New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40362672 (0.390)4 (0.020) 4/220 NT 5.0% intergenic (+25/‑77) psiF/yaiC PsiF family protein/diguanylate cyclase, cellulose regualtor
?NC_000913 = 403636 85 (0.490)intergenic (+35/‑67) psiF/yaiC PsiF family protein/diguanylate cyclase, cellulose regualtor

Only 100 of 116 total aligned reads displayed.

GAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTA  >  NC_000913/403479‑403774
                                                                                                                                                   |                                                                                                                                                    
gAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCt                                                                                                                                                     >  4:90635/1‑149 (MQ=255)
  aaaaaGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTAc                                                                                                                                                   <  4:1529675/149‑1 (MQ=255)
  aaaaaGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTAc                                                                                                                                                   <  4:384744/149‑1 (MQ=255)
       gTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGaaaa                                                                                                                                              <  4:1547328/149‑1 (MQ=255)
        tttGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAAt                                                                                                                                             <  3:1803331/149‑1 (MQ=255)
        tttGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAAt                                                                                                                                             <  3:977050/149‑1 (MQ=255)
          tGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGg                                                                                                                                           >  3:1801189‑M2/1‑148 (MQ=255)
          tGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGg                                                                                                                                           >  2:861831‑M2/1‑148 (MQ=255)
            aCGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGgct                                                                                                                                         >  4:626702‑M2/1‑146 (MQ=255)
              gCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGgctca                                                                                                                                       <  3:1720081‑M2/149‑6 (MQ=255)
               ccACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGgctcac                                                                                                                                      >  4:52719‑M2/1‑143 (MQ=255)
               ccACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGgctcac                                                                                                                                      <  3:52719‑M2/149‑7 (MQ=255)
                            aGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATa                                                                                                                         <  4:1720081/149‑1 (MQ=255)
                             gATGCGCGAATGCAATAATCAAGCTACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGC                                                                                                                                                      >  2:1716589‑M1/1‑119 (MQ=255)
                             gATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTAc                                                                                                                                                   <  2:772615/122‑1 (MQ=255)
                                       tGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCttt                                                                                                              <  2:576028/149‑1 (MQ=255)
                                       tGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCttt                                                                                                              <  3:90635/149‑1 (MQ=255)
                                            taatCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTc                                                                                                         >  2:1705064/1‑149 (MQ=255)
                                               tCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGg                                                                                                                                           >  2:586262‑M2/1‑111 (MQ=255)
                                               tCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGg                                                                                                                                           <  1:586262‑M2/112‑2 (MQ=255)
                                                  aGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACg                                                                                                                                                  >  2:906843/1‑102 (MQ=255)
                                                  aGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACg                                                                                                                                                  <  1:906843/102‑1 (MQ=255)
                                                    caacacaacaATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCta                                                                                                 >  3:13544/1‑149 (MQ=255)
                                                        acaacaATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAAt                                                                                             >  4:838794/1‑149 (MQ=255)
                                                            caaTCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATa                                                                                                                         <  1:551590/117‑1 (MQ=255)
                                                            caaTCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATa                                                                                                                         >  2:551590/1‑117 (MQ=255)
                                                             aaTCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCa                                                                                                                           >  4:1488704/1‑114 (MQ=255)
                                                             aaTCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCa                                                                                                                           <  3:1488704/114‑1 (MQ=255)
                                                                 tctGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGc                                                                                                                  >  2:736384/1‑119 (MQ=255)
                                                                 tctGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGc                                                                                                                  <  1:736384/119‑1 (MQ=255)
                                                                 tctGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGaaaa                                                                                    <  1:1705064/149‑1 (MQ=255)
                                                                  ctGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCtt                                                                                                               >  3:215554/1‑121 (MQ=255)
                                                                  ctGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCtt                                                                                                               <  4:215554/121‑1 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATg                                                                                                                                            >  1:1793518/1‑91 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATc                                                                                                                            >  1:1442552/1‑107 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATc                                                                                                                            <  2:1442552/107‑1 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCtat                                                                                                <  1:632560/135‑1 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCtat                                                                                                >  2:632560/1‑135 (MQ=255)
                                                                   tGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAAtt                                                                                  >  3:1532526/1‑149 (MQ=255)
                                                                            atgatCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGc                                                                                                                  <  4:1337609/108‑1 (MQ=255)
                                                                               atCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGgctcaccc                                                                                                                                    <  4:718182‑M2/87‑9 (MQ=255)
                                                                               atCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATaa                                                                                              <  3:992260/125‑1 (MQ=255)
                                                                               atCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAAtt                                                                                  >  2:1835587/1‑137 (MQ=255)
                                                                               atCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAAtt                                                                                  <  1:1835587/137‑1 (MQ=255)
                                                                               atCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGt                                                                      >  1:1833983/1‑149 (MQ=255)
                                                                                 cGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTc                                                                    <  3:838794/149‑1 (MQ=255)
                                                                                    aataaGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCa                                                                 >  1:878120/1‑149 (MQ=255)
                                                                                     ataaGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCaa                                                                >  1:838593/1‑149 (MQ=255)
                                                                                          tttATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCcattttcgtagctcaccc                                                                                                                                    >  2:669221‑M1/1‑58 (MQ=255)
                                                                                          tttATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCcattttcgtagctcaccc                                                                                                                                    <  1:669221‑M1/76‑19 (MQ=255)
                                                                                           ttATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAaataa                                                          <  2:838593/149‑1 (MQ=255)
                                                                                             aTGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATaatg                                                        >  2:1806331/1‑149 (MQ=255)
                                                                                                aGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATaatgaat                                                     <  2:1833983/149‑1 (MQ=255)
                                                                                                  tgcctgccTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAatgaatga                                                   <  4:13544/149‑1 (MQ=255)
                                                                                                     ctgcctCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTcc                                                                   >  3:1034799/1‑130 (MQ=255)
                                                                                                       gcctCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            >  1:807905/1‑119 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCcattttcgtagctca                                                                                                                                       <  1:1574619‑M1/57‑16 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCcattttcgtagctca                                                                                                                                       >  2:1574619‑M1/1‑42 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGtc                                                                                                     <  3:946231/91‑1 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGtc                                                                                                     >  4:946231/1‑91 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAaataa                                                          <  3:201107/134‑1 (MQ=255)
                                                                                                          tCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAaataa                                                          >  4:201107/1‑134 (MQ=255)
                                                                                                           cAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            <  2:1241941/115‑1 (MQ=255)
                                                                                                           cAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            >  1:1241941/1‑115 (MQ=255)
                                                                                                           cAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTccc                                                                  >  3:534790/1‑125 (MQ=255)
                                                                                                           cAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTccc                                                                  <  4:534790/125‑1 (MQ=255)
                                                                                                            aaGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATaatgaat                                                     >  1:1716840/1‑137 (MQ=255)
                                                                                                            aaGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATaatgaat                                                     <  2:1716840/137‑1 (MQ=255)
                                                                                                             aGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            >  3:1774304/1‑113 (MQ=255)
                                                                                                             aGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            <  4:1774304/113‑1 (MQ=255)
                                                                                                                            acctgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCaaaaaacgaaatc                         >  3:661132/1‑142 (MQ=255)
                                                                                                                              ctgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAatgaatga                                                   >  4:767621/1‑121 (MQ=255)
                                                                                                                              ctgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAatgaatga                                                   <  3:767621/121‑1 (MQ=255)
                                                                                                                              ctgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAgcggcggcg                       >  3:1706343/1‑149 (MQ=255)
                                                                                                                               tgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAgcgg                            <  1:1146424/143‑1 (MQ=255)
                                                                                                                               tgataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAgcgg                            >  2:1146424/1‑143 (MQ=255)
                                                                                                                                 ataGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATaatgaat                                                     <  4:1760285/116‑1 (MQ=255)
                                                                                                                                     tGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACgggg                >  3:160960/1‑149 (MQ=255)
                                                                                                                                           cGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAc          <  4:1532526/149‑1 (MQ=255)
                                                                                                                                           cGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAAc          <  4:160960/149‑1 (MQ=255)
                                                                                                                                            gggTGAGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgat                                                                       >  3:718182‑M1/1‑8 (MQ=255)
                                                                                                                                            gggTGAGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgat                                                                       <  4:718182‑M1/87‑80 (MQ=255)
                                                                                                                                            gggTGAGCTACGAAAATGgctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaa                                                                                  >  2:669221‑M2/1‑18 (MQ=255)
                                                                                                                                            gggTGAGCTACGAAAATGgctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaa                                                                                  <  1:669221‑M2/76‑59 (MQ=255)
                                                                                                                                              gTGAGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtgg       >  4:52719‑M1/1‑6 (MQ=255)
                                                                                                                                              gTGAGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtgg       <  3:52719‑M1/149‑144 (MQ=255)
                                                                                                                                               tGAGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtggc      <  3:1720081‑M1/149‑145 (MQ=255)
                                                                                                                                               tGAGCTACGAAAATGgctcacccgttagcactatcaggtatcaggcggctttcttga                                                                                                  >  2:1574619‑M2/1‑15 (MQ=255)
                                                                                                                                               tGAGCTACGAAAATGgctcacccgttagcactatcaggtatcaggcggctttcttga                                                                                                  <  1:1574619‑M2/57‑43 (MQ=255)
                                                                                                                                               tGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAatgaatga                                                   >  1:1672111/1‑104 (MQ=255)
                                                                                                                                               tGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAatgaatga                                                   <  2:1672111/104‑1 (MQ=255)
                                                                                                                                                gAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACttt                                         <  4:559683/113‑1 (MQ=255)
                                                                                                                                                gAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACttt                                         >  3:559683/1‑113 (MQ=255)
                                                                                                                                                 aGCcattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtggcgt    >  4:626702‑M1/1‑3 (MQ=255)
                                                                                                                                                 aGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCtt    <  2:878120/149‑1 (MQ=255)
                                                                                                                                                  gCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCCCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            >  1:265674/1‑76 (MQ=255)
                                                                                                                                                  gCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCCCCGTCTCTATAATTTGGGAAAATTGTTTCt                                                                            <  2:265674/76‑1 (MQ=255)
                                                                                                                                                   ccattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtggcgtca  >  2:861831‑M1/1‑1 (MQ=255)
                                                                                                                                                   ccattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttgattattgcattcgcgcatcttttgctgctgtggcgtca  >  3:1801189‑M1/1‑1 (MQ=255)
                                                                                                                                                   ccattttcgtagctcacccgttagcactatcaggtatcaggcggctttcttgaggcaggcactcataaacttattacgatcatcacctttcagagattgttgtgttgcttga                                       <  1:586262‑M1/112‑112 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GAAAAAAGTTTGACGCCACAGCAGCAAAAGATGCGCGAATGCAATAATCAAGCAACACAACAATCTCTGAAAGGTGATGATCGTAATAAGTTTATGAGTGCCTGCCTCAAGAAAGCCGCCTGATACCTGATAGTGCTAACGGGTGAGCTACGAAAATGGCTCACCCGAAATATCATACTTCTGCCTTTAGCTCCGTCTCTATAATTTGGGAAAATTGTTTCTGAATGTTCCCAAAAATAATGAATGATGAAAACTTTTTCAAAAAAGCGGCGGCGCACGGGGAGGAACCTCCTTTA  >  NC_000913/403479‑403774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.