New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2842423 =NA (NA)3 (0.040) 3/164 NT NA noncoding (1/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2842453 = NA (NA)noncoding (31/79 nt) REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 110 total aligned reads displayed.

CGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAG  >  NC_000913/2842324‑2842521
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cagggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagg                                                                                                    <  1:2035568‑M1/1‑1 (MQ=255)
cagggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagg                                                                                                    <  2:1823521‑M1/1‑1 (MQ=255)
cagggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagg                                                                                                    <  1:1526922‑M1/1‑1 (MQ=255)
 agggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGc                                                                                                   <  2:1902490‑M1/2‑1 (MQ=255)
  gggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGcc                                                                                                  <  1:403177‑M1/3‑1 (MQ=255)
  gggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGc                                                                                                   <  2:1624521‑M1/2‑1 (MQ=255)
  cAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGcc                                                                                                  >  2:1056702/1‑100 (MQ=255)
  cAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGcc                                                                                                  >  2:557796/1‑100 (MQ=255)
   ggatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCg                                                                                                 >  1:690272‑M1/97‑100 (MQ=255)
    ggCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCgg                                                                                                >  1:1540991/1‑100 (MQ=255)
    gatgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCgg                                                                                                >  1:2048240‑M1/96‑100 (MQ=255)
     atgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGa                                                                                               <  2:747588‑M1/6‑1 (MQ=255)
      tgttcttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCgg                                                                                                <  2:152903‑M1/5‑1 (MQ=255)
      cAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGAt                                                                                              >  1:1902506/1‑100 (MQ=255)
      cAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGAt                                                                                              >  1:567857/1‑100 (MQ=255)
       aaCGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATg                                                                                             >  1:1903478/1‑100 (MQ=255)
          cttgatggggtgaaccagctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggacttcatggttcgtgcgacaggtagGCCGGa                                                                                               <  2:1623814‑M1/6‑1 (MQ=255)
           gTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgcggc                                                                                         <  2:1725761/100‑1 (MQ=255)
            tACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATgcggcg                                                                                        <  2:158616/100‑1 (MQ=255)
                cTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGaa                                                                                    >  2:934219/1‑100 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCCGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  >  2:1896655/1‑100 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  >  1:917319/1‑100 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  <  2:289405/100‑1 (MQ=255)
                  gACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATGTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACg                                                                                  >  2:1990946/1‑100 (MQ=255)
                    cgcgCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGcc                                                                                <  2:1502685/100‑1 (MQ=255)
                    cgcgCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGcc                                                                                <  1:1470658/100‑1 (MQ=255)
                    cgcgCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGcc                                                                                <  1:155163/100‑1 (MQ=255)
                      cgcACGCGTAAGAAATCATTCTGGTGGGATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCtt                                                                              <  2:73343/100‑1 (MQ=255)
                       gcACGCGTAAGAAATCATTCTGGTGATATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTa                                                                             <  2:845149/100‑1 (MQ=255)
                           gctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCg                                                                         >  1:1617284‑M1/73‑100 (MQ=255)
                            ctctgatgccaaatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        >  2:440542‑M1/72‑100 (MQ=255)
                            cgTAAGACATCCTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                        >  2:1087556/1‑100 (MQ=255)
                             gTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                       >  1:658386/1‑100 (MQ=255)
                             gTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                       <  1:724641/100‑1 (MQ=255)
                              tAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                      >  2:403174/1‑100 (MQ=255)
                               aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     <  1:516581/100‑1 (MQ=255)
                               aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     >  1:406880/1‑100 (MQ=255)
                               aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     <  2:189990/100‑1 (MQ=255)
                               aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     >  2:2044329/1‑100 (MQ=255)
                               aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                     <  2:94008/100‑1 (MQ=255)
                               aaGAAATCATGCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATAAGGCGTTCACGCCGCATCCGGca                                                                      <  1:146305/99‑2 (MQ=25)
                                aGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                    >  1:1823534/1‑100 (MQ=255)
                                 gcaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                   <  2:1260121/98‑1 (MQ=255)
                                  aaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                  <  1:1599902/100‑1 (MQ=255)
                                   aaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAt                                                                 >  2:805767/1‑100 (MQ=255)
                                   aaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAt                                                                 >  2:1626356/1‑100 (MQ=255)
                                     tCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                               >  1:1455253/1‑100 (MQ=255)
                                     tCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                               >  1:2058534/1‑100 (MQ=255)
                                      cATTCTAGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                               <  2:1238145/99‑1 (MQ=255)
                                       aatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg                                                             >  1:620213‑M1/61‑100 (MQ=255)
