Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,992,705 IS5 (+) +4 bp 100% coding (1553‑1556/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)100 (1.010) 81/322 NT 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3992705 = 0 (0.000)coding (1553/2547 nt) cyaA adenylate cyclase
* ? NC_000913 = 2290113NA (NA)137 (1.390) 96/322 NT 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3992708 0 (0.000)coding (1556/2547 nt) cyaA adenylate cyclase

Only 100 of 290 total aligned reads displayed.

ACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCAC  >  NC_000913/3992439‑3992979
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                               
ccccgggaaaGTGAGCCTCGGAAACCGTCNNNTGTCCCCCGATACTTCGGCACCGAATCTTACGTTTATTTATGTTCAGCCGGGCCGGGCTAACCGTTCAGTTTGGGAGCTGGATAACCGCGCGCCAAATATTGTGTCGTTCATCAGCCAGCGGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTTGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaag                                                                                                                                                                                                                                                                            <  3:154216/268‑5 (MQ=255)
              ctttggtAAACCCGTAGATTTCNNCCTACNGGTCGGAGCCGAAGTTTTCAGTTTTGTATGTGCCGCCGGGCCTGTGTAACCGTTCAGGGTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGTACATCAGGCATCAGCCTCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtcc                                                                                                                                                                                                                                                              >  3:12331‑M2/4‑256 (MQ=255)
               gCTGGTAAACCCGCAGATTTCACCCGAGCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccc                                                                                                                                                                                                                                                             >  1:108920‑M2/1‑255 (MQ=255)
                       aCCCGCAGATTTCACCCGATCTGTCGGAACCGAATCGTACCGTTATTTATGGGCCGCCGGGCCGGGCTAACCGGTCAGGTTGGTATCTGTAGAACCGCGCGCCAAAGATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGCCGATTTGCCTAAggaaggtgcgaacaag                                                                                                                                                                                                                                                                 >  1:147822‑M2/1‑247 (MQ=255)
                        ttgctgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcagagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGCCGTGTCg                                                                                                                                                                                                                                                     >  1:37107‑M2/243‑274 (MQ=255)
                         tgttgaaaatcgataaccaattggcgatgttattcacgattgggcaacggtttcgggcgtagcgaatgatacgtaagtgggagagatctcactaaaaactggggataacgcctgaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGc                                                                                                                                                                                                                                                    <  4:208655‑M2/33‑1 (MQ=255)
                         tgctgaaaaacgatgaccaacgggcgatgttattcccgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCg                                                                                                                                                                                                                                                     <  2:114058‑M2/32‑1 (MQ=255)
                             aGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcat                                                                                                                                                                                                                                               <  2:179343‑M2/275‑35 (MQ=255)
                               aattaaCCCGATCTCACGGAACCGAATCTGACCTTTGTTTAGGTGCCGCCTGGCCAGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGACATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGAGTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                                                                                                                                             >  2:500669‑M2/3‑239 (MQ=255)
                                           ctctcGGAACTGAATCTGACCTTGAGTTAGGTTCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCAAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATCAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                                                                                                                                                  >  2:505037‑M2/1‑227 (MQ=255)
                                              ctgcgaagttattcgcgctgtacaacctggttaggtcggcacaaaagatacgtcagtgggagagatctcaccaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCTACGTGTCGCACCATTGCCCGCTGCGCTTAcc                                                                                                                                                                                                                              <  4:351264‑M2/55‑1 (MQ=255)
                                                   atgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaacactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCCTTTCCCGCTCCGCTTACCTgcc                                                                                                                                                                                                                          >  1:18303‑M2/216‑273 (MQ=255)
                                                                  gccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttacccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCAACATTTCCCGCTGCGCttacctgcaccgacaccgcaaccgc                                                                                                                                                                                                          >  1:70568‑M2/201‑268 (MQ=255)
                                                                            ccgccgGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcg                                                                                                                                                                                                                                                                       <  2:221728‑M2/204‑11 (MQ=255)
                                                                                cgggccgggcTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaaca                                                                                                                                                                                                                                                                   >  4:221724‑M2/1‑190 (MQ=255)
                                                                                       ggcTAACCGTTAAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                                                                                                                                                      >  2:315447‑M2/1‑183 (MQ=255)
                                                                                                                    tccgCGCGCCAAATATTGAATCGTTCATCGGCCATAAGCCGCGGGAATATAACCTTTACCTGAGTAACCCGGTTGCGTGGGAATGGTTTAACGGCCTGCGAACCTCGCGCACCCGTTTGGATAGTAAAGGTAACGGCAGTGTGGATTTGCCTAAggaagatgcgaacaagtccctgttatgagatcatgtttgtcatctggggccatagaacagggttcatcatgagtcatcaactgaccttcgccgacagtgaattcagcagtaagcaccgtca                                                                                                                                                        >  4:444887‑M2/2‑154 (MQ=255)
                                                                                                                        cgcgcCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCCTGGTTTAACGGCCTGCTGACCTCGCGCACCCGCTGGTATCTTAAAGGTAACGGCATTGTCCATTTGCCTAAggnaggtncgaacaagtccctgatatgagattatgtttgtcatcnggg                                                                                                                                                                                                                                 <  4:516063‑M2/198‑49 (MQ=255)
                                                                                                                         aactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                                                                                                                                                 >  7:323167‑M2/146‑149 (MQ=255)
                                                                                                                                gataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAg                                                                                                                                                                                                                                                                          <  7:78155‑M2/11‑1 (MQ=255)
                                                                                                                                 tatTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtg                                                                                                                                                                                                                                                                         >  7:113413‑M2/1‑141 (MQ=255)
                                                                                                                                  atTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAg                                                                                                                                                                                                                                                                                >  7:175984‑M2/1‑140 (MQ=255)
                                                                                                                                     gAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaa                                                                                                                                                                                                                                                                     >  7:356743‑M2/1‑137 (MQ=255)
                                                                                                                                       ccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATgg                                                                                                                                                                                                                                                                   <  8:35156‑M2/18‑1 (MQ=255)
