| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4412327 = | 121 (0.650) | 13 (0.070) | 11/226 | NT | 9.9% | coding (349/399 nt) | yjfL | UPF0719 family inner membrane protein |
| ? | NC_000913 | 4412348 = | 122 (0.690) | coding (370/399 nt) | yjfL | UPF0719 family inner membrane protein | |||||
GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4412479‑4412327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCAC > NC_000913/4412348‑4412495 GCACGGTTCAAAAGGATTATTCGGTCTACCAACGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGG < 2:349337/149‑1 CACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC < 4:1376926/149‑1 CACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGC > 1:909390/1‑149 TTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATA < 1:1320255/96‑1 TTAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATA > 2:1320255/1‑96 TAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAAC < 2:437522/80‑1 TAAAAATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAAC > 1:437522/1‑80 AATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTT > 2:186904/1‑146 AATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTT < 1:186904/146‑1 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTT > 2:1603466/1‑146 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTT < 1:1603466/146‑1 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATT > 4:489733/1‑125 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATT < 3:489733/125‑1 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGG < 4:41562/103‑1 ATACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGG > 3:41562/1‑103 TACCGCCAGCCAGCGCGGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAAC > 3:196421/1‑149 GGCGGTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTA < 4:94349/149‑1 GTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAGTAACAGTAAAATTGGTCACGGAGCGA < 3:1107123/93‑1 GTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAGTAACAGTAAAATTGGTCACGGAGCGA > 4:1107123/1‑93 GTATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCA > 3:997438/1‑149 TATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCAC < 4:1592131/149‑1 TATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTA > 2:961682/1‑144 TATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTA < 1:961682/144‑1 TATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGC > 1:1247615/1‑100 TATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGC < 2:1247615/100‑1 GCACGGTTCAAAAGGATTATTCGGTCTACCAATGCGACTAATCGCTCCGTGACCAATTTTACTGTTATTTCTTGATTTGCGTTTTCTGGCCATGATCGTCCATTACCATGTCATACAAGCTGCGTTAAAAATACCGCCAGCCAGCGCGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4412479‑4412327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggtATTTTTAACGCAGCTTGTATGACATGGTAATGGACGATCATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATTAGTCGCATTGGTAGACCGAATAATCCTTTTGAACCGTGCCGCAATCGCTACGCAC > NC_000913/4412348‑4412495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |