BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2516411	191 (1.020)	16 (0.090)	8/230	NT	7.9%	coding (1422/2190 nt)	yfeA	putative diguanylate cyclase
*	?	NC_000913	= 2516437	186 (1.030)	16 (0.090)	8/230	NT	7.9%	coding (1396/2190 nt)	yfeA	putative diguanylate cyclase

Only 100 of 251 total aligned reads displayed.

GGATCTCATCATAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTCCAGTGAATT  >  NC_000913/2516266‑2516558

ggATCTCATCATAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  <  3:1147907/149‑1 (MQ=255)

ggATCTCATCATAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  <  3:34796/149‑1 (MQ=255)

   tctcATCATAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGcc                                                                                                                                               <  4:1327716/149‑1 (MQ=255)

       atcatAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGca                                                                                                                                           <  1:762068/149‑1 (MQ=255)

       atcatAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGca                                                                                                                                           <  4:1014454/149‑1 (MQ=255)

          atAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACat                                                                                                                                        <  2:1210557/149‑1 (MQ=255)

            aaCCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  >  1:1833603/1‑137 (MQ=255)

            aaCCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  <  4:1690484/137‑1 (MQ=255)

            aaCCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  >  3:1690484/1‑137 (MQ=255)

                ttCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatgatgat                                                                                                                                  <  2:1824787/149‑1 (MQ=255)

                ttCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatga                                                                                                                                      <  3:899369/145‑1 (MQ=255)

                 tCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAgc                                                                                                                                                  <  2:273560/132‑1 (MQ=255)

                 tCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatgatgatg                                                                                                                                 <  1:1110331/149‑1 (MQ=255)

                     ccTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACat                                                                                                                                        <  4:203440/138‑1 (MQ=255)

                      ctctTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatga                                                                                                                                      <  4:844420/139‑1 (MQ=255)

                      ctctTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTgcgc                                                                                                                            >  3:1563355/1‑149 (MQ=255)

                       tctTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCa                                                                                                                           >  3:369496/1‑149 (MQ=255)

                       tctTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCa                                                                                                                           >  3:50464/1‑149 (MQ=255)

                           tgttgCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAggat                                                                                                                       >  1:1636363‑M2/1‑145 (MQ=255)

                            gttgCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGAtt                                                                                                                      <  4:1453292/149‑1 (MQ=255)

                             ttgCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTg                                                                                                                     >  4:215920/1‑149 (MQ=255)

                              tgCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGc                                                                                                                    <  2:520965/149‑1 (MQ=255)

                               gCGAATTGGCTGGGCGTAGAGCCGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCCATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCt                                                                                                                   <  4:1563355/149‑1 (MQ=255)

                               gCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCt                                                                                                                   <  4:789494/149‑1 (MQ=255)

                                cGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTc                                                                                                                  <  2:1486488/149‑1 (MQ=255)

                                 gAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTcc                                                                                                                 >  1:1286546/1‑149 (MQ=255)

                                 gAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTcc                                                                                                                 >  1:1692723/1‑149 (MQ=255)

                                 gAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTcc                                                                                                                 >  1:1720841/1‑149 (MQ=255)

                                   aTTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCgc                                                                                                               >  1:1388310/1‑149 (MQ=255)

                                        cTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCgccagcc                                                                                                          >  4:124882/1‑149 (MQ=255)

                                          gggCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGccagccag                                                                                                        >  3:315981/1‑149 (MQ=255)

                                          gggCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGccagccag                                                                                                        >  4:597385/1‑149 (MQ=255)

                                          gggCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGccagccag                                                                                                        >  4:1153318/1‑149 (MQ=255)

                                           ggCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCcagccagc                                                                                                       <  2:333862/149‑1 (MQ=255)

                                            gCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCt                                                                                                      <  1:1626832/149‑1 (MQ=255)

                                            gCGTAGAGCAACAAATCACCCTTATCTAACGCCGTGCGAATGGTATTCAGCAATAGCGCCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCGGCGCCCTCACATGATGTTGTGCACATGATTGCTCCGCCAGCCAGCt                                                                                                      <  4:907378/149‑1 (MQ=255)

