Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,992,705 IS5 (+) +4 bp 100% coding (1553‑1556/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)100 (1.010) 81/322 NT 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3992705 = 0 (0.000)coding (1553/2547 nt) cyaA adenylate cyclase
* ? NC_000913 = 2290113NA (NA)137 (1.390) 96/322 NT 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3992708 0 (0.000)coding (1556/2547 nt) cyaA adenylate cyclase

Only 100 of 283 total aligned reads displayed.

AGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCAC  >  NC_000913/3992433‑3992979
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  
ttcggcttcgtgaaagccagatacaaggggttgctgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                                                                                                                                                  >  1:2271‑M2/273‑275 (MQ=255)
  gtataagtgacaagtcagatacaatggnntgctgaaaaaaggtaaccaacttgcgatgtnaatcactgtgggcaacctgtttcagaaggaccaaatgttacgtcagtgggagagatctcaataaaaactggcganaacgccttaaatggcgaagaaacggtctaaataggcggagtcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTa                                                                                                                                                                                                                                                                                  <  3:65839‑M2/3‑1 (MQ=255)
      ccccgggaaaGTGAGCCTCGGAAACCGTCNNNTGTCCCCCGATACTTCGGCACCGAATCTTACGTTTATTTATGTTCAGCCGGGCCGGGCTAACCGTTCAGTTTGGGAGCTGGATAACCGCGCGCCAAATATTGTGTCGTTCATCAGCCAGCGGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTTGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaag                                                                                                                                                                                                                                                                            <  3:154216/268‑5 (MQ=255)
                     gCTGGTAAACCCGCAGATTTCACCCGAGCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccc                                                                                                                                                                                                                                                             >  1:108920‑M2/1‑255 (MQ=255)
                             aCCCGCAGATTTCACCCGATCTGTCGGAACCGAATCGTACCGTTATTTATGGGCCGCCGGGCCGGGCTAACCGGTCAGGTTGGTATCTGTAGAACCGCGCGCCAAAGATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGCCGATTTGCCTAAggaaggtgcgaacaag                                                                                                                                                                                                                                                                 >  1:147822‑M2/1‑247 (MQ=255)
                               tgttgaaaatcgataaccaattggcgatgttattcacgattgggcaacggtttcgggcgtagcgaatgatacgtaagtgggagagatctcactaaaaactggggataacgcctgaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGc                                                                                                                                                                                                                                                    <  4:208655‑M2/33‑1 (MQ=255)
                                  tgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                                                                 <  1:72195‑M2/4‑1 (MQ=255)
                                   aGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                                                                                                                                               <  2:179343‑M2/275‑35 (MQ=255)
                                          gataaccaactggcgatgttattcacgctggccaaccggtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCg                                                                                                                                                                                                                                         <  2:451879‑M2/44‑1 (MQ=255)
                                                                        gccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTg                                                                                                                                                                                                                            >  1:156464‑M2/201‑257 (MQ=255)
                                                                                  ccgccgGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcg                                                                                                                                                                                                                                                                       <  2:221728‑M2/204‑11 (MQ=255)
                                                                                      cgggccgggcTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaaca                                                                                                                                                                                                                                                                   >  4:221724‑M2/1‑190 (MQ=255)
                                                                                             ggcTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                                                                                                                                                      <  1:53387‑M2/274‑92 (MQ=255)
                                                                                             ggcTAACCGTTAAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                                                                                                                                                      >  2:315447‑M2/1‑183 (MQ=255)
                                                                                                                            aaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccc                                                                                                                                                                                                                                                                                    <  5:92608‑M2/1‑1 (MQ=255)
                                                                                                                             aaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                                                                                                                                                   <  6:303807‑M2/2‑1 (MQ=255)
                                                                                                                               aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                                                                 <  8:317604‑M2/4‑1 (MQ=255)
                                                                                                                               aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                                                                 >  7:454176‑M2/146‑149 (MQ=255)
                                                                                                                                    gggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGc                                                                                                                                                                                                                                                                            >  5:341699‑M2/141‑149 (MQ=255)
                                                                                                                                       tatTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtg                                                                                                                                                                                                                                                                         >  7:113413‑M2/1‑141 (MQ=255)
                                                                                                                                             ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATgg                                                                                                                                                                                                                                                                   <  8:35156‑M2/18‑1 (MQ=255)
                                                                                                                                                 atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt                                                                                                                                 <  2:251813‑M2/275‑145 (MQ=255)
                                                                                                                                                   catcagccatcagcCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccc                                                                                                                                                                                                                                                             <  8:248394‑M2/149‑21 (MQ=255)
                                                                                                                                                      cagccatcagccGCTGGAATAAAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctga                                                                                                                                                                                                                                                          >  5:113600‑M2/1‑126 (MQ=255)
                                                                                                                                                          catcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatg                                                                                                                                                                                                                                                      <  5:189157‑M2/149‑28 (MQ=255)
