mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 132 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4636330 | 127 (0.670) | 4 (0.020) | 4/244 | NT | 2.9% | coding (324/690 nt) | creB | response regulator in two‑component regulatory system with CreC |
| ? | NC_000913 | = 4636367 | 146 (0.810) | coding (361/690 nt) | creB | response regulator in two‑component regulatory system with CreC | |||||
| * | ? | NC_000913 | 4608119 = | 127 (0.670) | 3 (0.020) | 3/246 | NT | 2.2% | coding (317/414 nt) | holD | DNA polymerase III, psi subunit |
| ? | NC_000913 | 4608161 = | 146 (0.810) | coding (359/414 nt) | holD | DNA polymerase III, psi subunit | |||||
| * | ? | NC_000913 | 4559226 = | 160 (0.840) | 3 (0.020) | 3/250 | NT | 1.8% | coding (301/1173 nt) | iadA | isoaspartyl dipeptidase |
| ? | NC_000913 | 4559289 = | 174 (0.950) | coding (238/1173 nt) | iadA | isoaspartyl dipeptidase | |||||
| * | ? | NC_000913 | 4542682 = | 145 (0.760) | 8 (0.050) | 8/240 | NT | 4.1% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 241 (1.360) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 4492699 | 173 (0.910) | 9 (0.050) | 7/250 | NT | 4.8% | coding (653/765 nt) | idnO | 5‑keto‑D‑gluconate‑5‑reductase |
| ? | NC_000913 | = 4492710 | 186 (1.010) | coding (642/765 nt) | idnO | 5‑keto‑D‑gluconate‑5‑reductase | |||||
| * | ? | NC_000913 | = 4457184 | 135 (0.710) | 5 (0.030) | 5/248 | NT | 3.7% | intergenic (+26/+130) | mpl/yjgA | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase/ribosome‑associated UPF0307 family protein |
| ? | NC_000913 | = 4457224 | NA (NA) | noncoding (40/84 nt) | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
| * | ? | NC_000913 | 4425590 = | 178 (0.940) | 3 (0.020) | 3/246 | NT | 1.7% | coding (71/315 nt) | priB | primosomal protein N |
| ? | NC_000913 | 4425637 = | 185 (1.020) | coding (118/315 nt) | priB | primosomal protein N | |||||
| * | ? | NC_000913 | = 4383657 | 202 (1.060) | 6 (0.030) | 6/240 | NT | 3.0% | intergenic (+37/‑182) | epmA/yjeM | Elongation Factor P Lys34 lysyltransferase/putative transporter |
| ? | NC_000913 | = 4383664 | 200 (1.130) | intergenic (+44/‑175) | epmA/yjeM | Elongation Factor P Lys34 lysyltransferase/putative transporter | |||||
| * | ? | NC_000913 | 4321539 = | 112 (0.590) | 3 (0.020) | 3/240 | NT | 2.7% | coding (158/453 nt) | phnG | ribophosphonate triphosphate synthase subunit |
| ? | NC_000913 | 4321583 = | 109 (0.620) | coding (114/453 nt) | phnG | ribophosphonate triphosphate synthase subunit | |||||
| * | ? | NC_000913 | 4318192 = | 162 (0.850) | 4 (0.020) | 4/246 | NT | 2.6% | coding (573/759 nt) | phnK | carbon‑phosphorus lyase complex subunit, putative ATP transporter ATP‑binding protein |
| ? | NC_000913 | 4318225 = | 147 (0.810) | coding (540/759 nt) | phnK | carbon‑phosphorus lyase complex subunit, putative ATP transporter ATP‑binding protein | |||||