New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 526253NA (NA)3 (0.040) 3/168 NT 100% coding (2993/4281 nt) rhsD Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 526279 0 (0.000)coding (3019/4281 nt) rhsD Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC  >  NC_000913/526180‑526377
                                                                                                   |                                                                                                  
cGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACC                                                                                                    >  1:334955‑M2/1‑100 (MQ=255)
                                                                   aGCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtagtagtggtagtggt                                 <  1:717698‑M2/100‑68 (MQ=255)
                                                                    gCCACTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtg                                <  2:476754‑M2/100‑69 (MQ=255)
                                                                       aCTGGTCGAGAGCCGCTACCTCTACGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggt                             <  2:623151‑M2/100‑72 (MQ=255)
                                                                                               cGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  1:239676‑M2/100‑96 (MQ=255)
                                                                                               cGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  1:860957‑M2/100‑96 (MQ=255)
                                                                                               cGACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  2:697538‑M2/100‑96 (MQ=255)
                                                                                                gACCagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcac     <  2:900809‑M2/99‑96 (MQ=255)
                                                                                                  ccagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcacacc  >  1:256853‑M2/1‑2 (MQ=255)
                                                                                                  ccagtggctcgccatgctgtatccgcgtgtagaacaccaggcggtgctggctgtcgtagtggtagtggtgggtccgctcgtcgtccgtccgtatcacac   <  2:447129‑M2/99‑98 (MQ=255)
                                                                                                   |                                                                                                  
CGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTATGGC  >  NC_000913/526180‑526377

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.