New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4196527 =190 (1.020)12 (0.070) 8/232 NT 5.9% coding (282/477 nt) rsd stationary phase protein, binds sigma 70 RNA polymerase subunit
?NC_000913 4196561 = 198 (1.090)coding (248/477 nt) rsd stationary phase protein, binds sigma 70 RNA polymerase subunit

Only 100 of 223 total aligned reads displayed.

GCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACG  >  NC_000913/4196379‑4196675
                                                                                                                                                    |                                                                                                                                                    
acaatctgcttggcattaagcctggcaaagagtcgtacatgaggctaaacgaaaaagcccttgatgatttgtttcagagcctggtccattacgtgtctgccggacctttcagtatttatgagcgcattcttcataagctggaaggcaac                                                                                                                                                      >  3:1585078‑M1/149‑149 (MQ=255)
               caAAGCGCGCTTCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTcgcg                                                                                                                                       >  4:700065/1‑149 (MQ=255)
                     gcgcTTCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGc                                                                                                                                                      <  4:1585973/128‑1 (MQ=255)
                        cTTCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGcgcgcgcg                                                                                                                              >  2:976968/1‑149 (MQ=255)
                         ttCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTc                                                                                                                                          >  3:1239435/1‑136 (MQ=255)
                             aGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTg                                                                                                                         >  2:1295720/1‑149 (MQ=255)
                                tcgtacatgaggctaaacgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGCGGCGCGCGCGAGTTGccc                                                                                                                      <  2:1218568‑M1/33‑1 (MQ=255)
                                tcgtacatgaggctaaacgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGCGGCGCGCGCGAGTTGccc                                                                                                                      <  4:1189512‑M1/33‑1 (MQ=255)
                                 ccTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAAt                                                                                                                                              >  4:1847110/1‑124 (MQ=255)
                                 ccTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAAt                                                                                                                                              <  3:1847110/124‑1 (MQ=255)
                                 ccTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCg                                                                                                                     >  1:459777/1‑149 (MQ=255)
                                        gATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCtt                                                                                                              >  4:125405/1‑149 (MQ=255)
                                           gctaaacgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCgg                                                                                                                                                    <  3:1504798‑M1/3‑1 (MQ=255)
                                            tCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTc                                                                                                                                          >  3:1417043/1‑117 (MQ=255)
                                              aGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAg                                                                                                          <  4:1320692/147‑1 (MQ=255)
                                              aGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCt                                                                                                        >  1:950788/1‑149 (MQ=255)
                                               gATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTc                                                                                                                                          >  3:1336328/1‑114 (MQ=255)
                                               gATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCtt                                                                                                       >  1:1159350/1‑149 (MQ=255)
                                                 cgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGTGGCGCGCGCGAGTTGCCCGt                                                                                                                    >  4:758747‑M1/100‑134 (MQ=255)
                                                  aaaaCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATg                                                                                                    <  1:1295720/149‑1 (MQ=255)
                                                     aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                 >  1:1707709/1‑149 (MQ=255)
                                                     aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                 >  1:341194/1‑149 (MQ=255)
                                                          ttGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgc                                                                                            >  4:1709446/1‑149 (MQ=255)
                                                          ttGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgc                                                                                            >  1:1227359/1‑149 (MQ=255)
                                                            gAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgcgc                                                                                          >  4:325644/1‑149 (MQ=255)
                                                                 tCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATa                                                                                     >  3:656549/1‑149 (MQ=255)
                                                                   aaGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGcc                                                                                                                                                  <  1:884027/86‑1 (MQ=255)
                                                                     ggTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                 >  4:748045/1‑149 (MQ=255)
                                                                     ggTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                 <  3:1146595/149‑1 (MQ=255)
                                                                     ggTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                 >  4:1492869/1‑149 (MQ=255)
                                                                          ttATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGtt                                                                                                                   >  1:649566/1‑110 (MQ=255)
                                                                          ttATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGtt                                                                                                                   <  2:649566/110‑1 (MQ=255)
                                                                             tCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCgcggc                                                                                                                                     >  4:446282/1‑89 (MQ=255)
                                                                             tCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCgcggc                                                                                                                                     <  3:446282/89‑1 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaa                                                                                                  >  3:1122822/1‑121 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                      >  3:170906/1‑149 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                      <  4:1216600/149‑1 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                      <  2:1707709/149‑1 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                      <  2:341194/149‑1 (MQ=255)
                                                                                tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                      >  4:1736512/1‑149 (MQ=255)
                                                                                 gATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCg                                                                     >  3:1769641/1‑149 (MQ=255)
                                                                                 gATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCg                                                                     <  3:758559/149‑1 (MQ=255)
                                                                                      aTGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGa                                                                >  1:1753431/1‑149 (MQ=255)
                                                                                         gCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGa                                                                                                                             <  4:1131931/85‑1 (MQ=255)
                                                                                         gCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                             <  4:1021413/149‑1 (MQ=255)
                                                                                            ttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCa                                                                                                           <  3:1205456‑M1/44‑1 (MQ=255)
                                                                                            gTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTa                                                          >  3:293281/1‑149 (MQ=255)
                                                                                             tttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgcgc                                                                                          >  1:999585/1‑116 (MQ=255)
                                                                                             tttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTaa                                                         <  4:1769641/149‑1 (MQ=255)
                                                                                              ttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAAt                                                        >  3:837919/1‑149 (MQ=255)
                                                                                                ccAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGATGAATGCGCTCATAAATa                                                                                 <  4:1695673/122‑1 (MQ=255)
