BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2884559 =	138 (0.740)	14 (0.080)	12/228	NT	9.6%	coding (2661/2667 nt)	ygcB	Cascade complex anti‑viral R‑loop helicase‑annealase Cas3
*	?	NC_000913	2884597 =	131 (0.730)	14 (0.080)	12/228	NT	9.6%	coding (2623/2667 nt)	ygcB	Cascade complex anti‑viral R‑loop helicase‑annealase Cas3

Only 100 of 178 total aligned reads displayed.

AATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAGTGCAAG  >  NC_000913/2884456‑2884744

aaTTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAg                                                                                                                                              <  3:1092092/149‑1 (MQ=255)

  ttAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGt                                                                                                                                            <  3:879027/149‑1 (MQ=255)

          agaTGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACaa                                                                                                                                    <  4:1681213/149‑1 (MQ=255)

               tACATTGTGCAGCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaataa                                                                                                                                       >  3:1082248/1‑141 (MQ=255)

               tACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaataa                                                                                                                                       <  4:1082248/141‑1 (MQ=255)

                    tgtgCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTAcc                                                                                                                          <  3:1589922/149‑1 (MQ=255)

                           cTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGt                                                                                                                                            <  4:1711990/124‑1 (MQ=255)

                           cTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGt                                                                                                                                            >  3:172847/1‑124 (MQ=255)

                             tCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGAc                                                                                                                 >  1:1683020/1‑149 (MQ=255)

                              cccTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACaa                                                                                                                                    <  3:307980/129‑1 (MQ=255)

                                cTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGc                                                                                                                      >  1:1638883/1‑141 (MQ=255)

                                 tACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaa                                                                                                                                          <  2:288597/120‑1 (MQ=255)

                                 tACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaa                                                                                                                                          >  1:288597/1‑120 (MQ=255)

                                 tACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACccat                                                                                                             >  2:1616339/1‑149 (MQ=255)

                                    ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             <  3:871427/130‑1 (MQ=255)

                                    ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             >  4:871427/1‑130 (MQ=255)

                                    ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACccatcca                                                                                                          >  2:1250403/1‑149 (MQ=255)

                                    ttAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACccatcca                                                                                                          >  1:669271/1‑149 (MQ=255)

                                      aaGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaataa                                                                                                                                       >  4:1226879/1‑118 (MQ=255)

                                       aGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGtaataa                                                                                                                                       >  3:1262494/1‑117 (MQ=255)

                                           ggaaacagaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGtata                                                                                                                                               >  1:1251061‑M1/61‑105 (MQ=255)

                                            ggATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGAtt                                                                                                  >  4:1877542/1‑149 (MQ=255)

                                               tAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt                                                                                                <  4:1602779/148‑1 (MQ=255)

                                               tAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt                                                                                                >  3:1602779/1‑148 (MQ=255)

                                                 agaatctggatggatgggtctggcagggtaacagtattgttattacctatacagGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAg                                                                                                                                              >  2:631512‑M1/55‑100 (MQ=255)

                                                  aCCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGttt                                                                                            >  1:62630/1‑149 (MQ=255)

                                                    cGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTcc                                                                                          <  2:669271/149‑1 (MQ=255)

                                                    cGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTcc                                                                                          >  2:1356239/1‑149 (MQ=255)

                                                          tGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt                                                                                                <  2:130234/137‑1 (MQ=255)

                                                              cTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             <  3:445876/104‑1 (MQ=255)

                                                               ttattaTCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATCTGCAGGGATGACTCTGGTCATCCCTTCATCCGCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCAACCAGATTCTGt                                                                                              <  4:1299505/134‑1 (MQ=255)

                                                                 attatCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAg                                                                             <  1:1250403/149‑1 (MQ=255)

                                                                  ttatCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGt                                                                                              <  3:1226799/131‑1 (MQ=255)

                                                                     tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGtata                                                                                                                                               >  3:702130/1‑79 (MQ=255)

                                                                     tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGtata                                                                                                                                               <  4:702130/79‑1 (MQ=255)

                                                                     tCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc                                                                         >  4:885260/1‑149 (MQ=255)

                                                                          aTTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTcc                                                                                     >  3:917413/1‑132 (MQ=255)

                                                                            tGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc                                                                         <  2:919514/142‑1 (MQ=255)

                                                                              aTAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCa                                                                >  4:1752783/1‑149 (MQ=255)

                                                                                aaCAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATc                                                              <  1:1356239/149‑1 (MQ=255)

                                                                                   aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAgg                                                                                                                                             >  3:1022434/1‑67 (MQ=255)

                                                                                   aaTCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAgg                                                                                                                                             <  4:1022434/67‑1 (MQ=255)

                                                                                       aTTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTaa                                                                          <  1:464156/130‑1 (MQ=255)

                                                                                       aTTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTaa                                                                          <  1:800747/130‑1 (MQ=255)

                                                                                       aTTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTaa                                                                          >  2:464156/1‑130 (MQ=255)

                                                                                          cccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCa                                                    <  3:1411569/149‑1 (MQ=255)

                                                                                           ccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTAccc                                                                                                                         >  4:1514167/1‑79 (MQ=255)

                                                                                           ccGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCAt                                                               <  1:337798/137‑1 (MQ=255)

                                                                                            cGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctact                                                          >  4:1809075/1‑141 (MQ=255)

                                                                                            cGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctact                                                          <  3:1809075/141‑1 (MQ=255)

                                                                                            cGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACtt                                                      >  2:1675671/1‑145 (MQ=255)

                                                                                             gAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             <  4:1463242/73‑1 (MQ=255)

                                                                                             gAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             >  3:1463242/1‑73 (MQ=255)

