New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4166372	46 (0.460)	3 (0.030)	3/314	NT	7.0%	intergenic (+87/‑287)	murI/rrsB	glutamate racemase/16S ribosomal RNA of rrnB operon
	?	NC_000913	= 4166399	35 (0.360)					intergenic (+114/‑260)	murI/rrsB	glutamate racemase/16S ribosomal RNA of rrnB operon

GTGGATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGA  >  NC_000913/4166100‑4166559                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                            gtggATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATTGCAATGACGCCAGGCGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCCCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCAACCACTCacac                                                                                                                                                                                           >  2:495717/1‑275 (MQ=255)                           cgggaCGGCCGGGGTTCTAGAGCATGAAGCCCCGGAAGAAAAACATGCGTAGGCGGAGATTGCCTTTTGAATGGCAATGACGCCAGGGGCTGAACAATTATGGTCCGTGTTACAGCGGTACGGCTTCGAAACGCTCGAAAAACTGTCAGTTTTAGGATGATTTGGTTGAATGTTGCGCGTTCAGAAAATTATTTTAAAATGCCTCGTGTCAGGGCGGAATAAGACCCTGTAATGCGCCACCGCTGACACGGAACAACGGCAAACACGCCGCCgg                                                                                                                                                                  <  4:172090/270‑1 (MQ=21)                           ccGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCgg                                                                                                                                                                  <  2:336011/274‑1 (MQ=255)                                  gCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCg                                                                                                                                                           <  2:462204/274‑1 (MQ=255)                                     tGGTTTGTAGAACGTGTAGCCACGGAGTGAAAATCTGCGGATGCGAAGAATGGTTTTGGTATGGGAATGGGGCGAGGAGCTGAACAATTATTGCCAGTGTTAAGGCGTTACGGCTTCGAAAGGCTCGAAAAACTGGCAGTGTTAGGCTGATTTGGTTGAATGTTGCGCGGTCGGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCgggg                                                                                                                                                        <  4:495712/274‑1 (MQ=21)                                                            ggATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGGTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTTTAATGCGCCACCACTGACCCGGAACAACGGCAAACCCGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAgaga                                                                                                                                >  2:485734/1‑275 (MQ=255)                                                                                  aaTATTGCCTTTTGTATGGGAAAGACGCCAGGATCTGAACAATTATGGCCTAGTTTAAAGCGTAAGAGCTTTGAAACGCTCGGAAAATTGGCATTGTTAGGCTGATTTGAGTAAATGTTGCTCTGTGAGAAAATTATTTTAATGTTCCGCTAGTCAGGCCGGAATATCTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGAct                                                                                                          <  4:312825/275‑1 (MQ=17)                                                                                     tttGCCTTTTGAATGGTAAGGACGCCATGNNNTGAACAATTATTGCCGTTTTTAAAGCTTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTTAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTg                                                                                                       <  3:155180/274‑1 (MQ=18)                                                                                             ttGTAGGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGAGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCggg                                                                                                <  2:513898/274‑1 (MQ=255)                                                                                              tGTATGGAAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACAGCGTCGAAACGATCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCggg                                                                                                <  2:149942/273‑1 (MQ=255)                                                                                                     cAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCGTGACTCTGTAGCGGCAAGGCGtat                                                                                       >  2:220972/1‑275 (MQ=255)                                                                                                              cAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGACAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTCTTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCAACCACTTACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTTGAAACTTCGGCAGAAAAAGCCAAAAAAAATGCCTGACCCTTTATCGGGTAGGCGGTTTATTcacaa                                                                              >  4:374999/1‑274 (MQ=21)                                                                                                                    cTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCcgcg                                                                        <  2:126631/275‑1 (MQ=255)                                                                                                                            ttattGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCgg                                                                                                 >  2:364578/1‑242 (MQ=255)                                                                                                                                tGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAg                                                                                             <  4:364573/242‑1 (MQ=255)                                                                                                                                 gCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACgg                                                                                                                                                                                         <  6:107846/149‑1 (MQ=255)                                                                                                                                   ccGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGaa                                                                                                                                                                                       <  5:369555/149‑1 (MQ=255)                                                                                                                                    cGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAaagcg                                                        <  2:157089/275‑1 (MQ=255)                                                                                                                                       tttACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGaacaac                                                                                                                                                                                   <  5:147977/149‑1 (MQ=255)                                                                                                                                       tttAAAGCGTTACGGGTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGATGATTTGGTTGAAGGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTAGAATGCGCCACCACGGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAaagcgaag                                                     <  2:178562/275‑1 (MQ=255)                                                                                                                                            aGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCaa                                                                                                                                                                              >  7:411374/1‑149 (MQ=255)                                                                                                                                             gCGTTACGGCTTCGAAACGCGCGCAAAACTGGCAGTTTTAGGCTGATTTGGTTGAAGGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACGCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCAc                                               <  2:239912/275‑1 (MQ=255)                                                                                                                                                ttACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAacac                                                                                                                                                                          <  7:407528/149‑1 (MQ=255)                                                                                                                                                ttACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGc                                                                                                                                     >  4:90762/1‑186 (MQ=255)                                                                                                                                                ttACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGc                                            >  2:456723/1‑275 (MQ=255)                                                                                                                                                  aCGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACAcgc                                                                                                                                                                        <  7:457216/149‑1 (MQ=255)                                                                                                                                                    ggCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCagag                                                                                                                                 <  2:90763/186‑1 (MQ=255)                                                                                                                                                          gAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgt                                                                                                                                                                <  7:252579‑M2/149‑3 (MQ=255)                                                                                                                                                          gAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgt                                                                                                                                                                <  6:129778‑M2/149‑3 (MQ=255)                                                                                                                                                            aaCGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgtca                                                                                                                                                              <  8:232176‑M2/149‑5 (MQ=255)                                                                                                                                                               gCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACccggcggcgtgtttgccgttgttccgtgtcagtg                                                                                                                                                           <  7:422613‑M1/149‑35 (MQ=255)                                                                                                                                                               gCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCg                                                                                                                                                           >  7:443427/1‑149 (MQ=255)                                                                                                                                                                cTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATACGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCgg                                                                                                                                                          >  7:392602/1‑149 (MQ=255)                                                                                                                                                                  ttgaaaaCTAGCAATTTTATGCGGAGTTGGTGTAATGTTGCGCAGTCCGAAAAGTATTGTAAATTTCCTCGTGTCAGGCAGGAATAACTCCCGATAATGCGCCACCACGGACACGGAACAACGGCAAACACGCCGCCGGGACAGAGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGATTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGTGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTGATCa                           <  4:220968/271‑1 (MQ=11)                                                                                                                                                                    aaaaaCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGtt                                                                                                                                                      >  6:243430/1‑149 (MQ=255)                                                                                                                                                                    aaaaaCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGtt                                                                                                                                                      >  5:227390/1‑149 (MQ=255)                                                                                                                                                                      aaactttcatgtttAGGTTGATTTGGTTGAAGTTTGGGCGGTCAGAAAATTATTTTAAATTGCCCCTTGGCAGGCCGGAATAACTCCCTATAAGGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCGCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACaa                      <  4:456718/264‑1 (MQ=11)                                                                                                                                                                        aatgcatgTTTTAGGCTGAGTGTGTTGAATGTTGCGCCGTCAAGATATTATTTTAAATTGCCGCTTGTCAGGCCGGAATAACTCCCTATAAATCGCCACCACTGACACGGAACAACGGCAAAAACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATc                    <  4:498830/268‑1 (MQ=11)                                                                                                                                                                        aCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTcc                                                                                                                                                  <  8:411374/149‑1 (MQ=255)                                                                                                                                                                         cTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 <  7:341124/149‑1 (MQ=255)                                                                                                                                                                           ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTga                                                                                                                                               <  7:232176/149‑1 (MQ=255)                                                                                                                                                                           ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGc                                                 >  2:410687/1‑243 (MQ=255)                                                                                                                                                                           ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCtgt                 >  2:244952/1‑275 (MQ=255)                                                                                                                                                                            gCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 >  8:259580/1‑146 (MQ=255)                                                                                                                                                                            gCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 <  7:259580/146‑1 (MQ=255)                                                                                                                                                                               gTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTg                                             <  4:410682/243‑1 (MQ=255)                                                                                                                                                                               gTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg             <  2:410535/275‑1 (MQ=40)                                                                                                                                                                               gTTTTAGGCTAATTTGGTTTGATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg             <  2:1492/275‑1 (MQ=25)                                                                                                                                                                                          aTTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCCCTTTAACAATTTATCAGACAATCTGTGTGGCCACTcgacga  >  2:336330/1‑275 (MQ=25)                                                                                                                                                                                                  gAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCaaaa                                                                                                                        >  8:108428/1‑149 (MQ=34)                                                                                                                                                                                                      gTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAaaataa                                                                                                                    >  5:246938/1‑149 (MQ=31)                                                                                                                                                                                                       ttGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAaaataaa                                                                                                                   <  8:443427/149‑1 (MQ=11)                                                                                                                                                                                                                       ttattTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACccggcggcgtgtttgccgttgttccgtgtca                                                                                                                                                              >  7:179694‑M1/1‑59 (MQ=255)                                                                                                                                                                                                                       ttattTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACccggcggcgtgtttgccgttgttccgtgtca                                                                                                                                                              <  8:179694‑M1/90‑32 (MQ=255)                                                                                                                                                                                                                                                                           cacTGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataattttctgaccgcgcaacattcaaccaaatcagcctaaaactgccagtttttcgagc                                               <  7:422613‑M2/149‑116 (MQ=255)                                                                                                                                                                                                                                                                              tGACccggcggcgtgtttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataattttctgaccgcgcaacattcaaccaaatcagcctaaaactgccagtttttcgagcgtt                                            <  8:232176‑M1/149‑146 (MQ=255)                                                                                                                                                                                                                                                                              tGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataa                                                                                                       >  7:179694‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                                                                              tGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataa                                                                                                       <  8:179694‑M2/90‑60 (MQ=255)                                                                                                                                                                                                                                                                                aCccggcggcgtgtttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataattttctgaccgcgcaacattcaaccaaatcagcctaaaactgccagtttttcgagcgtttc                                          <  7:252579‑M1/149‑148 (MQ=255)                                                                                                                                                                                                                                                                                aCccggcggcgtgtttgccgttgttccgtgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataattttctgaccgcgcaacattcaaccaaatcagcctaaaactgccagtttttcgagcgtttc                                          <  6:129778‑M1/149‑148 (MQ=255)                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                            GTGGATTCTGGCGCAGCGATTGCTCGCCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGA  >  NC_000913/4166100‑4166559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.