                                                                                                                                                           gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                                                                                                                                                <  3:45665‑M2/69‑1 (MQ=255)
                                                                                                                                                             aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCa                                                                                                                                                                                                                                                   >  5:401195‑M2/116‑149 (MQ=255)
                                                                                                                                                              aggcccttgaaGATAACCGTTAACTTAATAAACTGGTGGCGTGGGCATGGTTTAACGTCCGTCTGACCTCTCGCACCCTTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagca                                                                                                                    >  1:10511‑M2/6‑118 (MQ=255)
                                                                                                                                                              agccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaa                                                                                                                                                                                                                                                                     <  6:378991‑M2/130‑13 (MQ=255)
                                                                                                                                                                 gtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                                                                 >  6:316593‑M2/112‑115 (MQ=255)
                                                                                                                                                                  tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCAtt                                                                                                                                                                                                                                              <  7:309625‑M2/39‑1 (MQ=255)
                                                                                                                                                                     ggAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                                                                                                                                           >  5:371369‑M2/1‑111 (MQ=255)
                                                                                                                                                                      aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaactgactgagtcagccgagaagaatttccccgcttattcgcaccttccCt                                                                                                                                                                                                                                                                                   <  5:308602‑M2/2‑1 (MQ=255)
                                                                                                                                                                      aaggagcggattcaaggcgtgannaggaanaaaaatcggcccaaccttgagaaaatgaaatgacggcaagagcccaaaaaaatttccccgcttcttcgccacttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCCGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGa                                                                                                            <  3:19987‑M2/169‑1 (MQ=255)
                                                                                                                                                                        atatAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc                                                                                                                                                                                                                                        >  5:276450‑M2/1‑108 (MQ=255)
                                                                                                                                                                          ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttcgCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTg                                                                                                                                                                                                                                      <  8:285803‑M2/47‑1 (MQ=255)
                                                                                                                                                                          ggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCTCTGCGCTTACCTGCACCGACACCGAAg                                                                                                                                                                                                              <  2:68399‑M2/71‑1 (MQ=255)
                                                                                                                                                                           gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgaca                                                                                                                                                                                                                    >  4:265948‑M2/102‑166 (MQ=255)
                                                                                                                                                                            ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGACGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCg                                                                                                      >  2:414456‑M2/101‑275 (MQ=255)
                                                                                                                                                                                     cTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccggcagtggattcagcagtaagcgccgtcagaccagaaaagaga                                                                                                                                          >  2:148919‑M2/1‑95 (MQ=255)
                                                                                                                                                                                     cTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                                                                                                                                                >  2:113212‑M2/1‑95 (MQ=255)
                                                                                                                                                                                        aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                                                                                                                                                         >  6:158486‑M2/1‑92 (MQ=255)
                                                                                                                                                                                        aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                                                                                                                                                         <  5:158486‑M2/132‑41 (MQ=255)
                                                                                                                                                                                          ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccga                                                                                                                                                                                                                      <  8:326173‑M2/63‑1 (MQ=255)
                                                                                                                                                                                            aaCTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                                                                                                                                                    <  8:230972‑M2/149‑62 (MQ=255)
                                                                                                                                                                                               tggtggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggtt                                                                                                                                                                                                                 <  6:57850‑M2/149‑65 (MQ=255)
                                                                                                                                                                                                   ggggTGGGCATGGTTTAACGGCCTGCTGTCCATGCTCACCCGTTTGTATATTAAAGGTAACGGCATTGTCTGTTTGCCTAAggaaggtgctaacaagtccctgttatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgag                                                                               >  2:33585‑M2/1‑81 (MQ=255)
                                                                                                                                                                                                       tGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                                                                                                                                                         >  7:248394‑M2/1‑77 (MQ=255)
                                                                                                                                                                                                         ggCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagaacatgtttgtcatctggagccatagaacagggttcatc                                                                                                                                                                                                             <  4:349489‑M2/143‑69 (MQ=255)