                                                                                                ccAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                 >  3:1695673/1‑122 (MQ=255)
                                                                                                ccAGACTGGAATCGTAGTAATCCATAATCTGTGGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                 <  4:27631/122‑1 (MQ=255)
                                                                                                   gACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaa                                                                                                  <  2:1388551/102‑1 (MQ=255)
                                                                                                   gACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaa                                                                                                  >  1:1388551/1‑102 (MQ=255)
                                                                                                   gACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGa                                                                             <  2:789714/123‑1 (MQ=255)
                                                                                                   gACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                             <  3:173533/139‑1 (MQ=255)
                                                                                                    aCTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                  >  3:1017676/1‑149 (MQ=255)
                                                                                                         aaTCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctc                                             <  2:459777/149‑1 (MQ=255)
                                                                                                           tCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTg                                           >  2:1725767/1‑149 (MQ=255)
                                                                                                             gtagtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGAc                                         >  1:296527/1‑149 (MQ=255)
                                                                                                              tagtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACa                                        >  1:702150/1‑149 (MQ=255)
                                                                                                               agtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTTCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCAGAAATACTGAAATGTCCGGCAGACaa                                                             <  1:1038609/127‑1 (MQ=255)
                                                                                                               agtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACaa                                       >  3:1634845/1‑149 (MQ=255)
                                                                                                                gtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctct                                            <  4:48130/143‑1 (MQ=255)
                                                                                                                gtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctct                                            >  3:48130/1‑143 (MQ=255)
                                                                                                                 taATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATg                                                                                             <  1:709047/93‑1 (MQ=255)
                                                                                                                   aTCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGGCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACaaaatt                                   <  4:1362219/149‑3 (MQ=255)
                                                                                                                   aTCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                   >  1:573505/1‑149 (MQ=255)
                                                                                                                    tCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAatc                                  >  2:412001/1‑149 (MQ=255)
                                                                                                                     ccATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAatca                                 <  4:1441314/149‑1 (MQ=255)
                                                                                                                      cATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCATATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                             <  4:1081464/120‑1 (MQ=255)
                                                                                                                      cATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaagaa                                                                                               >  4:231597/1‑86 (MQ=255)
                                                                                                                      cATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAatcat                                >  4:1238017/1‑149 (MQ=255)
                                                                                                                      cATAATCTGTTCAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                             >  3:1081464/1‑120 (MQ=255)
                                                                                                                       aTAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                             <  3:1320120/119‑1 (MQ=255)
                                                                                                                       aTAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctc                                             <  2:1542657/135‑1 (MQ=255)
                                                                                                                       aTAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctc                                             >  1:1542657/1‑135 (MQ=255)
                                                                                                                        tAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAAtcatca                              >  1:899034/1‑149 (MQ=255)
                                                                                                                          aTCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAg                            <  3:207215/149‑1 (MQ=255)
                                                                                                                          aTCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAg                            <  4:1634845/149‑1 (MQ=255)
                                                                                                                             tGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATAc                                                                                >  4:152197/1‑94 (MQ=255)
                                                                                                                             tGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATAc                                                                                <  3:152197/94‑1 (MQ=255)
                                                                                                                               ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATc                                                       >  1:1658027/1‑117 (MQ=255)
                                                                                                                               ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATc                                                       <  2:1658027/117‑1 (MQ=255)
                                                                                                                               ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                  >  3:26694/1‑122 (MQ=255)
                                                                                                                               ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCtt                       >  2:703411/1‑149 (MQ=255)
                                                                                                                                tGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCttt                      <  2:950788/149‑1 (MQ=255)
                                                                                                                                 gAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCtttt                     <  2:899034/149‑1 (MQ=255)
                                                                                                                                    tATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGa                                                                <  2:868414/103‑1 (MQ=255)
                                                                                                                                    tATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAg                                                            <  1:807390/107‑1 (MQ=255)
                                                                                                                                      ttGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGtt                <  4:640564/149‑1 (MQ=255)
                                                                                                                                      ttGGCTTCGAGTTGCGGCCAAATCTTCACGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAg                            >  3:1264080/1‑137 (MQ=255)
                                                                                                                                       tGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                   >  3:599578/1‑129 (MQ=255)
                                                                                                                                          cTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGAc                                                               >  3:1490767/1‑98 (MQ=255)
                                                                                                                                           ttCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTa                                                                                                      <  2:712975/58‑1 (MQ=255)
                                                                                                                                              gAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCg                  <  2:108410/139‑1 (MQ=255)
                                                                                                                                               aGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCAt       <  1:412001/149‑1 (MQ=255)
                                                                                                                                                 ttGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGt     >  1:766451/1‑149 (MQ=255)
                                                                                                                                                  tGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATAATGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTa    <  2:194415/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
GCTTATCTTCCAGCACAAAGCGCGCTTCCAGCGCCTCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACG  >  NC_000913/4196379‑4196675

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.