BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4196527 =	190 (1.020)	12 (0.070)	8/232	NT	5.9%	coding (282/477 nt)	rsd	stationary phase protein, binds sigma 70 RNA polymerase subunit
*	?	NC_000913	4196561 =	198 (1.090)	12 (0.070)	8/232	NT	5.9%	coding (248/477 nt)	rsd	stationary phase protein, binds sigma 70 RNA polymerase subunit

Only 100 of 252 total aligned reads displayed.

TCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAGGCTTAATGCCAACCAGATTGTA  >  NC_000913/4196414‑4196709

tCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGtt                                                                                                                                                     <  3:700065/149‑1 (MQ=255)

 acatgaggctaaacgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTg                                                                                                                                                    >  3:158305‑M1/113‑149 (MQ=255)

         tCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAg                                                                                                                                            >  2:1694363/1‑149 (MQ=255)

         tCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAg                                                                                                                                            >  1:1779781/1‑149 (MQ=255)

           aGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAg                                                                                                                                            <  4:1320692/147‑1 (MQ=255)

            gATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGt                                                                                                                                                      >  4:1229382/1‑136 (MQ=255)

              cgaaaaagcccttgatgatttttgtcagagcctggtcgattacttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGTGGCGCGCGCGAGTTGCCCGt                                                                                                                                                      >  4:758747‑M1/100‑134 (MQ=255)

                  aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                                                   >  1:1707709/1‑149 (MQ=255)

                  aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                                                   >  3:1757227/1‑149 (MQ=255)

                  aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                                                   >  1:341194/1‑149 (MQ=255)

                  aCCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaag                                                                                                                                   >  3:1216600/1‑149 (MQ=255)

                         gAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAAt                                                                                                                                >  1:894339/1‑145 (MQ=255)

                                  ggTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                                                   >  4:1492869/1‑149 (MQ=255)

                                  ggTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                                                   <  3:1146595/149‑1 (MQ=255)

                                       ttATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGtt                                                                                                                                                     >  1:649566/1‑110 (MQ=255)

                                           cATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGt                                                                                                          >  3:640564/1‑149 (MQ=255)

                                             tGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTcc                                                                                                        >  4:1736512/1‑149 (MQ=255)

                                              gATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCg                                                                                                       <  3:758559/149‑1 (MQ=255)

                                               aTCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCgg                                                                                                      <  2:1397264/149‑1 (MQ=255)

                                                      gCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                                                               <  4:1021413/149‑1 (MQ=255)

                                                         ttgtctgccggacatttcagtatttatgagcgcattcttcataagctggaaggcaaCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCa                                                                                                                                             <  3:1205456‑M1/44‑1 (MQ=255)

                                                          tttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgcgc                                                                                                                            <  2:999585/116‑1 (MQ=255)

                                                          tttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATgcgc                                                                                                                            >  1:999585/1‑116 (MQ=255)

                                                          tttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTaa                                                                                           <  4:1769641/149‑1 (MQ=255)

                                                           ttCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAAt                                                                                          <  3:1709446/149‑1 (MQ=255)

                                                             ccAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGATGAATGCGCTCATAAATa                                                                                                                   <  4:1695673/122‑1 (MQ=255)

                                                             ccAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                                                   >  3:27631/1‑122 (MQ=255)

                                                              cAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGcc                                                                                                                                                  >  3:1771931/1‑90 (MQ=255)

                                                              cAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGa                                                                                       <  4:170906/149‑1 (MQ=255)

                                                              cAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGa                                                                                       <  3:1708511/149‑1 (MQ=255)

                                                                gACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGa                                                                                                               <  2:789714/123‑1 (MQ=255)

                                                                 aCTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                                                    >  3:1362219/1‑149 (MQ=255)

                                                                 aCTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                                                    >  3:1017676/1‑149 (MQ=255)

                                                                      aaTCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctc                                                                               <  2:459777/149‑1 (MQ=255)

                                                                       aTCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATa                                                                                                                   <  2:350273/112‑1 (MQ=255)

                                                                        tCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTg                                                                             >  1:1264775/1‑149 (MQ=255)

                                                                            agtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTTCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCAGAAATACTGAAATGTCCGGCAGACaa                                                                                               <  1:1038609/127‑1 (MQ=255)

                                                                            agtaATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACaa                                                                         >  3:1634845/1‑149 (MQ=255)

                                                                              taATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATg                                                                                                                               <  1:709047/93‑1 (MQ=255)

                                                                                aTCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                                                     >  1:573505/1‑149 (MQ=255)

                                                                                aTCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                                                     >  2:68069/1‑149 (MQ=255)

                                                                                 tCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAatc                                                                    >  2:412001/1‑149 (MQ=255)

                                                                                 tCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                                                     <  1:1421823/148‑1 (MQ=255)

                                                                                   cATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaagaa                                                                                                                                 <  3:231597/86‑1 (MQ=255)

                                                                                   cATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATgaagaa                                                                                                                                 >  4:231597/1‑86 (MQ=255)

                                                                                    aTAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                                                               <  3:1320120/119‑1 (MQ=255)

                                                                                      aaTCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCaa                                                               <  4:293281/149‑1 (MQ=255)

                                                                                       aTCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAg                                                              >  4:736083/1‑149 (MQ=255)

                                                                                          tGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATAc                                                                                                                  >  4:152197/1‑94 (MQ=255)

                                                                                            ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAAt                                                                                                                                >  2:163698/1‑78 (MQ=255)

                                                                                            ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAAt                                                                                                            >  1:951529/1‑98 (MQ=255)

                                                                                            ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATc                                                                                         >  1:1658027/1‑117 (MQ=255)

                                                                                            ttGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCtt                                                         >  2:703411/1‑149 (MQ=255)