                                                                                                                                                                                                            agggttTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                                                                                                                                                    <  5:225265‑M2/147‑78 (MQ=255)
                                                                                                                                                                                                             tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                                                                                                                                                         >  2:349494‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                             tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagcca                                                                                                                                                                                                                             >  4:543462‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                                aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGccc                                                                                                                                                                                                >  7:204995‑M2/65‑149 (MQ=255)
                                                                                                                                                                                                                   aaCGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                                                                                                                                                   <  2:128458‑M2/175‑111 (MQ=255)
                                                                                                                                                                                                                     tgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCtt                                                                                                                                                                                                                                 >  7:34101‑M2/60‑111 (MQ=255)
                                                                                                                                                                                                                      gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTga                                                                                                                                                                                          >  7:291753‑M2/59‑149 (MQ=255)
                                                                                                                                                                                                                       gCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagc                                                                                                                                                               >  4:128457‑M2/1‑61 (MQ=255)
                                                                                                                                                                                                                        ccTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtccctcatggagcagattctgccatggcaaaacatggttgaagtcatcgaccccttttaccccaaggctg                                                            <  4:50184‑M2/273‑214 (MQ=255)
                                                                                                                                                                                                                        ccTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                                                                                                                                                        <  7:63034‑M2/149‑90 (MQ=255)
                                                                                                                                                                                                                        agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTc                                                                                                                                                                                                                                                      <  8:115995‑M2/31‑1 (MQ=255)
                                                                                                                                                                                                                           gctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                                                                                                                                                                 >  7:437074‑M2/1‑57 (MQ=255)
                                                                                                                                                                                                                            atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAg                                                                                                                                                                                                              <  8:20959‑M2/71‑1 (MQ=255)
                                                                                                                                                                                                                              gACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                                                                                                                                                        >  2:527270‑M2/1‑54 (MQ=255)
                                                                                                                                                                                                                                  tCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggc                                                <  2:50727‑M2/275‑226 (MQ=255)
                                                                                                                                                                                                                                    gcgcACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                                                                                                                                                            >  7:399410‑M2/1‑48 (MQ=255)
                                                                                                                                                                                                                                    actgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgaca                                                                                                                                                                                                                    <  8:194869‑M2/65‑1 (MQ=255)
                                                                                                                                                                                                                                        aCCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattca                                                                                                                                                                        <  8:381332‑M2/149‑106 (MQ=255)
                                                                                                                                                                                                                                          ccGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                                                                                                                                                           >  8:184480‑M2/1‑42 (MQ=255)
                                                                                                                                                                                                                                          ccGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                                                                                                                                                           <  7:184480‑M2/112‑71 (MQ=255)
                                                                                                                                                                                                                                           cGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttat                                        >  2:50184‑M2/1‑41 (MQ=255)
                                                                                                                                                                                                                                             gacgagaaggatttccccgcttattcgcacctgccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACctgct                                       <  1:37635‑M2/238‑1 (MQ=255)
                                                                                                                                                                                                                                                 agaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGACCCGCCATCTGGCGATTATCGTTaa                                                                                                                                                               <  6:225413‑M2/118‑1 (MQ=255)
                                                                                                                                                                                                                                                    atTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                                                                                                                                                      <  5:319805‑M2/91‑60 (MQ=255)
