New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 526253	NA (NA)	3 (0.040)	3/168	NT	100%	coding (2993/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	= 526279	0 (0.000)					coding (3019/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCG  >  NC_000913/526177‑526350                                                                             |                                                                                                  gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                            >  2:1923060‑M2/1‑100 (MQ=255) gAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACG                                                                            >  2:696805‑M2/1‑100 (MQ=255)   gCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGAC                                                                          <  2:1903271‑M2/100‑1 (MQ=255)    cGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                         >  1:334955‑M2/1‑100 (MQ=255)                                                                       aGCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtagtagtggtagtggt      <  1:717698‑M2/100‑68 (MQ=255)                                                                        gCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtg     <  2:476754‑M2/100‑69 (MQ=255)                                                                           aCTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggt  <  2:623151‑M2/100‑72 (MQ=255)                                                                             |                                                                                                  GAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCG  >  NC_000913/526177‑526350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.