                                                                                             tGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCttt                                                        <  2:950788/149‑1 (MQ=255)

                                                                                             tGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCttt                                                        <  3:1492869/149‑1 (MQ=255)

                                                                                                gTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTc                                                     >  4:1092954/1‑149 (MQ=255)

                                                                                                 tATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGa                                                                                                  <  2:868414/103‑1 (MQ=255)

                                                                                                 tATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAg                                                                                              <  1:807390/107‑1 (MQ=255)

                                                                                                  aTTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGt                                                   <  2:1753431/149‑1 (MQ=255)

                                                                                                   ttGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                                                    <  2:635856/115‑1 (MQ=255)

                                                                                                    tGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAat                                                                     <  4:599578/129‑1 (MQ=255)

                                                                                                       tggaaggcaacgggcaactcgcgcgcgccgcgaagatttggccgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACaa                                                                                               >  4:1205456‑M2/45‑100 (MQ=255)

                                                                                                        ttCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTa                                                                                                                                        <  2:712975/58‑1 (MQ=255)

                                                                                                        ttCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGcc                                             >  4:767322/1‑149 (MQ=255)

                                                                                                           gAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCg                                                    >  1:108410/1‑139 (MQ=255)

                                                                                                           gAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCa                                          >  2:1318727/1‑149 (MQ=255)

                                                                                                            aGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCAt                                         <  1:412001/149‑1 (MQ=255)

                                                                                                            aGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCAt                                         <  3:1092954/149‑1 (MQ=255)

                                                                                                              ttGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGt                                       >  1:766451/1‑149 (MQ=255)

                                                                                                              caacgggcaactcgcgcgcgccgcgaagatttggccgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGt                                       >  1:1218568‑M2/38‑149 (MQ=255)

                                                                                                               tGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTa                                      <  3:45965/149‑1 (MQ=255)

                                                                                                               tGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATAATGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTa                                      <  2:194415/149‑1 (MQ=255)

                                                                                                                acgggcaactcgcgcgcgccacgaagatttggccgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCg                                                    <  3:758747‑M2/99‑1 (MQ=255)

                                                                                                                  gggcaactcgcgcgcgccgcgaagatttggccgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  2:1218568‑M2/116‑1 (MQ=255)

                                                                                                                  gggcaactcgcgcgcgccgcgaagatttggccgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  4:1189512‑M2/116‑1 (MQ=255)

                                                                                                                   GCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  4:1003862‑M1/148‑1 (MQ=255)

                                                                                                                   GCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  1:688134‑M1/148‑1 (MQ=255)

                                                                                                                   GCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  4:519637‑M1/148‑1 (MQ=255)

                                                                                                                   GCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   >  3:519637‑M1/1‑148 (MQ=255)

                                                                                                                     cAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGc                                                                                 >  1:944565/1‑100 (MQ=255)

                                                                                                                      aaaTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCt                               >  1:476136/1‑149 (MQ=255)

                                                                                                                      aaaTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCt                               >  1:199230/1‑149 (MQ=255)

                                                                                                                        aTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGt                                                                                             <  4:1395497/85‑1 (MQ=255)

                                                                                                                        aTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGt                                                                                             <  4:1468327/85‑1 (MQ=255)

                                                                                                                        aTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCa                                                                                    <  2:105462/94‑1 (MQ=255)

                                                                                                                        aTCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCttt                             >  4:391565/1‑149 (MQ=255)

                                                                                                                         tCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTg                            >  3:1270250/1‑149 (MQ=255)

                                                                                                                           ttCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   >  3:1648772/1‑140 (MQ=255)

                                                                                                                           ttCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGa                                   <  4:164423/140‑1 (MQ=255)

                                                                                                                           ttCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGcc                          >  1:1340793/1‑149 (MQ=255)

                                                                                                                            tCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCa                         <  4:1270250/149‑1 (MQ=255)

                                                                                                                              gcggcgCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAgg                       >  3:1489460/1‑149 (MQ=255)

                                                                                                                                   gcgcgcgAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCtt                              <  3:1240951/137‑1 (MQ=255)

                                                                                                                                   gcgcgcgAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTCTTTCGTTTAGCCTCATGTACGATTCtt                              >  4:1240951/1‑137 (MQ=255)

                                                                                                                                         gAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAGGCTTAATGCCaa            >  4:1842645/1‑149 (MQ=255)

                                                                                                                                              gCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAGGCTTAATGCCAACCAGa       >  3:1400817/1‑149 (MQ=255)

                                                                                                                                               cccGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCtt                              >  4:1604747/1‑125 (MQ=255)

                                                                                                                                                 cgTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGctc                                                                               >  2:899568‑M2/3‑74 (MQ=255)

                                                                                                                                                  gTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAAGGTCCGGCAGACACGTAATGGACCAGGCTCTGAAACAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGACTCTTTGCCAGGCTTAATGCCAAGCAGATTGt   >  3:1585078‑M2/2‑149 (MQ=255)

                                                                                                                                                   ttGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAGGCTTAATGCCAACCAGATTgta  <  2:512255/149‑1 (MQ=255)

TCGCCGATGTCAGATAAAACCTGTTGAAACTCAAGGTAATTATCATGATCGATGGCGGTTTCCAGACTGGAATCGTAGTAATCCATAATCTGTTGAGTATTGGCTTCGAGTTGCGGCCAAATCTTCGCGGCGCGCGCGAGTTGCCCGTTGCCTTCCAGCTTATGAAGAATGCGCTCATAAATACTGAAATGTCCGGCAGACAAGTAATCGACCAGGCTCTGACAAAAATCATCAAGGGCTTTTTCGTTTAGCCTCATGTACGATTCTTTGCCAGGCTTAATGCCAACCAGATTGTA  >  NC_000913/4196414‑4196709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.