BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2842423 =	NA (NA)	3 (0.040)	3/164	NT	NA	noncoding (1/79 nt)	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2842453 =	NA (NA)	3 (0.040)	3/164	NT	NA	noncoding (31/79 nt)	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP197 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 109 total aligned reads displayed.

TAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTG  >  NC_000913/2842354‑2842551

tAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                                                    >  2:403174/1‑100 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   <  2:189990/100‑1 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   <  1:516581/100‑1 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   >  1:406880/1‑100 (MQ=255)

 aaGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCt                                                                                                   <  2:94008/100‑1 (MQ=255)

  aGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                  <  1:616228/100‑1 (MQ=255)

  aGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                  >  1:1823534/1‑100 (MQ=255)

   gcaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                 <  2:1260121/98‑1 (MQ=255)

    aaaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                                                                <  1:1599902/100‑1 (MQ=255)

     aaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAt                                                                                               >  2:1626356/1‑100 (MQ=255)

     aaTCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAt                                                                                               >  2:805767/1‑100 (MQ=255)

       tCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                                                             >  1:1455253/1‑100 (MQ=255)

       tCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                                                             >  1:2058534/1‑100 (MQ=255)

        naTTCTGGCGGTAAAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGAAGAGGCGTGAACGCCGTATCCAGCCTACATg                                                                                              >  2:977855/2‑98 (MQ=255)

        cATTCTAGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGt                                                                                             <  2:1238145/99‑1 (MQ=255)

         aatgctaaattgcccgatgcgctgcgcttatcgggccttcatggttcgtgcgacatgtagGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg                                                                                           >  1:620213‑M1/61‑100 (MQ=255)

         aTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCg                                                                                           >  1:1474554/1‑100 (MQ=255)

          ttCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGc                                                                                          >  2:924985/1‑100 (MQ=255)

            cTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCAc                                                                                        <  2:499762/100‑1 (MQ=255)

            cTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCAc                                                                                        <  1:221335/100‑1 (MQ=255)

             tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                                                       <  2:263653/100‑1 (MQ=255)

             tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                                                       <  2:151786/100‑1 (MQ=255)

             tggtggTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACg                                                                                       >  1:1495715/1‑100 (MQ=255)

              ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                                                      >  2:1661059/1‑100 (MQ=255)

              ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                                                      >  1:832456/1‑100 (MQ=255)

              ggtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGa                                                                                      >  1:1354446/1‑100 (MQ=255)

               gtggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGaa                                                                                     >  1:1175972/1‑100 (MQ=255)

                 ggtATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAAcc                                                                                   <  1:1193334/100‑1 (MQ=255)

                     naaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGa                                                                               >  1:226428/2‑100 (MQ=255)

                      aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                                              <  1:651107/100‑1 (MQ=255)

                      aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                                              <  2:1903462/100‑1 (MQ=255)

                      aaaaaaGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGaa                                                                              <  1:1661071/100‑1 (MQ=255)

                           aGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTCGCACGAACCATGAAGGccc                                                                         >  2:2051735/1‑100 (MQ=255)

                            gTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                                                        <  1:1737101/100‑1 (MQ=255)

                            gTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                                                        <  1:1737003/100‑1 (MQ=255)

                            gTGATTGCCAGTAACGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCg                                                                        <  2:1413495/100‑1 (MQ=255)

                               aTTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATa                                                                     >  1:1698378/1‑100 (MQ=255)

                               aTTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATa                                                                     >  1:1698868/1‑100 (MQ=255)

                                ttGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATaa                                                                    >  2:393990/1‑100 (MQ=255)

                                   ccAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGACTACATGTCGCACGAACCATGAAGGCCCGATAagcg                                                                 >  1:1455582/1‑100 (MQ=255)

                                    cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                                                <  2:1961956/100‑1 (MQ=255)

                                    cAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgc                                                                <  2:1078285/100‑1 (MQ=255)

                                       tAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagc                                                             <  1:976878/100‑1 (MQ=255)

                                        aaTGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAagcgcagcn                                                            <  2:1637963/100‑2 (MQ=255)