                                        ttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGc                                                            >  2:924985/1‑100 (MQ=255)
                                          cTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCAc                                                          <  2:499762/100‑1 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         <  2:151786/100‑1 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         <  2:263653/100‑1 (MQ=255)
                                           tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                         >  1:1495715/1‑100 (MQ=255)
                                            ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                        >  2:1661059/1‑100 (MQ=255)
                                            ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                        >  1:832456/1‑100 (MQ=255)
                                            ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                        >  1:1354446/1‑100 (MQ=255)
                                             gtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGaa                                                       >  1:1175972/1‑100 (MQ=255)
                                               ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                     <  1:1193334/100‑1 (MQ=255)
                                                 tataAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCAt                                                   >  2:718043/1‑100 (MQ=255)
                                                   taAAAAAGGGATGGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                 <  1:899459/100‑1 (MQ=255)
                                                   naaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                 >  1:226428/2‑100 (MQ=255)
                                                    aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                <  2:1903462/100‑1 (MQ=255)
                                                    aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                <  1:651107/100‑1 (MQ=255)
                                                    aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                <  1:1661071/100‑1 (MQ=255)
                                                         aGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGccc                                           <  2:1625400/100‑1 (MQ=255)
                                                         aGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTCGCACGAACCATGAAGGccc                                           >  2:2051735/1‑100 (MQ=255)
                                                          gTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                          <  1:1737003/100‑1 (MQ=255)
                                                          gTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                          <  1:1737101/100‑1 (MQ=255)
                                                          gTGATTGCCAGTAACGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                          <  2:1413495/100‑1 (MQ=255)
                                                            gATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGGCGCACGAACCATGAAGGCCCGAt                                        >  1:411203/1‑100 (MQ=255)
                                                             aTTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATa                                       >  1:1698378/1‑100 (MQ=255)
                                                              ttGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATaa                                      >  2:393990/1‑100 (MQ=255)
                                                                 ccAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGACTACATGTCGCACGAACCATGAAGGCCCGATAagcg                                   >  1:1455582/1‑100 (MQ=255)
                                                                  cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                  <  2:1078285/100‑1 (MQ=255)
                                                                  cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                  <  2:1961956/100‑1 (MQ=255)
                                                                     tAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagc                               <  1:976878/100‑1 (MQ=255)
                                                                      aaTGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagcn                              <  2:1637963/100‑2 (MQ=255)
                                                                         ggggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCAt                           >  2:1417398/1‑100 (MQ=255)
                                                                          gggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATc                          >  2:302826/1‑100 (MQ=255)
                                                                          gggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATc                          <  1:395478/100‑1 (MQ=255)
                                                                            gAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCgg                        <  1:557800/100‑1 (MQ=255)
                                                                              aGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGc                      <  2:1626147/100‑1 (MQ=255)
                                                                              aGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGc                      >  1:1531271/1‑100 (MQ=255)
                                                                                aTTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCaa                    >  2:768954/1‑100 (MQ=255)
                                                                                   tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                 <  1:1990010/100‑1 (MQ=255)
                                                                                   tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                 >  1:517455/1‑100 (MQ=255)
                                                                                   tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                 >  2:1107708/1‑100 (MQ=255)
                                                                                    agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGACAATTTa                >  1:150969/1‑100 (MQ=255)
                                                                                     gagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAg               >  1:1277762/1‑100 (MQ=255)
                                                                                     gagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAg               >  1:1279207/1‑100 (MQ=255)
                                                                                       gTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCa             >  1:1911173/1‑100 (MQ=255)
                                                                                         aGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAtt           >  1:1318206/1‑100 (MQ=255)
                                                                                          ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAGATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt          <  2:1455243/100‑1 (MQ=255)
                                                                                           gTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTg         <  2:1018772/100‑1 (MQ=255)
                                                                                               cAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCAt     >  1:844361/1‑100 (MQ=255)
                                                                                                 gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa   >  2:1602836/1‑100 (MQ=255)
                                                                                                 gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa   >  1:584747/1‑100 (MQ=255)
                                                                                                  tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCag  <  2:917316/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
CGCAGGCAACGGTACGCTGACGCGCACGCGTAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAG  >  NC_000913/2842324‑2842521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.