New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2204447 =	44 (0.240)	9 (0.050)	9/216	NT	20.0%	intergenic (+158/‑149)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
	?	NC_000913	2204492 =	32 (0.190)					intergenic (+203/‑104)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase

TAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCTGTG  >  NC_000913/2204349‑2204640                                                                                                                                                |                                                                                                                                                     taAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc                                                                                                                                                 <  2:1481804/149‑1 (MQ=255)  aaaTCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCt                                                                                                                                                <  2:1224728/149‑1 (MQ=255)                                    cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                                                                                                              >  1:163188/1‑149 (MQ=255)                                    cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                                                                                                              >  1:301785/1‑149 (MQ=255)                                     gTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                                                                                             <  2:163188/149‑1 (MQ=255)                                               ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt                                                                                                   <  2:1612069/149‑1 (MQ=255)                                               ttcgttcgTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAtt                                                                                                   >  1:1612069/1‑149 (MQ=255)                                                  gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                                                                                                     >  2:949311/1‑112 (MQ=255)                                                  gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                                                                                                     <  1:949311/112‑1 (MQ=255)                                                  gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAt                                                                                                <  2:301785/149‑1 (MQ=255)                                                       ttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcgc                                                                                           >  3:895930/1‑149 (MQ=255)                                                           aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaa                                                                                       >  1:673996/1‑149 (MQ=255)                                                             cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                                                                                           >  2:801253/1‑127 (MQ=255)                                                             cacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                                                                                           <  1:801253/127‑1 (MQ=255)                                                                gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                                                                                           <  3:185456/124‑1 (MQ=255)                                                                gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                                                                                                           >  4:185456/1‑124 (MQ=255)                                                                  tGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCg                                                                                >  1:1587565/1‑149 (MQ=255)                                                                    ttGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt                                                                              <  2:673996/149‑1 (MQ=255)                                                                       cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAt                                                                           <  2:1587565/149‑1 (MQ=255)                                                                                     ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                                                                                                                   >  1:586958/1‑95 (MQ=255)                                                                                     ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                                                                                                                   <  2:586958/95‑1 (MQ=255)                                                                                          ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt                                                                              >  2:373932/1‑127 (MQ=255)                                                                                          ccTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGtt                                                                              <  1:373932/127‑1 (MQ=255)                                                                                           cTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTGTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACAtt                                                             <  3:1602740/143‑1 (MQ=255)                                                                                           cTGAAAACAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACAtt                                                             >  4:1602740/1‑143 (MQ=255)                                                                                                aaTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGaa                                                  <  4:895930/149‑1 (MQ=255)                                                                                                    gtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt                                                                      >  4:692080‑M2/45‑125 (MQ=255)                                                                                                    gtaaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCAt                                                                      <  3:692080‑M2/81‑1 (MQ=255)                                                                                                     taaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAatatat                                             <  3:259299‑M2/106‑1 (MQ=255)                                                                                                     taaataaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAatatat                                             >  4:259299‑M2/44‑149 (MQ=255)                                                                                                         taaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt                                                                                                  >  4:270737‑M2/40‑92 (MQ=255)                                                                                                         taaaaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt                                                                                                  <  3:270737‑M2/53‑1 (MQ=255)                                                                                                            aaaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCg                                      >  1:514666‑M2/37‑149 (MQ=255)                                                                                                            AAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAtt                                                                          >  4:251551‑M1/1‑113 (MQ=255)                                                                                                            AAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTAtt                                                                          <  3:251551‑M1/113‑1 (MQ=255)                                                                                                             aaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                                                                                             >  1:1673233‑M2/36‑77 (MQ=255)                                                                                                             aaaacctgctggtgaggcaggttcttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                                                                                                             <  2:1673233‑M2/42‑1 (MQ=255)                                                                                                                       tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata                                                                                   >  3:1863130/1‑93 (MQ=255)                                                                                                                       tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAata                                                                                   <  4:1863130/93‑1 (MQ=255)                                                                                                                       tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAatca                           >  1:1070662/1‑149 (MQ=255)                                                                                                                       tCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAatca                           >  4:117057/1‑149 (MQ=255)                                                                                                                            agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAat                                                 >  3:1692234/1‑122 (MQ=255)                                                                                                                            agcagGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAat                                                 <  4:1692234/122‑1 (MQ=255)                                                                                                                                  tttttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAg                                                         >  4:928888/1‑108 (MQ=255)                                                                                                                                  tttttttATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAg                                                         <  3:928888/108‑1 (MQ=255)                                                                                                                                     ttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATa                                                                 >  4:1834553‑M2/12‑97 (MQ=255)                                                                                                                                     ttttatttactGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATa                                                                 <  3:1834553‑M2/86‑1 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAatat                                                                                  >  3:455884‑M2/2‑70 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAatat                                                                                  <  4:455884‑M2/69‑1 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGaa                                                  <  1:1743069‑M2/101‑1 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGaa                                                  >  2:1743069‑M2/2‑102 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCtgt   >  3:1856486‑M2/2‑149 (MQ=255)                                                                                                                                               tGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCtgt   >  2:1101048‑M2/2‑149 (MQ=255)                                                                                                                                                gtgATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCtgtg  <  2:514666/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                     TAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAAATATCGTTTATTTCATTAATACATTTCAGGGATGAATATATGTCACCGCAGAATAATCATCTGCAGCGTCCGCCTGCTGCTGTG  >  NC_000913/2204349‑2204640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.