mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 93 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4534128 | 201 (1.180) | 7 (0.040) | 7/256 | NT | 3.4% | intergenic (‑75/+302) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment |
| ? | NC_000913 | = 4534171 | 195 (1.140) | intergenic (‑118/+259) | yjhX/yjhZ | UPF0386 family protein/pseudogene, rimK paralog, C‑terminal fragment | |||||
| * | ? | NC_000913 | = 4513364 | 118 (0.690) | 5 (0.030) | 5/242 | NT | 4.2% | coding (46/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4513381 | 114 (0.710) | coding (29/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4467063 = | 169 (0.990) | 3 (0.020) | 3/248 | NT | 1.7% | coding (184/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| ? | NC_000913 | 4467094 = | 185 (1.120) | coding (153/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor | |||||
| * | ? | NC_000913 | = 4459355 | 158 (0.920) | 6 (0.040) | 6/244 | NT | 4.0% | intergenic (+44/‑135) | pmbA/cybC | putative antibiotic peptide MccB17 maturation peptidase/pseudogene, truncated cytochrome b562; cytochrome b(562) |
| ? | NC_000913 | = 4459469 | 138 (0.850) | intergenic (+158/‑21) | pmbA/cybC | putative antibiotic peptide MccB17 maturation peptidase/pseudogene, truncated cytochrome b562; cytochrome b(562) | |||||
| * | ? | NC_000913 | = 4417460 | 163 (0.950) | 5 (0.030) | 5/242 | NT | 3.0% | coding (509/750 nt) | yjfP | acyl CoA esterase |
| ? | NC_000913 | = 4417479 | 172 (1.070) | coding (528/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | NC_000913 | = 4406802 | 145 (0.850) | 3 (0.020) | 3/246 | NT | 2.1% | coding (149/2442 nt) | rnr | exoribonuclease R, RNase R |
| ? | NC_000913 | = 4406858 | 134 (0.820) | coding (205/2442 nt) | rnr | exoribonuclease R, RNase R | |||||
| * | ? | NC_000913 | 4399474 = | 157 (0.920) | 3 (0.020) | 3/250 | NT | 1.9% | coding (223/951 nt) | miaA | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase |
| ? | NC_000913 | 4399547 = | 158 (0.950) | coding (296/951 nt) | miaA | delta(2)‑isopentenylpyrophosphate tRNA‑adenosine transferase | |||||
| * | ? | NC_000913 | = 4376625 | 164 (0.960) | 8 (0.050) | 6/246 | NT | 4.8% | coding (73/147 nt) | ecnB | entericidin B membrane lipoprotein |
| ? | NC_000913 | = 4376635 | 160 (0.970) | coding (83/147 nt) | ecnB | entericidin B membrane lipoprotein | |||||
| * | ? | NC_000913 | = 4285301 | 130 (0.810) | 3 (0.020) | 3/240 | NT | 2.3% | intergenic (‑88/+112) | yjcH/acs | DUF485 family inner membrane protein/acetyl‑CoA synthetase |
| ? | NC_000913 | = 4285378 | NA (NA) | noncoding (77/77 nt) | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP320 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | = 4241701 | 167 (0.980) | 4 (0.020) | 4/242 | NT | 2.4% | coding (554/1476 nt) | xylE | D‑xylose transporter |
| ? | NC_000913 | = 4241729 | 161 (1.000) | coding (526/1476 nt) | xylE | D‑xylose transporter | |||||