BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3920303 =	127 (0.680)	10 (0.060)	9/228	NT	7.6%	coding (101/534 nt)	atpH	F1 sector of membrane‑bound ATP synthase, delta subunit
*	?	NC_000913	3920328 =	122 (0.680)	10 (0.060)	9/228	NT	7.6%	coding (76/534 nt)	atpH	F1 sector of membrane‑bound ATP synthase, delta subunit

Only 100 of 155 total aligned reads displayed.

TTCTGACCGTTTTCGTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTAGCAGCTTCATCCAC  >  NC_000913/3920180‑3920471

gacatcgtggataaacttgtcgctgaactgtaaggagggaggggctgatgtctgaatttattacggtagctcgcccctacgccaaagcagcttttgactttgccgtcgaacaccaaagtgtagAACGCCAGCATGTCCTGCCAGCGTTc                                                                                                                                                 >  2:1448086‑M1/124‑149 (MQ=255)

      ccGTTTTCGTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTCCACt                                                                                                                                           >  2:1186646/1‑149 (MQ=255)

       cGTTTTCGTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          <  1:1186646/149‑1 (MQ=255)

           ttCGTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGgt                                                                                                                                      <  1:1840408/149‑1 (MQ=255)

              gTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGgt                                                                                                                                      <  4:5762/146‑1 (MQ=255)

              gTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGgt                                                                                                                                      <  4:1602915/146‑1 (MQ=255)

              gTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGgt                                                                                                                                      >  3:5762/1‑146 (MQ=255)

               tCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTc                                                                                                                                  <  4:643262/149‑1 (MQ=255)

                       tgaactgtaaggagggaggggctgatgtctgaatttattacggtagctcgcccctacgccaaagcagcttttgactttgccgtcgaacaccaaagtgtagAACGCCAGCATGTCCTGCCAGCGTTCTa                                                                                                                                               <  1:1784036‑M1/28‑1 (MQ=255)

                       tgaactgtaaggagggaggggctgatgtctgaatttattacggtagctcgcccctacgccaaagcagcttttgactttgccgtcgaacaccaaagtgtagAACGCCAGCATGTCCTGCCAGCGTTCTa                                                                                                                                               >  2:1784036‑M1/101‑128 (MQ=255)

                        tCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGGGTTCTACAATTTGGTGTTCGACGGCaaa                                                                                                                         <  3:1570019/149‑1 (MQ=255)

                        tCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTa                                                                                                                                               >  1:834911/1‑127 (MQ=255)

                        tCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCaaa                                                                                                                         <  1:317803/149‑1 (MQ=255)

                        tCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCaaa                                                                                                                         <  1:340845/149‑1 (MQ=255)

                             acaAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTacac                                                                                                                                            >  4:604230/1‑125 (MQ=255)

                             acaAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          >  3:438143/1‑127 (MQ=255)

                             acaAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          <  4:438143/127‑1 (MQ=255)

                                      gATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAgctgc                                                                                                             <  3:674825/147‑1 (MQ=255)

                                          ggctgatgtctgaatttattacggtagctcgcccctacgccaaagcagcttttgactttgccgtcgaacaccaaagtgtagAACGCCAGCATGTCCTGCCAGCGTTCTac                                                                                                                                              <  2:403296‑M1/29‑1 (MQ=255)

                                          aaCGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCt                                                                                                                                                <  4:1419153/108‑1 (MQ=255)

                                          aaCGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTc                                                                                                                                  >  2:1236859/1‑122 (MQ=255)

                                           aCGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTg                                                                                                                                        <  4:1279581/115‑1 (MQ=255)

                                           aCGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTg                                                                                                                                        >  3:1279581/1‑115 (MQ=255)

                                               cTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCaaaa                                                                                                                  <  3:910802/133‑1 (MQ=255)

                                               cTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAgg                                                                                                  <  3:1369107/149‑1 (MQ=255)

                                                tCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          <  2:57649/108‑1 (MQ=255)

                                                tCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          >  1:57649/1‑108 (MQ=255)

                                                          tttCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTAcc                                                                                       >  3:264982/1‑149 (MQ=255)