                                                                                                                                         ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTc                                                                                                                                                                                                                                                                 >  5:225413‑M2/130‑149 (MQ=255)
                                                                                                                                           atcatcAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt                                                                                                                                 <  2:251813‑M2/275‑145 (MQ=255)
                                                                                                                                            aatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGa                                                                                                                                                   <  2:465857‑M2/130‑1 (MQ=255)
                                                                                                                                               tcagccatcagccGCTGGAATATAACCGTTACTTGAATAAACTGGTGGCGTGGGCAGGGTTTAAAGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                                                                                                                                                      >  2:338966‑M2/1‑127 (MQ=255)
                                                                                                                                                 agccatcagccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgat                                                                                                                                                                                                                                                         >  5:454945‑M2/1‑125 (MQ=255)
                                                                                                                                                     gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                                                                                                                                                                <  3:45665‑M2/69‑1 (MQ=255)
                                                                                                                                                        aggcccttgaaGATAACCGTTAACTTAATAAACTGGTGGCGTGGGCATGGTTTAACGTCCGTCTGACCTCTCGCACCCTTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagca                                                                                                                    >  1:10511‑M2/6‑118 (MQ=255)
                                                                                                                                                        agccGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaa                                                                                                                                                                                                                                                                     <  6:378991‑M2/130‑13 (MQ=255)
                                                                                                                                                            tctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCAtt                                                                                                                                                                                                                                              >  5:409706‑M2/111‑149 (MQ=255)
                                                                                                                                                            gCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatg                                                                                                                                                                                                                                              <  6:442919‑M2/149‑36 (MQ=255)
                                                                                                                                                             cTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgt                                                                                                                                                                                                                                             >  8:375357‑M2/1‑113 (MQ=255)
                                                                                                                                                               ggAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                                                                                                                                           >  8:320005‑M2/1‑111 (MQ=255)
                                                                                                                                                               ggAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                                                                                                                                                           >  5:71082‑M2/1‑111 (MQ=255)
                                                                                                                                                                gAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctga                                                                                                                                                                                                                                                          >  5:145361‑M2/1‑110 (MQ=255)
                                                                                                                                                                aaggagcggattcaaggcgtgannaggaanaaaaatcggcccaaccttgagaaaatgaaatgacggcaagagcccaaaaaaatttccccgcttcttcgccacttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCCGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGa                                                                                                            <  3:19987‑M2/169‑1 (MQ=255)
                                                                                                                                                                   aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCt                                                                                                                                                                                                                                       <  8:277428‑M2/46‑1 (MQ=255)
                                                                                                                                                                     gctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGAttt                                                                                                         >  2:145115‑M2/102‑273 (MQ=255)
                                                                                                                                                                      ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGACGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCg                                                                                                      >  2:414456‑M2/101‑275 (MQ=255)
                                                                                                                                                                           ttACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatct                                                                                                                                                                                                                                    <  4:113211‑M2/144‑46 (MQ=255)
                                                                                                                                                                              aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTg                                                                                                                                                                                                                            >  8:187112‑M2/93‑149 (MQ=255)
                                                                                                                                                                                gcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGca                                                                                                                                                                                                                          >  6:422540‑M2/91‑149 (MQ=255)
                                                                                                                                                                                  aaTAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                                                                                                                                                         >  6:158486‑M2/1‑92 (MQ=255)
                                                                                                                                                                                     tacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgggaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCtt                                                                                       <  2:65858‑M2/190‑1 (MQ=255)
                                                                                                                                                                                     taagggagaaaaaatcggctcaaacatgaagaaatgaaaggaatgagtcagccgagaagaattgccccgcttagtcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCtt                                                                                       <  4:174909‑M2/190‑1 (MQ=255)
                                                                                                                                                                                           agaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACGCCGaa                                                                                                                                                                                                               <  8:286253‑M2/70‑1 (MQ=255)
                                                                                                                                                                                                gTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacattcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttgcttgtcccgcctggagcagattctgacatggcaaaacatggtggaactcatcgagccg                                                                            <  4:414682‑M2/275‑198 (MQ=255)
                                                                                                                                                                                                aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGgcgc                                                                                                                                                                                                          >  8:237987‑M2/75‑149 (MQ=255)
