New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3982351 =95 (0.920)3 (0.030) 3/250 NT 3.2% intergenic (+79/‑24) yifK/argX putative APC family amino acid transporter/tRNA‑Arg
?NC_000913 3982397 = 88 (0.890)noncoding (23/77 nt) argX tRNA‑Arg
Rejected: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

AAGCGCATAAACTGGAGGAATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTG  >  NC_000913/3982250‑3982545
                                                                                                                                                   |                                                                                                                                                    
aaGCGCATAAACTGGAGGAATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATaga                                                                                                                                                     >  4:415631/1‑149 (MQ=255)
         aaCTGGAGGAATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGccc                                                                                                                                            <  1:563626/149‑1 (MQ=255)
              gaggaATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCgg                                                                                                                                       >  2:70887/1‑149 (MQ=255)
               aggaATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGa                                                                                                                                      <  1:495473/149‑1 (MQ=255)
                     aaGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCaga                                                                                                                                >  2:264944/1‑149 (MQ=255)
                         agcaAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGtc                                                                                                                            >  4:701472/1‑149 (MQ=255)
                         agcaAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGACAGAGGtc                                                                                                                            >  4:426055/1‑149 (MQ=255)
                           caAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGtctc                                                                                                                          <  3:749564/149‑1 (MQ=255)
                           caAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGtctc                                                                                                                          <  3:551133/149‑1 (MQ=255)
                            aaaaCGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCa                                                                                                                         <  4:368174/149‑1 (MQ=255)
                             aaaCGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAg                                                                                                                        <  4:449162/149‑1 (MQ=255)
                             aaaCGCACAAACCGTAACCAAACGCGCAATATATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAg                                                                                                                        <  1:606729/149‑1 (MQ=255)
                              aaCGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAgg                                                                                                                       >  4:307545/1‑149 (MQ=255)
                                  cacaAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCg                                                                                                                   >  4:272751/1‑149 (MQ=255)
                                        ccGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCt                                                                                                             >  1:279658/1‑149 (MQ=255)
                                           tAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTc                                                                                                          <  2:915999/149‑1 (MQ=255)
                                           tAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTc                                                                                                          >  4:873445/1‑149 (MQ=255)
                                                aaaCGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGgcg                                                                                                     >  4:617103/1‑149 (MQ=255)
                                                 aaCGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGgcgc                                                                                                    <  3:634248/149‑1 (MQ=255)
                                                      gcAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCAt                                                                                               >  1:300441/1‑149 (MQ=255)
                                                      gcAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCAt                                                                                               >  2:505463/1‑149 (MQ=255)
                                                       cAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCAtt                                                                                              >  1:778059/1‑149 (MQ=255)
                                                       cAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCAtt                                                                                              >  4:137289/1‑149 (MQ=255)
                                                          tttatttaAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAg                                                                                           >  3:140724/1‑149 (MQ=255)
                                                          tttatttaAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAg                                                                                           >  4:402151/1‑149 (MQ=255)
                                                                 aaaaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGgc                                                                                    >  3:657509/1‑149 (MQ=255)
                                                                  aaaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGgcg                                                                                   >  3:801703/1‑149 (MQ=255)
                                                                   aaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAgc                                                                                                                                                   >  3:741123/1‑84 (MQ=255)
                                                                   aaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAgc                                                                                                                                                   <  4:741123/84‑1 (MQ=255)
                                                                   aaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGgcgc                                                                                  <  3:49603/149‑1 (MQ=255)
                                                                   aaaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGgcgc                                                                                  >  2:435403/1‑149 (MQ=255)
                                                                    aaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCt                                                                                 <  3:581974/149‑1 (MQ=255)
                                                                    aaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCt                                                                                 <  1:275768/149‑1 (MQ=255)
                                                                    aaGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCt                                                                                 <  3:327978/149‑1 (MQ=255)
                                                                     aGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCtt                                                                                <  3:415631/149‑1 (MQ=255)
                                                                      gggACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTg                                                                               >  2:159191/1‑149 (MQ=255)
                                                                         aCTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGc                                                                            <  2:873642/149‑1 (MQ=255)
                                                                              aCAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCgg                                                                       <  2:146590/149‑1 (MQ=255)
                                                                               cAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCggt                                                                      <  2:615255/149‑1 (MQ=255)
                                                                                agagGGGTGGGAAGTCCGTGTTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCggtg                                                                     >  1:208848/1‑149 (MQ=255)
                                                                                agagGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCggtg                                                                     <  3:414945/149‑1 (MQ=255)
                                                                                   ggggTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  >  3:327913/1‑149 (MQ=255)
                                                                                   ggggTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  <  1:494090/149‑1 (MQ=255)
                                                                                   ggggTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  <  2:179894/149‑1 (MQ=255)
                                                                                   ggggTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  <  1:70887/149‑1 (MQ=255)
                                                                                       tGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTaa                                                              <  2:891807/149‑1 (MQ=255)
                                                                                           aaGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATAcc                                                          >  2:404231/1‑149 (MQ=255)
                                                                                             gTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  <  1:408202/139‑1 (MQ=255)
                                                                                             gTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgc                                                        >  2:795364/1‑149 (MQ=255)
                                                                                             gTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgc                                                        <  1:904908/149‑1 (MQ=255)
                                                                                             gTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCAGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGgta                                                                  >  2:408202/1‑139 (MQ=255)
