New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4166372	46 (0.460)	3 (0.030)	3/314	NT	7.0%	intergenic (+87/‑287)	murI/rrsB	glutamate racemase/16S ribosomal RNA of rrnB operon
	?	NC_000913	= 4166399	35 (0.360)					intergenic (+114/‑260)	murI/rrsB	glutamate racemase/16S ribosomal RNA of rrnB operon

CCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGA  >  NC_000913/4166126‑4166559                                                                                                                                                                                                                                                                                  |                                                                                                                                                                 cgggaCGGCCGGGGTTCTAGAGCATGAAGCCCCGGAAGAAAAACATGCGTAGGCGGAGATTGCCTTTTGAATGGCAATGACGCCAGGGGCTGAACAATTATGGTCCGTGTTACAGCGGTACGGCTTCGAAACGCTCGAAAAACTGTCAGTTTTAGGATGATTTGGTTGAATGTTGCGCGTTCAGAAAATTATTTTAAAATGCCTCGTGTCAGGGCGGAATAAGACCCTGTAATGCGCCACCGCTGACACGGAACAACGGCAAACACGCCGCCgg                                                                                                                                                                  <  4:172090/270‑1 (MQ=21) ccGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCgg                                                                                                                                                                  <  2:336011/274‑1 (MQ=255)        gCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCg                                                                                                                                                           <  2:462204/274‑1 (MQ=255)           tGGTTTGTAGAACGTGTAGCCACGGAGTGAAAATCTGCGGATGCGAAGAATGGTTTTGGTATGGGAATGGGGCGAGGAGCTGAACAATTATTGCCAGTGTTAAGGCGTTACGGCTTCGAAAGGCTCGAAAAACTGGCAGTGTTAGGCTGATTTGGTTGAATGTTGCGCGGTCGGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCgggg                                                                                                                                                        <  4:495712/274‑1 (MQ=21)                                  ggATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGGTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTTTAATGCGCCACCACTGACCCGGAACAACGGCAAACCCGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAgaga                                                                                                                                >  2:485734/1‑275 (MQ=255)                                                        aaTATTGCCTTTTGTATGGGAAAGACGCCAGGATCTGAACAATTATGGCCTAGTTTAAAGCGTAAGAGCTTTGAAACGCTCGGAAAATTGGCATTGTTAGGCTGATTTGAGTAAATGTTGCTCTGTGAGAAAATTATTTTAATGTTCCGCTAGTCAGGCCGGAATATCTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGAct                                                                                                          <  4:312825/275‑1 (MQ=17)                                                           tttGCCTTTTGAATGGTAAGGACGCCATGNNNTGAACAATTATTGCCGTTTTTAAAGCTTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTTAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTg                                                                                                       <  3:155180/274‑1 (MQ=18)                                                                   ttGTAGGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGAGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCggg                                                                                                <  2:513898/274‑1 (MQ=255)                                                                    tGTATGGAAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACAGCGTCGAAACGATCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCggg                                                                                                <  2:149942/273‑1 (MQ=255)                                                                           cAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCGTGACTCTGTAGCGGCAAGGCGtat                                                                                       >  2:220972/1‑275 (MQ=255)                                                                                    cAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGACAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTCTTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCAACCACTTACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTTGAAACTTCGGCAGAAAAAGCCAAAAAAAATGCCTGACCCTTTATCGGGTAGGCGGTTTATTcacaa                                                                              >  4:374999/1‑274 (MQ=21)                                                                                          cTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCcgcg                                                                        <  2:126631/275‑1 (MQ=255)                                                                                                  ttattGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCgg                                                                                                 >  2:364578/1‑242 (MQ=255)                                                                                                      tGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAg                                                                                             <  4:364573/242‑1 (MQ=255)                                                                                                          cGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAaagcg                                                        <  2:157089/275‑1 (MQ=255)                                                                                                             tttAAAGCGTTACGGGTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGATGATTTGGTTGAAGGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTAGAATGCGCCACCACGGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAaagcgaag                                                     <  2:178562/275‑1 (MQ=255)                                                                                                                   gCGTTACGGCTTCGAAACGCGCGCAAAACTGGCAGTTTTAGGCTGATTTGGTTGAAGGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACGCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCAc                                               <  2:239912/275‑1 (MQ=255)                                                                                                                      ttACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGc                                                                                                                                     >  4:90762/1‑186 (MQ=255)                                                                                                                      ttACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGc                                            >  2:456723/1‑275 (MQ=255)                                                                                                                          ggCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCagag                                                                                                                                 <  2:90763/186‑1 (MQ=255)                                                                                                                                gAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgt                                                                                                                                                                <  6:129778‑M2/149‑3 (MQ=255)                                                                                                                                gAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgt                                                                                                                                                                <  7:252579‑M2/149‑3 (MQ=255)                                                                                                                                  aaCGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGgtca                                                                                                                                                              <  8:232176‑M2/149‑5 (MQ=255)                                                                                                                                     gCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCg                                                                                                                                                           >  7:443427/1‑149 (MQ=255)                                                                                                                                      cTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATACGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCgg                                                                                                                                                          >  7:392602/1‑149 (MQ=255)                                                                                                                                        ttgaaaaCTAGCAATTTTATGCGGAGTTGGTGTAATGTTGCGCAGTCCGAAAAGTATTGTAAATTTCCTCGTGTCAGGCAGGAATAACTCCCGATAATGCGCCACCACGGACACGGAACAACGGCAAACACGCCGCCGGGACAGAGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGATTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGTGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTGATCa                           <  4:220968/271‑1 (MQ=11)                                                                                                                                          aaaaaCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGtt                                                                                                                                                      >  5:227390/1‑149 (MQ=255)                                                                                                                                          aaaaaCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGtt                                                                                                                                                      >  6:243430/1‑149 (MQ=255)                                                                                                                                            aaactttcatgtttAGGTTGATTTGGTTGAAGTTTGGGCGGTCAGAAAATTATTTTAAATTGCCCCTTGGCAGGCCGGAATAACTCCCTATAAGGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCGCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACaa                      <  4:456718/264‑1 (MQ=11)                                                                                                                                              aatgcatgTTTTAGGCTGAGTGTGTTGAATGTTGCGCCGTCAAGATATTATTTTAAATTGCCGCTTGTCAGGCCGGAATAACTCCCTATAAATCGCCACCACTGACACGGAACAACGGCAAAAACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATc                    <  4:498830/268‑1 (MQ=11)                                                                                                                                              aCTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTcc                                                                                                                                                  <  8:411374/149‑1 (MQ=255)                                                                                                                                               cTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 <  7:341124/149‑1 (MQ=255)                                                                                                                                                 ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTga                                                                                                                                               <  7:232176/149‑1 (MQ=255)                                                                                                                                                 ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGc                                                 >  2:410687/1‑243 (MQ=255)                                                                                                                                                 ggCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCtgt                 >  2:244952/1‑275 (MQ=255)                                                                                                                                                  gCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 >  8:259580/1‑146 (MQ=255)                                                                                                                                                  gCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCt                                                                                                                                                 <  7:259580/146‑1 (MQ=255)                                                                                                                                                     gTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTg                                             <  4:410682/243‑1 (MQ=255)                                                                                                                                                     gTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg             <  2:410535/275‑1 (MQ=40)                                                                                                                                                     gTTTTAGGCTAATTTGGTTTGATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTgg             <  2:1492/275‑1 (MQ=25)                                                                                                                                                                aTTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCCCTTTAACAATTTATCAGACAATCTGTGTGGCCACTcgacga  >  2:336330/1‑275 (MQ=25)                                                                                                                                                                        gAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCaaaa                                                                                                                        >  8:108428/1‑149 (MQ=34)                                                                                                                                                                            gTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAaaataa                                                                                                                    >  5:246938/1‑149 (MQ=31)                                                                                                                                                                             ttGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAaaataaa                                                                                                                   <  8:443427/149‑1 (MQ=11)                                                                                                                                                                                                                                                 cacTGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataattttctgaccgcgcaacattcaaccaaatcagcctaaaactgccagtttttcgagc                                               <  7:422613‑M2/149‑116 (MQ=255)                                                                                                                                                                                                                                                    tGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataa                                                                                                       <  8:179694‑M2/90‑60 (MQ=255)                                                                                                                                                                                                                                                    tGACACGGAACAACGGCAAACACGCCGCCGGgtcagtggtggcgcattatagggagttattccggcctgacaagaggaaatttaaaataa                                                                                                       >  7:179694‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                                                                                  |                                                                                                                                                                 CCGAACGGCCTGGTTGTTAGAACATGAAGCCCCGGATGCAAAATCTGCCGATGCGAATATTGCCTTTTGTATGGCAATGACGCCAGGAGCTGAACAATTATTGCCCGTTTTACAGCGTTACGGCTTCGAAACGCTCGAAAAACTGGCAGTTTTAGGCTGATTTGGTTGAATGTTGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACAACGGCAAACACGCCGCCGGGTCAGCGGGGTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGA  >  NC_000913/4166126‑4166559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.