                                                                                                                                                                                                 tGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                                                                                                                                                         >  7:248394‑M2/1‑77 (MQ=255)
                                                                                                                                                                                                 tGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                                                                                                                                                         >  5:442919‑M2/1‑77 (MQ=255)
                                                                                                                                                                                                   tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGctct                                                                                                                                                                                                       >  8:112830‑M2/72‑149 (MQ=255)
                                                                                                                                                                                                       tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga                                                                                                                                                                                                         >  2:349494‑M2/1‑71 (MQ=255)
                                                                                                                                                                                                         gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaa                                                                                                                                                                                                 <  5:190768‑M2/149‑81 (MQ=255)
                                                                                                                                                                                                         gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcat                                                                                                                                                                                                              >  6:241156‑M2/1‑69 (MQ=255)
                                                                                                                                                                                                                  ccTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagcttttcttgtccctcatggagcagattctgccatggcaaaacatggttgaagtcatcgaccccttttaccccaaggctg                                                            <  4:50184‑M2/273‑214 (MQ=255)
                                                                                                                                                                                                                    tgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgctatgagatccagtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgc                                                                                                                                                                                      >  6:190768‑M2/1‑58 (MQ=255)
                                                                                                                                                                                                                    tgctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggccatagaaaagggttcatcatgagtcatcaacttaccttcgccgacagttaattcagcagtaagcgccgtcagaccagacaagagattttcttgtcccgcatggagcagattctgccatggccaaacctggaggaagtcatcgagccgttttcccccaaggcgggtaat                                                         <  4:129711‑M2/274‑217 (MQ=255)
                                                                                                                                                                                                                    aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATc                                                                                                                                                                                      <  7:303133‑M2/95‑1 (MQ=255)
                                                                                                                                                                                                                     gctgACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatc                                                                                                                                                                                                                                                 >  7:437074‑M2/1‑57 (MQ=255)
                                                                                                                                                                                                                      atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAg                                                                                                                                                                                                              >  7:20959‑M2/53‑123 (MQ=255)
                                                                                                                                                                                                                        gACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaa                                                                                                                                                                                                                        >  2:527270‑M2/1‑54 (MQ=255)
                                                                                                                                                                                                                              gcgcACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaa                                                                                                                                                                            >  7:399410‑M2/1‑48 (MQ=255)
                                                                                                                                                                                                                                   ggtggccgagaagaatttccccccttagtccacccttccCTAAGTTGCAGGGGATGGTCGCCGACGGGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTTTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACctg                                         <  4:90576‑M2/236‑1 (MQ=255)
                                                                                                                                                                                                                                    ccGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagc                                                                                                                                                                      <  7:126964‑M2/149‑108 (MQ=255)
                                                                                                                                                                                                                                            gaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAAc                                                                                                                                                              <  7:474568‑M2/119‑1 (MQ=255)
                                                                                                                                                                                                                                            atatTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                                                                                                                                                              <  5:333977‑M2/149‑116 (MQ=255)
                                                                                                                                                                                                                                            atatTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcg                                                                                                                                                              <  5:173406‑M2/149‑116 (MQ=255)
                                                                                                                                                                                                                                             aagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGa                                             >  2:90577‑M2/30‑261 (MQ=255)
                                                                                                                                                                                                                                              atTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaca                                                                                                                                                                                                                      >  6:319805‑M2/1‑32 (MQ=255)
                                                                                                                                                                                                                                               ttAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagca                                                                                                                                                                     <  5:252139‑M2/139‑109 (MQ=255)
                                                                                                                                                                                                                                               ttAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg                                                                                                                                                                                                                   >  5:371980‑M2/1‑31 (MQ=255)
                                                                                                                                                                                                                                                tAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgctggaaac                             <  2:241803‑M2/274‑245 (MQ=255)