                                                               ggCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGtaat                                                                                  >  4:409329/1‑149 (MQ=255)

                                                                gcgcAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGtaata                                                                                 >  3:197220/1‑149 (MQ=255)

                                                                  gcAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATaaa                                                                               <  4:264982/149‑1 (MQ=255)

                                                                  gcAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATaaa                                                                               >  2:764488/1‑149 (MQ=255)

                                                                  gcAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATaaa                                                                               >  1:1304210/1‑149 (MQ=255)

                                                                    aaGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAAtt                                                                             >  2:727357/1‑149 (MQ=255)

                                                                      gcgcgcCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCa                                                                           >  1:1506900/1‑149 (MQ=255)

                                                                        gcgcCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTa                                                                                         <  4:178850/133‑1 (MQ=255)

                                                                          gcCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACa                                                                       >  1:1192488/1‑149 (MQ=255)

                                                                           ccAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACAt                                                                      >  1:94045/1‑149 (MQ=255)

                                                                            cAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACtt                                                                                                                                          >  1:959640/1‑80 (MQ=255)

                                                                              gagagaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAg                                                                   >  3:23104/1‑149 (MQ=255)

                                                                              gagagaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAg                                                                   >  1:658158/1‑149 (MQ=255)

                                                                               agagaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGc                                                                  >  2:891548/1‑149 (MQ=255)

                                                                                 agaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGa                                                                                                                                <  1:192501/85‑1 (MQ=255)

                                                                                 agaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGa                                                                                                                                >  2:192501/1‑85 (MQ=255)

                                                                                 agaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAg                                                                                                   <  1:1077143/114‑1 (MQ=255)

                                                                                 agaAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAg                                                                                                   >  2:1077143/1‑114 (MQ=255)

                                                                                     gCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCccctcc                                                            >  1:700684/1‑149 (MQ=255)

                                                                                         tGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATc                                                                     >  2:960088/1‑136 (MQ=255)

                                                                                         tGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCctccctcc                                                        <  2:700684/149‑1 (MQ=255)

                                                                                           ccATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAgg                                                                                                  <  2:1004585/105‑1 (MQ=255)

                                                                                           ccATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAgg                                                                                                  >  1:1004585/1‑105 (MQ=255)

                                                                                            cATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTa                                                     <  1:1677482/149‑1 (MQ=255)

                                                                                              tttGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGc                                                                                               >  1:720826/1‑105 (MQ=255)

                                                                                                 gTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGtt                                                >  4:1506056/1‑149 (MQ=255)

                                                                                                  ttCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTc                                               >  4:766932/1‑149 (MQ=255)

                                                                                                  ttCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTCCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTc                                               >  3:1368583/1‑149 (MQ=255)

                                                                                                   tCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCa                                              <  1:555939/149‑1 (MQ=255)

                                                                                                   tCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCa                                              <  3:1144009/149‑1 (MQ=255)

                                                                                                    cGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTa                                                     <  4:1306224/141‑1 (MQ=255)

                                                                                                    cGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTa                                                     >  3:1306224/1‑141 (MQ=255)

                                                                                                    cGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAg                                             <  1:764488/149‑1 (MQ=255)

                                                                                                      tttttGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACGCTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTc                                                                            <  4:1099808/116‑1 (MQ=255)

                                                                                                      tttttGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAgg                                                                                                  >  1:920591/1‑94 (MQ=255)

                                                                                                      tttttGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAgg                                                                                                  <  2:920591/94‑1 (MQ=255)

                                                                                                          tGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACaa                                       <  4:23104/149‑1 (MQ=255)

                                                                                                          tGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACaa                                       <  3:1506056/149‑1 (MQ=255)

                                                                                                            gTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGt                                     <  2:1884782/149‑1 (MQ=255)

                                                                                                             ttACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGtt                                    >  4:266017/1‑149 (MQ=255)

                                                                                                                 cTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACaa                                       <  4:1887020/142‑1 (MQ=255)

                                                                                                                 cTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACaa                                       >  3:1887020/1‑142 (MQ=255)

                                                                                                                  tCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATcc                               >  2:1483253/1‑149 (MQ=255)