                                                                                             gAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCt                                                                                                                        >  1:1286141/1‑78 (MQ=255)

                                                                                             gAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGttt                                                                                            <  1:1343810/106‑1 (MQ=255)

                                                                                             gAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGttt                                                                                            >  2:1343810/1‑106 (MQ=255)

                                                                                              aaGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACTCTGCCAGACCCATCCATCCAGATTCTGttt                                                                                            >  1:1558635/1‑105 (MQ=255)

                                                                                              aaGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGtta                                                                                            <  2:1558635/105‑2 (MQ=255)

                                                                                               ctatacaggggatgaagggatgaccagagtcatccctgcaaatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt                                                                                                <  1:631512‑M2/54‑1 (MQ=255)

                                                                                               ctatacaggggatgaagggatgaccagagtcatccctgcaaatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCt                                                                                                >  2:631512‑M2/47‑100 (MQ=255)

                                                                                                tatacaggggatgaagggatgaccagagtcatccctgcaaatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTcc                                                                                          <  2:1251061‑M2/60‑1 (MQ=255)

                                                                                                 ttATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             <  3:835305/69‑1 (MQ=255)

                                                                                                 ttATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGtt                                                                                                                             >  4:835305/1‑69 (MQ=255)

                                                                                                    tttGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTAc                                          <  4:415000/149‑1 (MQ=255)

                                                                                                       GGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGc                                                                                                                      >  3:177348‑M1/1‑70 (MQ=255)

                                                                                                       GGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTc                                                                                           >  1:1562690‑M1/1‑97 (MQ=255)

                                                                                                       GGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTc                                                                                           <  2:1562690‑M1/97‑1 (MQ=255)

                                                                                                       GGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGtt                                       <  3:1004869‑M1/149‑1 (MQ=255)

                                                                                                       GGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGtt                                       >  2:288905‑M1/1‑149 (MQ=255)

                                                                                                          ATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTcc                                    <  1:892440‑M1/149‑1 (MQ=255)

                                                                                                           gatgaagggatgaccagagtcatcccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACccatccat                                                                                                         >  4:562630‑M2/35‑79 (MQ=255)

                                                                                                           gatgaagggatgaccagagtcaccccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACccatccat                                                                                                         <  3:562630‑M2/45‑1 (MQ=255)

                                                                                                              gaagggatgaccagagtcatcccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac                                                           <  2:1098237‑M2/91‑1 (MQ=255)

                                                                                                              gaagggatgaccagagtcatcccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGCTTCCCTTCCAGCCAAAGTAACCCATCTTCATctac                                                           >  1:1098237‑M2/32‑122 (MQ=255)

                                                                                                                agggatgaccagagtcatcccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGa                              >  2:1391642‑M2/30‑149 (MQ=255)

                                                                                                                 gggatgaccagagtcatcccttcatcccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTcc                                                                                     <  1:564579‑M2/65‑1 (MQ=255)

                                                                                                                 gggATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctact                                                          <  3:180021/120‑1 (MQ=255)

                                                                                                                 gggATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATctact                                                          >  4:180021/1‑120 (MQ=255)

                                                                                                                     tGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGt                         <  3:1878228/149‑1 (MQ=255)

                                                                                                                     tGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGt                         <  3:1664913/149‑1 (MQ=255)

                                                                                                                      gACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTa                        >  4:711801/1‑149 (MQ=255)

                                                                                                                         tctGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACAt                     >  2:427137/1‑149 (MQ=255)

                                                                                                                          ctGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACAtt                    <  1:1026372/149‑1 (MQ=255)

                                                                                                                             gTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGAc                 <  1:427137/149‑1 (MQ=255)

                                                                                                                               cATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGAcgc               <  2:568685/149‑1 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc                                                                         >  4:1189303/1‑90 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc                                                                         <  3:1189303/90‑1 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCa                                                    >  2:1062002/1‑111 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCa                                                    <  1:1062002/111‑1 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGa                  >  1:1507761/1‑145 (MQ=255)

                                                                                                                                aTCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGACGGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGGAACCCATCTTCGTCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACCTTGAcgcg              >  4:1167046/1‑149 (MQ=255)

                                                                                                                                 tCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGa             >  4:165867/1‑149 (MQ=255)

                                                                                                                                  cccTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGAt            >  1:995226/1‑149 (MQ=255)

                                                                                                                                   ccTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGtt                                       <  4:1423101/121‑1 (MQ=255)

                                                                                                                                    cTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAAc                                                                         >  4:200343/1‑86 (MQ=255)

                                                                                                                                    cTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTa          >  2:1113521/1‑149 (MQ=255)

                                                                                                                                     ttCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGtt                                       <  2:862078/119‑1 (MQ=255)

                                                                                                                                           ccCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAGTGCaa   >  1:1184957‑M2/3‑149 (MQ=255)

                                                                                                                                             cTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAGTGCaa   >  1:1809511/1‑147 (MQ=255)

                                                                                                                                             cTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAGTGCaa   <  2:1809511/147‑1 (MQ=255)

AATTAAAAGAAGATGTACATTGTGCACCTTCCCTACTTAAGTAGGGATAAACCGTTATTGGTCTTATTATCGTCATTGATAACAATCATTCCCGAAGTTATTTGGGATTTGCAGGGATGACTCTGGTCATCCCTTCATCCCCTGTATAGGTAATAACAATACTGTTACCCTGCCAGACCCATCCATCCAGATTCTGTTTCCCTTCCAGCCAAAGTAACCCATCTTCATCTACTACTTCAGAAAAACTACGTTTCCAGGTGAAGGGTACATTGACGCGATTAAGTGCAAG  >  NC_000913/2884456‑2884744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.