ=255)
                                                              cAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGGCGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaacaa                                                                                        <  2:716553/149‑1 (MQ=255)
                                                                aTTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGttt                                                                                             <  4:625735/142‑1 (MQ=255)
                                                                aTTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAacaaca                                                                                      <  3:66116/149‑1 (MQ=255)
                                                                 tttCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCGTTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGTGCGTCGTGGCGTCGATTGCTCCTGGTTGTGGAGAAACTAACGCATGATCAGTTTAACAacac                                                                                     >  1:1515359/1‑149 (MQ=255)
                                                                          tGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtc                                                                            <  3:253787/149‑1 (MQ=255)
                                                                            cAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtcgc                                                                          <  3:457443/149‑1 (MQ=255)
                                                                              ggAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGtcgctc                                                                        <  2:1502028/149‑1 (MQ=255)
                                                                                 gCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCa                                                                     >  4:1463881/1‑149 (MQ=255)
                                                                                  cATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCaa                                                                    >  1:825132/1‑149 (MQ=255)
                                                                                  cATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCaa                                                                    <  4:708549/149‑1 (MQ=255)
                                                                                       agcaCTTGCCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGAt                                                               >  3:1554500/1‑149 (MQ=255)
                                                                                           cTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTgcg                                                           <  4:426518/149‑1 (MQ=255)
                                                                                            ttGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTtgt                                                                                                                      >  2:747350/1‑89 (MQ=255)
                                                                                            ttGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTtgt                                                                                                                      <  1:747350/89‑1 (MQ=255)
                                                                                               tCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTc                                                       >  2:926055/1‑149 (MQ=255)
                                                                                               tCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTc                                                       <  3:1280388/149‑1 (MQ=255)
                                                                                                cTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTcc                                                      <  1:778800/149‑1 (MQ=255)
                                                                                                 tACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           <  3:465503/111‑1 (MQ=255)
                                                                                                 tACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTaa                                                                                           >  4:465503/1‑111 (MQ=255)
                                                                                                  aCAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTg                                                    >  1:1242103/1‑149 (MQ=255)
                                                                                                     aaaTTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTg                                                                                                                           >  3:1422280/1‑75 (MQ=255)
                                                                                                          ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGt                                            <  1:244715/149‑1 (MQ=255)
                                                                                                          ttttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCCTCCTGTACCGGGt                                            <  2:214138/149‑1 (MQ=255)
                                                                                                           tttGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTg                                           <  3:90079/149‑1 (MQ=255)
                                                                                                              gCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGaa                                        >  1:1220246/1‑149 (MQ=255)
                                                                                                              gCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGaa                                        <  4:168916/149‑1 (MQ=255)
                                                                                                                 tttCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAg                                     >  4:1642893/1‑149 (MQ=255)
                                                                                                                 tttCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAg                                     >  3:1270063/1‑149 (MQ=255)
                                                                                                                 tttCAGAAAGTAATGACGCCAGTGAGTGAGCAG‑CTCCGGGTGTCGTGGAGTCAATTGCTTCTAGTTGTGGAGAAACGAAAGCACGAACAGTTTAACAACACAATACCGTCGCTCGCAACTGATTGCGCTTCCTTTACCGGGTGGAAAAg                                     <  2:1437307/149‑1 (MQ=255)
                                                                                                                     aGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGaa                                 <  1:881942/149‑1 (MQ=255)
                                                                                                                      gAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAg                                >  2:1580656/1‑149 (MQ=255)
                                                                                                                      gAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAg                                >  2:874953/1‑149 (MQ=255)
                                                                                                                      gAAAGTAATGACGCCCGCGACTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAg                                >  1:1368910/1‑149 (MQ=255)
                                                                                                                       aaaGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAgg                               >  3:112195/1‑149 (MQ=255)
                                                                                                                         tgTAATGACGCCCGCGAGTGTGAAG‑TTCCGGGCGTCGTGGCGTCGATTGCTGCTGGTTGTGGAGAAACTAACTCATGAACAGTTTAACAACCCACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTg                             <  4:52575/148‑1 (MQ=255)
                                                                                                                         aGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTg                             <  3:619899/149‑1 (MQ=255)
                                                                                                                           tAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACCGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGa                           >  4:1566054/1‑149 (MQ=255)
                                                                                                                            aaTGACGCCCGCGAGTGTGCAG‑CTCcgggcgtcgttactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacac                          <  2:330970‑M2/149‑125 (MQ=255)
                                                                                                                            aaTGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGaa                          <  2:37305/149‑1 (MQ=255)
                                                                                                                             aTGACGCCCGCGAGTGTGCAG‑CTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcttgctcctgcagcttcgaaattgagagatccagctcgtcgttaattgctgtcttctcatgcggttccactccacc                         <  2:806252‑M2/149‑126 (MQ=255)
                                                                                                                               gACGCCCGCGAGTGTGCAG‑CTCcgggcgtcattactttctgaaatgcaaaaaattttgtagacaagtgctgcatgctcctgcagcttcgaaattgagagatacagctcgtcgttaattgctgtcttctcatgcggttccactacaccgt                       <  3:775571‑M2/149‑128 (MQ=255)
                                                                                                                                aCGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATAtt                      <  4:481991/149‑1 (MQ=255)
                                                                                                                                   cccGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCt                   <  4:112195/149‑1 (MQ=255)
                                                                                                                                   cccGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCt                   <  4:263791/149‑1 (MQ=255)
                                                                                                                                     cgcgAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTAt                 <  2:1031295/149‑1 (MQ=255)
                                                                                                                                          gtgtGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGt            <  2:1220246/149‑1 (MQ=255)
                                                                                                                                          gtgtGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGt            <  1:637857/149‑1 (MQ=255)
                                                                                                                                             tgCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGaa         <  4:10231/149‑1 (MQ=255)
                                                                                                                                             tgCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGaa         <  2:61995/149‑1 (MQ=255)
                                                                                                                                              gCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTaa                                                                                                           >  3:258270/1‑50 (MQ=255)
                                                                                                                                              gCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGt            >  1:1684266/1‑145 (MQ=255)
                                                                                                                                              gCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGt            <  2:1684266/145‑1 (MQ=255)
                                                                                                                                               cAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATg       <  4:1402610/149‑1 (MQ=255)
                                                                                                                                                   cTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATAtt                      >  1:1042272/1‑131 (MQ=255)
                                                                                                                                                   cTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTAc    <  1:1106499/149‑1 (MQ=255)
                                                                                                                                                    tCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTAcc   >  4:1585067/1‑149 (MQ=255)
                                                                                                                                                    tCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTAcc   >  3:1085973/1‑149 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AATCGAAGACGGTGTAGTGGAACCGCATGAGAAGACAGCAATTAACGACGAGCTGTATCTCTCAATTTCGAAGCTGCAGGAGCATGCAGCACTTGTCTACAAAATTTTTTGCATTTCAGAAAGTAATGACGCCCGCGAGTGTGCAG‑CTCCGGGCGTCGTGGCGTCGATTGCTTCTGGTTGTGGAGAAACTAACGCATGAACAGTTTAACAACACACTACCGTCGCTCGCAACTGATTGCGCTTCCTGTACCGGGTGGAAAAGCGAAGGTGGAATATTGCTATGCAGTGAATGTACCA  >  NC_000913/1203627‑1203923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.