| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2204447 = | 44 (0.240) | 9 (0.050) | 9/216 | NT | 20.0% | intergenic (+158/‑149) | yehK/yehL | uncharacterized protein/putative hexameric AAA+ MoxR family ATPase |
| ? | NC_000913 | 2204492 = | 32 (0.190) | intergenic (+203/‑104) | yehK/yehL | uncharacterized protein/putative hexameric AAA+ MoxR family ATPase | |||||
AATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAA > NC_000913/2204299‑2204592 | acagcagcaggcggacgctgcagatgattattctgcggtgacatatattcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca > 2:1101048‑M1/149‑149 (MQ=255)acagcagcaggcggacgctgcagatgattattctgcggtgacatatattcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca > 3:1856486‑M1/149‑149 (MQ=255)aataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATa < 1:915484/149‑1 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATa > 4:462530/1‑144 (MQ=255) ttCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATa < 3:462530/144‑1 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc > 1:1224728/1‑149 (MQ=255) gATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc < 2:1291757/149‑1 (MQ=255) aaCGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagca > 1:362949/1‑149 (MQ=255) cccAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt > 1:1043960/1‑149 (MQ=255) cccAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt > 1:1710945/1‑149 (MQ=255) cccAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttt > 3:972915/1‑149 (MQ=255) cggtgacatatattcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt > 1:514666‑M1/114‑149 (MQ=255) cAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt < 2:362949/149‑1 (MQ=255) aaTGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt > 1:1481804/1‑149 (MQ=255) ggCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttat < 2:1043960/149‑1 (MQ=255) ggCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttat < 4:972915/149‑1 (MQ=255) ggCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttat < 2:1710945/149‑1 (MQ=255) atatattcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattta < 3:259299‑M1/43‑1 (MQ=255) atatattcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattta > 4:259299‑M1/107‑149 (MQ=255) ttcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca < 1:1743069‑M1/1‑1 (MQ=255) ttcatccctgaaatgtattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca > 2:1743069‑M1/102‑102 (MQ=255) taAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc < 2:1481804/149‑1 (MQ=255) aaaTCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCt < 2:1224728/149‑1 (MQ=255) tctcATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttat < 4:995942/134‑1 (MQ=255) tctcATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttat > 3:995942/1‑134 (MQ=255) aTTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGtaaataa > 4:1627349/1‑99 (MQ=255) aTTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGtaaataa < 3:1627349/99‑1 (MQ=255) tattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATaaaa > 4:1834553‑M1/87‑97 (MQ=255) tattaatgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATaaaa < 3:1834553‑M1/11‑1 (MQ=255) atgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTAc > 4:692080‑M1/82‑125 (MQ=255) atgaaataaacgatattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTAc < 3:692080‑M1/44‑1 (MQ=255) aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATa > 2:770983/1‑77 (MQ=255) aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATa < 1:770983/77‑1 (MQ=255) aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt < 4:401556/108‑1 (MQ=255) aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt > 3:401556/1‑108 (MQ=255) atattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca < 4:455884‑M1/1‑1 (MQ=255) atattttacgcgcaataaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcaca > 3:455884‑M1/70‑70 (MQ=255) cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg > 1:163188/1‑149 (MQ=255) cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg > 1:301785/1‑149 (MQ=255) gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc < 2:163188/149‑1 (MQ=255) aaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta < 3:270737‑M1/39‑1 (MQ=255) aaatgtttggcgcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta > 4:270737‑M1/54‑92 (MQ=255) ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt > 1:1612069/1‑149 (MQ=255) ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt < 2:1612069/149‑1 (MQ=255) gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat > 2:949311/1‑112 (MQ=255) gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat < 1:949311/112‑1 (MQ=255) gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt < 2:301785/149‑1 (MQ=255) ttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGaa > 3:1320432/1‑58 (MQ=255) ttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGaa < 4:1320432/58‑1 (MQ=255) ttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc > 3:895930/1‑149 (MQ=255) gcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttt > 1:1673233‑M1/43‑77 (MQ=255) gcattagttgtttgagcgaaaaatatctggaaagcagatcacAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttt < 2:1673233‑M1/35‑1 (MQ=255) aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaa > 1:673996/1‑149 (MQ=255) cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc < 1:801253/127‑1 (MQ=255) cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc > 2:801253/1‑127 (MQ=255) gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc > 4:185456/1‑124 (MQ=255) gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc < 3:185456/124‑1 (MQ=255) tGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCg > 1:1587565/1‑149 (MQ=255) ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt < 2:673996/149‑1 (MQ=255) cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAt < 2:1587565/149‑1 (MQ=255) ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac > 1:586958/1‑95 (MQ=255) ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac < 2:586958/95‑1 (MQ=255) ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt > 2:373932/1‑127 (MQ=255) ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt < 1:373932/127‑1 (MQ=255) cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTGTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACAtt < 3:1602740/143‑1 (MQ=255) cTGAAAACAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACAtt > 4:1602740/1‑143 (MQ=255) aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGaa < 4:895930/149‑1 (MQ=255) | AATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAA > NC_000913/2204299‑2204592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |