Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 1,293,015 IS1 (–) +8 bp 7.5% intergenic (‑93/‑505) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)14 (0.070) 14/298 NT 8.6% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293022 141 (0.780)intergenic (‑100/‑505) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 = 258675NA (NA)9 (0.050) 9/298 NT 5.7% noncoding (1/768 nt) IS1 repeat region
?NC_000913 1293015 = 141 (0.780)intergenic (‑93/‑512) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

Only 100 of 202 total aligned reads displayed.

TACGAGTGCGCTCTTCAACTTCAGCAGCAGCCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTG  >  NC_000913/1292754‑1293288
                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                          
tACGAGTGCGCGCTTCAACTTCAGCAGCAGCCGCGCTTTCTTCTTCGCGACATTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTGCAGTTGTACATTCTCTTGCCTGCGCACGCAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTACTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTACTAATAGAGCCTTAAATTCCGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAACTTattatt                                                                                                                                                                                                                                                                       >  1:161357/1‑274 (MQ=255)
        cgcTCTTCAACTTCAGCAGCAGCCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTAAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                                                                                                                                               >  4:432165/1‑274 (MQ=255)
        cgcTCTTCAACTTCAGCAGCAGCCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGGAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgtg                                                                                                                                                                                                                                                              >  4:646851/1‑275 (MQ=255)
                                                  cgttcgttAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                                                                    <  4:133629/275‑1 (MQ=255)
                                                  cgttagttAACAAAAACGTCTAAGTTTTCCATCATTTCTTCTAGCGTTTCAAGGGTACATTATCTTGACTGCGCAAGNAGAGGACGGATTTTGTTCAGATGTTTAAGTGCTTCGCTCATTGTAGTAATCGAAAATATATAGTGGGCTGGTTTGTTGCGGGAAGAATAGAGCCTTAAATTCATTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAACTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcg                                                                                                                                                                                                                    <  3:161357/275‑1 (MQ=255)
                                                                                          ccAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAACGATGATTTCGCAGCACg                                                                                                                                                                            >  2:466784/1‑275 (MQ=255)
                                                                                                           cATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatga                                                                                                                                                                                                                                                                    <  2:732359‑M2/170‑9 (MQ=255)
                                                                                                               ctctTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatgactcc                                                                                                                                                                                                                                                                >  4:732359‑M2/1‑158 (MQ=255)
                                                                                                                          gcACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGtt                                                                                                                                                                                                                                                                          <  7:848681/149‑1 (MQ=255)
                                                                                                                           cACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTc                                                                                                                                                                                                                                                                         <  5:893907/149‑1 (MQ=255)
                                                                                                                            aCGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCt                                                                                                                                                                                                                                                                        <  6:1079784/149‑1 (MQ=255)
                                                                                                                            aCGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCt                                                                                                                                                                                                                                                                        <  5:1050359/149‑1 (MQ=255)
                                                                                                                            aCGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCt                                                                                                                                                                                                                                                                        >  8:1074630/1‑149 (MQ=255)
                                                                                                                                  agTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAttt                                                                                                                                                                                                                                                                  <  5:1081679/149‑1 (MQ=255)
                                                                                                                                       ggATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGtt                                                                                                                                                                                                                                                                          <  7:800825/136‑1 (MQ=255)
                                                                                                                                       ggATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGtt                                                                                                                                                                                                                                                                          >  8:800825/1‑136 (MQ=255)
                                                                                                                                            ttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatgactccaacttatt                                                                                                                                                                                                                                                        >  7:580900‑M2/1‑129 (MQ=255)
                                                                                                                                              gttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGCTTCATGTCCCATTTTATGGGGAGCTTATCGTAg                                                                                                                        >  4:307614/1‑275 (MQ=255)
                                                                                                                                               ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaata                                                                                                                                                                                                                                                     >  8:948132/1‑149 (MQ=255)
                                                                                                                                                tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatgactccaacttattgata                                                                                                                                                                                                                                                    <  7:662658‑M2/149‑25 (MQ=255)
                                                                                                                                                 cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGAACGTGCGGGTAAAACTTCCTGATTAAGGTCACATTTTATGGGGAGATTAACGTAGGCt                                                                                                                     >  4:183200/1‑275 (MQ=255)
                                                                                                                                                  aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataaat                                                                                                                                                                                                                                                  <  8:757256/149‑1 (MQ=255)
                                                                                                                                                  aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataaat                                                                                                                                                                                                                                                  >  6:785371/1‑149 (MQ=255)
                                                                                                                                                  aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCaataaat                                                                                                                                                                                                                                                  >  7:718887/1‑149 (MQ=255)
                                                                                                                                                      ttttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATCGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCt                                                                                                                                                                                                                                              >  8:749274/1‑149 (MQ=255)
                                                                                                                                                           aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGACGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCttt                                                                                                           <  2:427090/275‑1 (MQ=255)
                                                                                                                                                            gTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCAt                                                                                                                                                                                                                                        >  5:718851/1‑149 (MQ=255)
                                                                                                                                                                ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                                                                                                                                                    >  5:1055151/1‑149 (MQ=255)
                                                                                                                                                                ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                                                                                                                                                    >  5:348838/1‑149 (MQ=255)
                                                                                                                                                                   gCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                                                                                                                                                 <  8:468579/149‑1 (MQ=255)
                                                                                                                                                                     tCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                                                                                                                                               <  8:591191/149‑1 (MQ=255)
                                                                                                                                                                           tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAtttt                                                                                                                                                                                                                                                                 >  7:544056/1‑109 (MQ=255)
                                                                                                                                                                           tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAg                                                                                           <  2:646851/275‑1 (MQ=255)
                                                                                                                                                                              taATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGa                                                                                                                                                                                                                      <  5:299692/149‑1 (MQ=255)
                                                                                                                                                                               aaTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGACAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAc                                                                                                                                                                                                                     <  7:106403/149‑1 (MQ=255)
                                                                                                                                                                                 tctcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                                                                                                                                         >  2:259944/1‑223 (MQ=255)
                                                                                                                                                                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                                                                                                                                                         <  1:48535‑M2/157‑68 (MQ=255)
                                                                                                                                                                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAtt                                                                                                                                                                                                                                                                   >  5:932757/1‑99 (MQ=255)
                                                                                                                                                                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgtg                                                                                                                                                                                                                                                              >  4:748976/1‑104 (MQ=255)
                                                                                                                                                                                   tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                                                                                                                                                 >  8:1059342/1‑149 (MQ=255)
                                                                                                                                                                                     aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                                                                             <  4:411232‑M1/231‑72 (MQ=255)
                                                                                                                                                                                     aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtg                                                                                                                                                                                            >  2:137457‑M1/1‑160 (MQ=255)
                                                                                                                                                                                     aaaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                                                                                                                                     <  4:259944/223‑1 (MQ=255)
                                                                                                                                                                                      aaCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCat                                                                                                                                                                                                              <  8:718887/149‑1 (MQ=255)
                                                                                                                                                                                       aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccgc                                                                                                                                                                                                                                                          <  2:748976/104‑1 (MQ=255)
                                                                                                                                                                                       aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                                                                                                                             >  6:230118/1‑149 (MQ=255)
                                                                                                                                                                                              ttGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCt                                                                                                                                                                                                      >  5:825339/1‑149 (MQ=255)
                                                                                                                                                                                                ggggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAt                                                                                                                                                                                                    <  7:610983/149‑1 (MQ=255)
                                                                                                                                                                                                 gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAg                                                                                                                                                                                                                       >  1:111766/1‑129 (MQ=255)
                                                                                                                                                                                                   gtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                                                                                                                                                 >  2:506517/1‑133 (MQ=255)
                                                                                                                                                                                                    cagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTac                                                                                                                                                                                                >  6:685428‑M2/66‑149 (MQ=255)
                                                                                                                                                                                                      gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                                                                                                                              <  7:98913/149‑1 (MQ=255)
                                                                                                                                                                                                      gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAg                                                                >  2:195967/1‑275 (MQ=255)
                                                                                                                                                                                                      gtTAGTTGAGGTACTAATAGAGCCTTAAATTCAGTTGTGAAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTTTTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCAAGAAAAGACGCGGCATATAGACATATTTacac                                                                                                                                                                                              >  6:85779/1‑149 (MQ=255)
                                                                                                                                                                                                        ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtg                                                                                                                                                                                            <  7:1059342‑M1/149‑9 (MQ=255)
                                                                                                                                                                                                          gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                                                                                                                                          <  8:895883/149‑1 (MQ=255)
                                                                                                                                                                                                          gttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                                                                                                                                          <  6:984398/149‑1 (MQ=255)
                                                                                                                                                                                                            tgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtgcgaa                                                                                                                                                                                        <  6:280945‑M1/149‑13 (MQ=255)
                                                                                                                                                                                                               ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAttt                                                                                                                                                                                     <  7:293599/149‑1 (MQ=255)
                                                                                                                                                                                                               ggTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGAttt                                                                                                                                                                                     >  5:477014/1‑149 (MQ=255)
                                                                                                                                                                                                                gTAATAATAGCGCCTTAACTTCAGTTGTGCTATAGCCAGGAATGTATGGTCTTCAAAATTGTTCTTTATTTTGTGCCGCCCCTAAATATCTTTTCATAAAATTAGCCAGATAAGGCGCGGCATCTCGCCCTCTTTACACCGATGATTTc                                                                                                                                                                                    >  8:288090/1‑149 (MQ=255)
                                                                                                                                                                                                                gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCAt                                                                                                                                                                                                                                        >  2:546886/1‑97 (MQ=255)
                                                                                                                                                                                                                gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACCTTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAAtgatga                                                      >  2:405028/1‑275 (MQ=255)
                                                                                                                                                                                                                    taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATaaaa                                                                                                                                                                                                                                    <  4:546886/97‑1 (MQ=255)
                                                                                                                                                                                                                       taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAAGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                                                                                                                                             <  6:1008462/149‑1 (MQ=255)
                                                                                                                                                                                                                         gagCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCGGCACGt                                                                                                                                                                           <  6:930005/149‑1 (MQ=255)
                                                                                                                                                                                                                          agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                                                                                                                                                          >  7:32099‑M2/1‑51 (MQ=255)
                                                                                                                                                                                                                          agCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGaa                                             >  2:61941/1‑274 (MQ=255)
                                                                                                                                                                                                                           gCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCgg                                                                                                                                                                                                                 >  2:342475/1‑109 (MQ=255)
                                                                                                                                                                                                                              ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGATAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                                                                                                                                      >  5:208881/1‑149 (MQ=255)
                                                                                                                                                                                                                              ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                                                                                                                                   >  8:565881/1‑104 (MQ=255)
                                                                                                                                                                                                                              ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                                                                                                                                   <  7:565881/104‑1 (MQ=255)
                                                                                                                                                                                                                               tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgtg                                                                                                                                                                                                                                                              >  4:679629/1‑60 (MQ=255)
                                                                                                                                                                                                                               tAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                                                                                                                             <  4:342475/109‑1 (MQ=255)
                                                                                                                                                                                                                                   ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccgc                                                                                                                                                                                                                                                          <  2:679629/60‑1 (MQ=255)
                                                                                                                                                                                                                                   ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt                                                                                                                     <  2:567920/193‑1 (MQ=255)
                                                                                                                                                                                                                                   tcatacactaaatcagtaagttggcagcatcaccCAAAATTGTTCTTTATTTTGTGCCGCCaataaata                                                                                                                                                                                                                                                 >  4:473677‑M2/35‑69 (MQ=255)
                                                                                                                                                                                                                                    tatgTTGTGCAAAAGCCAGGGATGAAAGGAATTCAAAATTGTTCTTGATTTTGTTCCGCCCATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCGATTTGCCCCGATGATTTCGCAGGACGTGAGGTTAAAACTTCCTGATTCATGTCACAGTTTATGAGTAGATTATCGTAGGCTGACGACATTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATa                                  <  4:29454/272‑1 (MQ=255)
                                                                                                                                                                                                                                    tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                                                                <  5:802255‑M1/149‑37 (MQ=255)
                                                                                                                                                                                                                                    catacactaaatcagtaagttggcagcatcaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGc                                                                                                                                                                                                         <  4:577055‑M2/75‑1 (MQ=255)
                                                                                                                                                                                                                                      aGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                                                              >  7:494538‑M1/1‑111 (MQ=255)
                                                                                                                                                                                                                                       gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                                                                                                                                             <  8:529324/149‑1 (MQ=255)
                                                                                                                                                                                                                                          gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                                                                                                                                          >  6:955524/1‑149 (MQ=255)
                                                                                                                                                                                                                                          gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTg                                                                                                                                                          <  8:474052/149‑1 (MQ=255)
                                                                                                                                                                                                                                           tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                                                                                                                                         >  6:503029/1‑149 (MQ=255)
                                                                                                                                                                                                                                           taaatcagtaagttggcagcatcaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCa                                                                                                         >  3:94043‑M2/27‑197 (MQ=255)
                                                                                                                                                                                                                                            gCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTa                                                                                  <  2:300412/219‑1 (MQ=255)
                                                                                                                                                                                                                                               tcagtaagttggcagcatcaccCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtct                                                                                                     <  1:94043‑M2/175‑1 (MQ=255)
                                                                                                                                                                                                                                                tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCAt                                                                                                                                                    <  5:503029/149‑1 (MQ=255)
                                                                                                                                                                                                                                                 aGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATg                                                                                                                                                   <  6:1055151/149‑1 (MQ=255)
                                                                                                                                                                                                                                                  gCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                                                                                                                                                  >  5:970813/1‑149 (MQ=255)
                                                                                                                                                                                                                                                   ccAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                                                                                                                                                 >  8:19058/1‑149 (MQ=255)
                                                                                                                                                                                                                                                          tGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtttt                                                                                                                                          >  5:311626/1‑149 (MQ=255)
                                                                                                                                                                                                                                                           gTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTa                                                                                                                                         <  7:19058/149‑1 (MQ=255)
                                                                                                                                                                                                                                                            tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaaa                                                                                                                                                                 >  8:306189/1‑124 (MQ=255)
                                                                                                                                                                                                                                                                   ttCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga                                                                                                                                 >  5:173226/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                      aaaaTTTGTCTTTATTTTTGGCCGAANANAAATATCTTTTCATAAAATTAGCCAGAAAAGGCGCTGCATATATCNCTATTTACACCGATGATTTCGCAGCACGTGATGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGANATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTg  <  3:52897/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aaTTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATc                                                                                                                            <  7:438661/149‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aaTTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGt                                                                                                       >  3:39177/1‑170 (MQ=255)
                                                                                                                                                                                                                                                                            gTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGtcttc                                                                                                   <  1:39177/170‑1 (MQ=255)
                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                          
TACGAGTGCGCTCTTCAACTTCAGCAGCAGCCGCGCTTTCTTCTTCGCGACGTTCGTTAACAACAACTTCTAATTTTTCCAGCATTTCTTCCAGCGTTTCAAGTGTACATTCTCTTGCCTGCGCACGAAGAGTACGGATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTG  >  NC_000913/1292754‑1293288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.