                                              gTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCAATCCtgcgcacatcatcatgtgctggcgctggatagcaga                                                                                                                 >  4:569981‑M1/1‑100 (MQ=255)

                                                      gcaAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGCTTGCTCCGCCAGCCAGCTTAACTGcccc                                                                                            <  3:124882/149‑1 (MQ=255)

                                                             aCCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAgg                                                                                     <  4:315981/149‑1 (MQ=255)

                                                               ccTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGcaca                                                                                                                                         <  3:67561/95‑1 (MQ=255)

                                                               ccTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGt                                                                                   >  3:761422/1‑149 (MQ=255)

                                                               ccTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGt                                                                                   >  2:1650366/1‑149 (MQ=255)

                                                               ccTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGt                                                                                   >  4:454786/1‑149 (MQ=255)

                                                                cTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGAATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGtt                                                                                  <  4:38364/149‑1 (MQ=255)

                                                                    tCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAg                                                                              <  1:370530/149‑1 (MQ=255)

                                                                     cTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatga                                                                                                                                      <  1:48346/92‑1 (MQ=255)

                                                                     cTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACatga                                                                                                                                      >  2:48346/1‑92 (MQ=255)

                                                                      tAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTaa                                                                                                   <  4:629573/126‑1 (MQ=255)

                                                                      tAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTaa                                                                                                   >  3:629573/1‑126 (MQ=255)

                                                                      tAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAggg                                                                            >  2:1405824/1‑149 (MQ=255)

                                                                          gCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCtgcgcacatcatcatgtgctggcgctgga                                                                                                                        >  2:1881876‑M1/1‑72 (MQ=255)

                                                                          gCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTc                                                                        <  3:146688/149‑1 (MQ=255)

                                                                           ccGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGACAGCCAGCTTa                                                                                                    <  2:771798/120‑1 (MQ=255)

                                                                            cGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCt                                                                      >  2:108891/1‑149 (MQ=255)

                                                                            cGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTATGCCCGGAAACCATCTCCTCTCAGCTATCCAGCGCCAGCACATGATGATGTGCTCAGGATTGCTCCGCCAGCCAGCTTAACTGCACCCACAAGGGTTGCCGGGTTTCCt                                                                      <  2:1613019/149‑1 (MQ=255)

                                                                              tGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGa                                                                    <  3:420167/149‑1 (MQ=255)

                                                                              tGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGa                                                                    <  2:1286546/149‑1 (MQ=255)

                                                                               gCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGAt                                                                   <  2:1565306/149‑1 (MQ=255)

                                                                                    tGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAggat                                                                                                                       >  2:1098580‑M2/1‑88 (MQ=255)

                                                                                       tATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCa                                                           >  2:254401/1‑149 (MQ=255)

                                                                                         ttCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAgg                                                                                     >  4:368195/1‑121 (MQ=255)

                                                                                         ttCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCaaa                                                         >  4:1379406/1‑149 (MQ=255)

                                                                                           cAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAAc                                                       <  3:215920/149‑1 (MQ=255)

                                                                                            aGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACat                                                                                                                                        <  4:257369/67‑1 (MQ=255)

                                                                                             gCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAgg                                                                             <  4:1645329/125‑1 (MQ=255)

                                                                                                     aCCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAAc                                                                                                  >  3:1485430/1‑96 (MQ=255)

                                                                                                          tttAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCAc                                        <  1:405648/149‑1 (MQ=255)

                                                                                                            tAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAggatcgc                                                                                                                    <  3:1025986‑M2/71‑8 (MQ=255)

                                                                                                            tAGTGGTCTGCACGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCa                                      >  3:1636733/1‑149 (MQ=255)

                                                                                                               tGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAgg                                                                             >  2:1365485/1‑107 (MQ=255)

                                                                                                               tGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAgg                                                                             <  1:1365485/107‑1 (MQ=255)

                                                                                                               tGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAg                                   <  2:1720841/149‑1 (MQ=255)

                                                                                                                 gTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGcc                                 <  1:108891/149‑1 (MQ=255)

                                                                                                                  tCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGc                                  >  4:1493618/1‑147 (MQ=255)

                                                                                                                    tGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCaaa                                                         <  3:1412370/122‑1 (MQ=255)

                                                                                                                    tGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCat                              >  2:645832/1‑149 (MQ=255)

                                                                                                                              ccATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCcaacaa                                                                                       <  3:820913/82‑1 (MQ=255)

                                                                                                                                aTCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGt                  >  2:89140/1‑149 (MQ=255)

                                                                                                                                aTCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGt                  <  3:9853/149‑1 (MQ=255)

                                                                                                                                 tctcCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTa                 >  1:305403/1‑149 (MQ=255)

                                                                                                                                      tctctGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTcc                                                                       <  3:878493/90‑1 (MQ=255)

                                                                                                                                      tctctGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTcc                                                                       >  4:878493/1‑90 (MQ=255)

                                                                                                                                      tctctGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGtt            >  4:710258/1‑149 (MQ=255)

                                                                                                                                      tctctGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTACAGGCTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGtt            >  3:1787019/1‑149 (MQ=255)

                                                                                                                                        tctGCTATCCAGCGCCAGCACATGATGATGTGCGCAggattgcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttgctgctctac                       <  3:569981‑M2/136‑101 (MQ=255)

                                                                                                                                        tctGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTcc          <  2:1692723/149‑1 (MQ=255)

                                                                                                                                          tGCTATCCAGCGCCAGCACATGATGATGTGCGCTggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccatt                                                           <  2:919089‑M2/98‑65 (MQ=255)

                                                                                                                                          tGCTATCCAGCGCCAGCACATGATGATGTGCGCTggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccatt                                                           >  1:919089‑M2/1‑34 (MQ=255)

                                                                                                                                            cTATCCAGCGCCAGCACATGATGATGTGCGCAggattgcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttgctgc                            <  3:220645‑M2/127‑96 (MQ=255)

                                                                                                                                             tATCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttgctgctctacgcccagccaattcgcaac     <  1:644154‑M2/149‑119 (MQ=255)

                                                                                                                                             tATCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttg                                <  1:652599‑M2/122‑92 (MQ=255)

                                                                                                                                             tATCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagggtgatttg                                >  2:652599‑M2/1‑31 (MQ=255)

                                                                                                                                              aTCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTCCAGTGaa    <  1:89140/149‑1 (MQ=255)

                                                                                                                                              aTCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTCCAGTGaa    <  2:377077/149‑1 (MQ=255)

                                                                                                                                               tCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatccgg                                        >  3:1415352‑M2/1‑29 (MQ=255)

                                                                                                                                               tCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagg                                        <  4:1415352‑M2/112‑84 (MQ=255)

                                                                                                                                               tCCAGCGCCAGCACATGATGATGTGCGCAggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggc                                                   <  1:1881876‑M2/101‑73 (MQ=255)

                                                                                                                                                ccAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTCCAGTGAAtt  >  1:1002157/1‑149 (MQ=255)

                                                                                                                                                 ctgcgcacatcatcatgtgctggcgctggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagg                                        <  2:866227‑M1/110‑110 (MQ=255)

                                                                                                                                                 ctgcgcacatcatcatgtgctggcgctggatagcagagaggagatggtttccgggcagaccactaaacaggtgctattgctgaataccattcgcacggcgttagatcagg                                        >  1:866227‑M1/1‑1 (MQ=255)

GGATCTCATCATAACCTTCACCCTCTTTGTTGCGAATTGGCTGGGCGTAGAGCAGCAAATCACCCTGATCTAACGCCGTGCGAATGGTATTCAGCAATAGCACCTGTTTAGTGGTCTGCCCGGAAACCATCTCCTCTCTGCTATCCAGCGCCAGCACATGATGATGTGCGCAGGATTGCTCCGCCAGCCAGCTTAACTGCCCCAACAAGGGTTGCAGGGTTTCCTGATTTCCATCAAAACGCCCCCAGGCAGCACCATAGCCCATATCCAGCCCGGTATTGTTCCAGTGAATT  >  NC_000913/2516266‑2516558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.