                                                                                              tCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgcg                                                       >  1:288674/1‑149 (MQ=255)
                                                                                              tCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgcg                                                       >  4:827847/1‑149 (MQ=255)
                                                                                              tCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgcg                                                       >  3:197287/1‑149 (MQ=255)
                                                                                              tCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACcgcg                                                       >  1:252659/1‑149 (MQ=255)
                                                                                                 gctctatccagctgagctacgggcgcttagcgccgttgcgggggtggataGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTaa                                                    >  4:632742‑M2/51‑149 (MQ=255)
                                                                                                 gTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTaa                                                    >  4:867870/1‑149 (MQ=255)
                                                                                                  tattatCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAAc                                                   >  2:155958/1‑149 (MQ=255)
                                                                                                  tattatCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAAc                                                   >  4:334434/1‑149 (MQ=255)
                                                                                                  tattatCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAAc                                                   >  3:175105/1‑149 (MQ=255)
                                                                                                    ttatCCACCTCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACaa                                                 >  2:905545/1‑149 (MQ=255)
                                                                                                     tatccagctgagctacgggcgcttagcgccgttgcgggggtggataGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTcc                                                                                        >  3:249097‑M2/47‑109 (MQ=255)
                                                                                                      ATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATa                                                            <  1:130947‑M1/136‑1 (MQ=255)
                                                                                                      ATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGa                                               >  4:175105‑M1/1‑149 (MQ=255)
                                                                                                       TCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAt                                              <  4:441566‑M1/149‑1 (MQ=255)
                                                                                                       TCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAt                                              <  4:459761‑M1/149‑1 (MQ=255)
                                                                                                        CCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTa                                                                                            >  1:624594‑M1/1‑102 (MQ=255)
                                                                                                        CCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAtt                                             <  3:701344‑M1/149‑1 (MQ=255)
                                                                                                        CCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGATGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTa                                                                                            <  2:624594‑M1/102‑1 (MQ=255)
                                                                                                         CACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAttt                                            >  2:54253‑M1/1‑149 (MQ=255)
                                                                                                         CACCCCCGCAACGGCGCTAAGCGCCCGTAGCCCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAttt                                            <  3:75057‑M1/149‑1 (MQ=255)
                                                                                                          ACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTg                                           >  1:899222‑M1/1‑149 (MQ=255)
                                                                                                           cccccGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGt                                          <  3:657450/149‑1 (MQ=255)
                                                                                                            ccccGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTa                                         >  1:256838/1‑149 (MQ=255)
                                                                                                               cGCAACGGCGCTAAGCGCCCGTAGCTCAGGTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGAGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACCAGATTTGTAgtg                                      <  1:105213/149‑1 (MQ=255)
                                                                                                               cGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAgtg                                      <  1:435403/149‑1 (MQ=255)
                                                                                                                gCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTaa                                                              <  3:720486/124‑1 (MQ=255)
                                                                                                                gCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTaa                                                              >  4:720486/1‑124 (MQ=255)
                                                                                                                gCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAgtgg                                     <  1:505463/149‑1 (MQ=255)
                                                                                                                  aaCGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAgtggtg                                   <  1:883537/149‑1 (MQ=255)
                                                                                                                      gcgcTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCta                               <  3:913892/149‑1 (MQ=255)
                                                                                                                             gcgcCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCa                        <  1:227338/149‑1 (MQ=255)
                                                                                                                             gcgcCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCa                        <  1:737191/149‑1 (MQ=255)
                                                                                                                                 ccGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGTATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAg                       >  1:603476/1‑146 (MQ=255)
                                                                                                                                 ccGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAg                       <  2:603476/146‑1 (MQ=255)
                                                                                                                                   gTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGt                  >  2:264366/1‑149 (MQ=255)
                                                                                                                                       cTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTagag              <  3:459761/149‑1 (MQ=255)
                                                                                                                                        tCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGc                                 <  1:927916/129‑1 (MQ=255)
                                                                                                                                        tCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGc                                 >  2:927916/1‑129 (MQ=255)
                                                                                                                                        tCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGc             >  4:320594/1‑149 (MQ=255)
                                                                                                                                        tCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGc             >  2:584347/1‑149 (MQ=255)
                                                                                                                                          aGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGccc           >  2:697958/1‑149 (MQ=255)
                                                                                                                                          aGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGccc           >  2:741969/1‑149 (MQ=255)
                                                                                                                                           gCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTg                    >  4:194949/1‑139 (MQ=255)
                                                                                                                                           gCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTg                    <  3:194949/139‑1 (MQ=255)
                                                                                                                                           gCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCt          <  1:354038/149‑1 (MQ=255)
                                                                                                                                             tggataGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGAtt                                             <  2:671347‑M2/106‑1 (MQ=255)
                                                                                                                                              ggataGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGa       <  4:140724‑M2/144‑1 (MQ=255)
                                                                                                                                              ggataGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGa       >  3:78208‑M2/6‑149 (MQ=255)
                                                                                                                                                 taGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGATtg    <  2:432132‑M2/147‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAGCGCATAAACTGGAGGAATAAGCAGCAAAACGCACAAACCGTAACCAAACGCGCAATTTATTTAAAAAGGGACTAGACAGAGGGGTGGGAAGTCCGTATTATCCACCCCCGCAACGGCGCTAAGCGCCCGTAGCTCAGCTGGATAGAGCGCTGCCCTCCGGAGGCAGAGGTCTCAGGTTCGAATCCTGTCGGGCGCGCCATTTAGTCCCGGCGCTTGAGCTGCGGTGGTAGTAATACCGCGTAACAAGATTTGTAGTGGTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTG  >  NC_000913/3982250‑3982545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.