                                                                                                                  tCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATcc                               >  2:1637324/1‑149 (MQ=255)

                                                                                                                   cggcggCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTAcc                                                                                       >  2:687719/1‑92 (MQ=255)

                                                                                                                   cggcggCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTAcc                                                                                       <  1:687719/92‑1 (MQ=255)

                                                                                                                      cggcAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGa                           <  2:94045/149‑1 (MQ=255)

                                                                                                                       gtagaacgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGcc                                                                 >  1:403296‑M2/30‑110 (MQ=255)

                                                                                                                        tagaacgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCa                                              >  2:1784036‑M2/29‑128 (MQ=255)

                                                                                                                        tagaacgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCa                                              <  1:1784036‑M2/100‑1 (MQ=255)

                                                                                                                        gcAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATg                         >  2:647664/1‑149 (MQ=255)

                                                                                                                         cAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGt                        <  2:527824/149‑1 (MQ=255)

                                                                                                                          gaacgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTc                       >  2:1448086‑M2/27‑149 (MQ=255)

                                                                                                                          aaaCGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTc                       >  1:239484/1‑149 (MQ=255)

                                                                                                                           aacgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCg                      >  2:1540637‑M2/26‑149 (MQ=255)

                                                                                                                           AACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCg                      <  2:1702040‑M1/149‑1 (MQ=255)

                                                                                                                            acgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGc                     <  1:1448086‑M2/125‑1 (MQ=255)

                                                                                                                            acgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGc                     <  1:1540637‑M2/125‑1 (MQ=255)

                                                                                                                             cgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTg                                                                                                         <  3:1725520‑M2/41‑1 (MQ=255)

                                                                                                                             cgctggcaggacatgctggcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTg                                                                                                         >  4:1725520‑M2/24‑64 (MQ=255)

                                                                                                                              GCCAGCATGTCCTGCCAGCGTTCTACACTAGGGTGTTCGACGGCAAGGTCAAAAGTTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGTCATCACCCTCTCCCTCCTTACAGTTCTGCGACAAGTTTATCCACGATGTCGCTg                   <  4:503149‑M1/149‑1 (MQ=255)

                                                                                                                               CCAGCATGTCCTGCCAGCGTTCTACCCTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGtt                                    >  2:174101‑M1/1‑131 (MQ=255)

                                                                                                                               CCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGtt                                    <  1:174101‑M1/131‑1 (MQ=255)

                                                                                                                               CCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGt                  >  1:1637324‑M1/1‑149 (MQ=255)

                                                                                                                                cAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGtt                 >  3:1156618/1‑149 (MQ=255)

                                                                                                                                  gCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTag               >  3:1078797/1‑149 (MQ=255)

                                                                                                                                  gCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTag               >  1:520770/1‑149 (MQ=255)

                                                                                                                                      gTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCctccctcc                                                        >  2:382133/1‑104 (MQ=255)

                                                                                                                                      gTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCctccctcc                                                        <  1:382133/104‑1 (MQ=255)

                                                                                                                                          tGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTAGCAGCTTCa       >  1:1875387/1‑149 (MQ=255)

                                                                                                                                            ccAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTAGCAGCTTCATc     >  3:234093/1‑149 (MQ=255)

                                                                                                                                               gcgttCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTAGCAGCTTCATCCAc  <  3:342682‑M2/144‑1 (MQ=255)

TTCTGACCGTTTTCGTCCAGTTGCTCACCACAAACTGCGATAAACGACTCGGCGAGCGTTTCTGGCGCAAGCGCGCCAGAGAGAAGCTCTGCCATTTGTTCGTTTTTGGTTACCTCGGCGGCAAACGCCAGCATGTCCTGCCAGCGTTCTACACTTTGGTGTTCGACGGCAAAGTCAAAAGCTGCTTTGGCGTAGGGGCGAGCTACCGTAATAAATTCAGACATCAGCCCCTCCCTCCTTACAGTTCAGCGACAAGTTTATCCACGATGTCGCTGTTAGCAGCTTCATCCAC  >  NC_000913/3920180‑3920471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.