                                                                                                                                                                                                                                                     ttAAAGGTAACGGTATTGTCGATTTGCCCAAggaaggggggaaaagttccctgatatgagttcctgcttggcatctggatccatataacaggtttcataatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgcaatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaa                              >  4:50726‑M2/1‑31 (MQ=255)
                                                                                                                                                                                                                                                      tAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaac                             <  2:241803‑M2/274‑245 (MQ=255)
                                                                                                                                                                                                                                                       atttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcg                                                                                                                                                                                                           <  4:444602‑M2/74‑1 (MQ=255)
                                                                                                                                                                                                                                                        tttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGaa                                                                                                                                                        <  7:99500‑M2/125‑1 (MQ=255)
                                                                                                                                                                                                                                                           gTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                                                                                                                                               <  5:245073‑M2/123‑99 (MQ=255)
                                                                                                                                                                                                                                                           gTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagt                                                                                                                                                                               >  6:245073‑M2/1‑25 (MQ=255)
                                                                                                                                                                                                                                                               gcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTc                                                                                                                                                                                                                                            >  8:47063‑M2/18‑58 (MQ=255)
                                                                                                                                                                                                                                                               cGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                                                                                                                                                 <  8:89473‑M2/149‑129 (MQ=255)
                                                                                                                                                                                                                                                                  cATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa                                                                                                                                              >  6:183613‑M2/1‑18 (MQ=255)
                                                                                                                                                                                                                                                                    ttGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga                                                                                                                                            >  5:57850‑M2/1‑16 (MQ=255)
                                                                                                                                                                                                                                                                     tGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaacagagattttcttgtcccgcatggagccgattctgccatcgcaaaacatggtgngagtcatcaagcagttttaccacacggctggtaatggccggcgacactacccgctggaaaccagtcaacgcattcaa             <  3:119868‑M2/275‑261 (MQ=255)
                                                                                                                                                                                                                                                                      aagagacagcctaaggaaggtggaaaaaagtccctgatattatgtcatgtttgtcatctggggccatagaacagggttaatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatgttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaaccatgctacgcattcact            >  4:404380‑M2/9‑14 (MQ=255)
                                                                                                                                                                                                                                                                       gcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcg                                                                                                                                         >  5:447237‑M2/10‑149 (MQ=255)
                                                                                                                                                                                                                                                                         gATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttt                                                                         >  2:26848‑M2/1‑11 (MQ=255)
                                                                                                                                                                                                                                                                         accttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggc                                                                                                                                       <  6:401195‑M2/142‑1 (MQ=255)
                                                                                                                                                                                                                                                                         accttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATg                                                                                           >  4:166407‑M2/8‑193 (MQ=255)
                                                                                                                                                                                                                                                                           tttGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                                                                                                                                                 >  7:223477‑M2/1‑9 (MQ=255)
                                                                                                                                                                                                                                                                           cttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGc       <  2:196420‑M2/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTcc                                                                                                                                  >  7:142055‑M2/3‑149 (MQ=255)
                                                                                                                                                                                                                                                                              ccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTcc                                                                                                                                  <  7:237987‑M2/147‑1 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAtgaaggtgcgaacaagtccctgatattagatcatgtttggcatttgggaccacaggaaaggggtcatcatgggtcatcaactcaccgtcgacgacagggaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaaccatgctacgcattcactgcatgcagca  >  4:333073‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgaggtatcgtttttcatctggagccatagaacagggttcatgatgagtcgtcaacttaacttcgccgacagtgaattcagaggtgaccgcggtcggaccgtaaaagagattgtcttgtcccgcatggggcaggttctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaaccatgctacgcattcactgcatgcagca  >  4:179350‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc                                                                                                                                >  5:143300‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc                                                                                                                                >  7:36580‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                                                                                                                                         <  6:346302‑M2/108‑105 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                                                                                                                                                 >  6:441049‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                                cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                                                                                                                                                 <  5:441049‑M2/84‑81 (MQ=255)
                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                                  
AGCATTACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCAC  >  NC_000913/3992433‑3992979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.