New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2330956 =	52 (1.020)	4 (0.080)	4/238	NT	7.5%	pseudogene (3447/4605 nt)	yfaS	pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein
	?	NC_000913	2330992 =	50 (1.040)					pseudogene (3411/4605 nt)	yfaS	pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein

CTTCATCCAACCCTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCTGAATCATC  >  NC_000913/2330808‑2331103                                                                                                                                                     |                                                                                                                                                    cTTCATCCAACCCTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGtt                                                                                                                                                     >  2:193179/1‑149 (MQ=255)  gatcatcaaagtgccgccgctaacgacattcgtcagatgattcaggataaccgtctgcggctgatgcaactggcggggcccggagcgcgctttacctggtggggtgaagatggcaatggtgacgccttccttacggcatgggcatggTa                                                                                                                                                    <  3:429679‑M1/2‑1 (MQ=255)        cAACCCTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGa                                                                                                                                              >  1:48448/1‑149 (MQ=255)          aCCCTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATc                                                                                                                                            <  2:388301/149‑1 (MQ=255)            ccTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGc                                                                                                                                          >  1:304911/1‑149 (MQ=255)                    caacGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCctggctgg                                                                                                                                  <  1:40840/149‑1 (MQ=255)                     aacGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCtggctggc                                                                                                                                 >  3:282101/1‑149 (MQ=255)                      acGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGcc                                                                                                                                <  2:420884/149‑1 (MQ=255)                       cGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCt                                                                                                                               <  3:190395/149‑1 (MQ=255)                         ttttGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGc                                                                                                                             >  3:157774/1‑149 (MQ=255)                              cACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTc                                                                                                                        <  3:136472/149‑1 (MQ=255)                                 ggCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTGATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGc                                                                                                                     <  3:449740/149‑1 (MQ=255)                                       ttCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTAcca                                                                                                               >  2:442589/1‑149 (MQ=255)                                            ctcCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTAccatgccc                                                                                                          <  4:157774/149‑1 (MQ=255)                                                   gcCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGt                                                                                                   >  4:399899/1‑149 (MQ=255)                                                    cccATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTa                                                                                                  >  2:469662/1‑149 (MQ=255)                                                            aGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGc                                                                                          >  3:320827/1‑149 (MQ=255)                                                              cACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGt                                                                                        >  1:83422/1‑149 (MQ=255)                                                                     gcCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCAtt                                                                                 <  4:282101/149‑1 (MQ=255)                                                                     aactggcggggcccggagcgcgctttacctggtcgggtgaagatggcaatggtgacgccttccttacggcatgggcatggTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGt                                                                                                                   <  4:60108‑M1/35‑1 (MQ=255)                                                                     aactggcggggcccggagcgcgctttacctggtcgggtgaagatggcaatggtgacgccttccttacggcatgggcatggTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGt                                                                                                                   >  3:60108‑M1/81‑115 (MQ=255)                                                                            ggggcccggagcgcgctttacctggtggggtgaagatggcaatggtgacgccttccttacggcatgggcatggTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGc                                                                                                                     <  1:169208‑M1/33‑1 (MQ=255)                                                                            ggggcccggagcgcgctttacctggtggggtgaagatggcaatggtgacgccttccttacggcatgggcatggTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGc                                                                                                                     >  2:169208‑M1/74‑106 (MQ=255)                                                                              aaTAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTc                                                                        >  2:106414/1‑149 (MQ=255)                                                                               aTAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCa                                                                       <  2:48448/149‑1 (MQ=255)                                                                                 aaCGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCAcc                                                                     >  4:272703/1‑149 (MQ=255)                                                                                               tgcctgcTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAgc                                                       <  1:442589/149‑1 (MQ=255)                                                                                                gcctgcTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAgcg                                                      >  3:326792/1‑149 (MQ=255)                                                                                                 cctgcTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTaaa                                                         <  3:6440/145‑1 (MQ=255)                                                                                                 cctgcTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTaaa                                                         >  4:6440/1‑145 (MQ=255)                                                                                                      tCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGcc                                                                              <  4:224080/119‑1 (MQ=255)                                                                                                      tCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGcc                                                                              >  3:224080/1‑119 (MQ=255)                                                                                                                tGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGcc                                      >  4:413564/1‑149 (MQ=255)                                                                                                                 gTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCATCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCa                                     >  4:286145/1‑149 (MQ=255)                                                                                                                    gAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGtt                                  <  3:272703/149‑1 (MQ=255)                                                                                                                    gAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGtt                                  >  1:398101/1‑149 (MQ=255)                                                                                                                    gAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGtt                                  <  4:158290/149‑1 (MQ=255)                                                                                                                    gAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGtt                                  >  3:163970/1‑149 (MQ=255)                                                                                                                       cATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCa                               >  2:405018/1‑149 (MQ=255)                                                                                                                          atGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGccc                                          <  4:223386/135‑1 (MQ=255)                                                                                                                          atGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGccc                                          >  3:223386/1‑135 (MQ=255)                                                                                                                               gcCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGc                       >  2:98135/1‑149 (MQ=255)                                                                                                                               gcCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGc                       >  4:429679/1‑149 (MQ=255)                                                                                                                               gcCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGc                       >  2:120850/1‑149 (MQ=255)                                                                                                                                ccAGTTTTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAGGCGCGCTCCGGGCCCCGCCCGTTGCATCAGCCGCa                      >  1:422265/1‑149 (MQ=255)                                                                                                                                ccAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCa                      >  4:165002/1‑149 (MQ=255)                                                                                                                                 cAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTaa                                                                                                 >  4:90803/1‑73 (MQ=255)                                                                                                                                 cAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTaa                                                                                                 <  3:90803/73‑1 (MQ=255)                                                                                                                                 cAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAgcgcg                                                    >  4:260267/1‑118 (MQ=255)                                                                                                                                 cAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAgcgcg                                                    <  3:260267/118‑1 (MQ=255)                                                                                                                                    tATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACg                  <  2:83422/149‑1 (MQ=255)                                                                                                                                           gttgttGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTcc                                                <  3:353390/112‑1 (MQ=255)                                                                                                                                           gttgttGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTcc                                                >  4:353390/1‑112 (MQ=255)                                                                                                                                           gttgttGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATcc           >  2:160941/1‑149 (MQ=255)                                                                                                                                            ttgttgCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCt          <  4:190996/149‑1 (MQ=255)                                                                                                                                            ttgttgCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCt          <  1:98135/149‑1 (MQ=255)                                                                                                                                            ttgttgCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCt          <  1:120850/149‑1 (MQ=255)                                                                                                                                               ttgCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCTGaa       <  3:399899/149‑1 (MQ=255)                                                                                                                                                 gCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCTGAatc     >  2:92604/1‑149 (MQ=255)                                                                                                                                                    ttACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCTGAatcatc  >  4:209323/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                    CTTCATCCAACCCTTTCAACAACGTTTTGCACGGCAAATTCATCTCCTGCGCCCATGCCAGCACCAGCGCCCGATGCAATAACGGCATGTTATCTGCCTGCTCCGCGTAGCTGTCGAGCATATGCTGCCAGTATTCCGGTTGTTGCGTTACGCCGATCGCCTGGCTGGCCTGCCAGTCGGCGTACCATGCCCATGCCGTAAGGAAGGCGTCACCATTGCCATCTTCACCCCACCAGGTAAAGCGCGCTCCGGGCCCCGCCAGTTGCATCAGCCGCAGACGGTTATCCTGAATCATC  >  NC_000913/2330808‑2331103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.