                                                                                                                                                                                                                                                 aaaGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtc                                                                                                                                                         <  7:44971‑M2/149‑121 (MQ=255)
                                                                                                                                                                                                                                                  tttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGaa                                                                                                                                                        <  8:204995‑M2/125‑1 (MQ=255)
                                                                                                                                                                                                                                                     ccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAatat                                                                                                                                                     <  7:187112‑M2/128‑1 (MQ=255)
                                                                                                                                                                                                                                                         gcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTc                                                                                                                                                                                                                                            >  8:47063‑M2/18‑58 (MQ=255)
                                                                                                                                                                                                                                                         cGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga                                                                                                                                          >  4:340507‑M2/1‑21 (MQ=255)
                                                                                                                                                                                                                                                         cGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                                                                                                                                                 <  8:89473‑M2/149‑129 (MQ=255)
                                                                                                                                                                                                                                                           gCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaa                                                                                                                                               <  5:311993‑M2/149‑131 (MQ=255)
                                                                                                                                                                                                                                                            cATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa                                                                                                                                              >  6:183613‑M2/1‑18 (MQ=255)
                                                                                                                                                                                                                                                               tGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagcc                                                                             <  4:26848‑M2/211‑197 (MQ=255)
                                                                                                                                                                                                                                                                   gATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttt                                                                         >  2:26848‑M2/1‑11 (MQ=255)
                                                                                                                                                                                                                                                                   accttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggc                                                                                                                                       <  6:401195‑M2/142‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tttGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgaca                                                                                                                                                                                 <  8:223477‑M2/105‑97 (MQ=255)
                                                                                                                                                                                                                                                                     cttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGc       <  2:196420‑M2/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                          cTAAggaaggtgtgaaacagtccctgatatgagattatgtttgtcatctggagacatagaacagggttcatcatgagtcatcaacttaccttcgccgacagggaattcagcagtaagctccgtcagatcagcaaagagatttgcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatctagccgttttaccccaaggctggtaatggccggcgaccttatccgcttgaaaccatgctacgcattcactgcatgcagca  >  1:96873‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                          cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtc                                                                                                                                >  7:230972‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                          cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattc                                                                                                                                                                         >  5:346302‑M2/1‑4 (MQ=255)
                                                                                                                                                                                                                                                                          cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat                                                                                                                                                                                                    <  5:301193‑M2/81‑78 (MQ=255)
                                                                                                                                                                                                                                                                          cTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGc                                                                                                                                >  7:378657/1‑149 (MQ=255)
                                                                                                                                                                                                                                                                           tAAggagggtgcgaaaaagtgcctggtatgaggtcatgtttgtcatctggggccaaagaacagagttaatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcagggagcggattctgccatgacaaaacatgatggaagtcatcgagccgttttaacccaaggctggtaatggccggcgaccttatccgctggaaaccatgctacgcattaactgcatgcagca  >  4:179992‑M2/1‑3 (MQ=255)
                                                                                                                                                                                                                                                                           tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgt                                                                                                                                                          >  8:431962‑M2/1‑3 (MQ=255)
                                                                                                                                                                                                                                                                            aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct                                   >  1:48820‑M2/1‑2 (MQ=255)
                                                                                                                                                                                                                                                                            aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc                                                                                                                              >  5:118847‑M2/1‑2 (MQ=255)
                                                                                                                                                                                                                                                                            aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtccc                                                                                                                              <  8:163858‑M2/149‑148 (MQ=255)
                                                                                                                                                                                                                                                                            aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                                                                                                                                                      <  6:350599‑M2/77‑76 (MQ=255)
                                                                                                                                                                                                                                                                             aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccg                                                                                                                             <  6:254294‑M2/149‑149 (MQ=255)
                                                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                                                               
ACCAGGTAAAGTGACGCTGGTAAACCCGCAGATTTCACCCGATCTCTCGGAACCGAATCTGACCTTTATTTATGTGCCGCCGGGCCGGGCTAACCGTTCAGGTTGGTATCTGTATAACCGCGCGCCAAATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTCCGCAATCAGGTGGTGCATTTCGATTTCCGTAAGCTGGATGTCTTCAGCTTTGGCGAGAATCAAAATTGCCTGGTAGGTAGCGTTGACCTGCTGTACCGCAACTCGTGGAACGAAGTGCGTACGCTGCAC  >  NC_000913/3992439‑3992979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.