                                           ggggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCAt                                                         >  2:1417398/1‑100 (MQ=255)

                                            gggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATc                                                        >  2:302826/1‑100 (MQ=255)

                                            gggAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATc                                                        <  1:395478/100‑1 (MQ=255)

                                              gAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCgg                                                      <  1:557800/100‑1 (MQ=255)

                                                aGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGc                                                    >  1:1531271/1‑100 (MQ=255)

                                                aGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGc                                                    <  2:1626147/100‑1 (MQ=255)

                                                  aTTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCaa                                                  >  2:768954/1‑100 (MQ=255)

                                                  aTTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCaa                                                  >  1:978502/1‑100 (MQ=255)

                                                     tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                                               <  1:1990010/100‑1 (MQ=255)

                                                     tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                                               >  1:517455/1‑100 (MQ=255)

                                                     tAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAAttt                                               >  2:1107708/1‑100 (MQ=255)

                                                      agagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGACAATTTa                                              >  1:150969/1‑100 (MQ=255)

                                                       gagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAg                                             >  1:1279207/1‑100 (MQ=255)

                                                       gagTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAg                                             >  1:1277762/1‑100 (MQ=255)

                                                           cgacatgtaggccggataaggcgttcacgccgcatccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAtt                                         >  1:620213‑M2/41‑100 (MQ=255)

                                                           aGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAtt                                         >  1:1318206/1‑100 (MQ=255)

                                                            ggTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAGATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCAttt                                        <  2:1455243/100‑1 (MQ=255)

                                                             gTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTg                                       <  2:1018772/100‑1 (MQ=255)

                                                                 cAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCAt                                   >  1:844361/1‑100 (MQ=255)

                                                                   gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 >  1:584747/1‑100 (MQ=255)

                                                                   gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 >  2:1602836/1‑100 (MQ=255)

                                                                   gTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCa                                 >  2:200509/1‑100 (MQ=255)

                                                                    tGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCag                                <  2:917316/100‑1 (MQ=255)

                                                                      ccggataaggcgttcacgccgcatccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCagag                              >  2:440542‑M2/30‑100 (MQ=255)

                                                                       cggataaggcgttcacgccgcatccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGc                             >  1:1617284‑M2/29‑100 (MQ=255)

                                                                       CGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGc                             >  2:750104‑M1/1‑100 (MQ=255)

                                                                          ATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTgg                          >  2:1528018‑M1/1‑100 (MQ=255)

                                                                          ATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTgg                          >  2:1020660‑M1/1‑100 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTc                       <  2:832453/100‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTc                       >  2:1042452/1‑100 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTc                       <  2:1823887/100‑1 (MQ=255)

                                                                             cggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTc                       >  1:1675471/1‑100 (MQ=255)

                                                                              ggcgTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCa                      >  2:415888/1‑100 (MQ=255)

                                                                                 gTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCAccc                   <  1:1184524/100‑1 (MQ=255)

                                                                                  tGAACGCCTTATCGGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCAcccc                  >  2:1303228/1‑100 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCa                 <  2:1389731/100‑1 (MQ=255)

                                                                                   gAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCa                 >  2:532792/1‑100 (MQ=255)

                                                                                     aCGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATc               >  1:276809/1‑100 (MQ=255)

                                                                                       gCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCaa             <  2:567853/100‑1 (MQ=255)

                                                                                       gCCTTATCCGGACTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCaa             <  2:966717/100‑1 (MQ=255)

                                                                                        ccTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTCGCATTTGGCATCAGAGCTGGTTCACCCCATCAAg            >  2:912468/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAg            >  1:1911579/1‑100 (MQ=255)

                                                                                         cTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGa           <  1:934222/100‑1 (MQ=255)

                                                                                           tATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAAc         >  1:1555887/1‑100 (MQ=255)

                                                                                             tccggcCTACCTGTCGCACGAACCATGAAGTCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAg            <  2:1623814‑M2/89‑1 (MQ=255)

                                                                                             tccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACAt       <  2:623407‑M2/94‑1 (MQ=255)

                                                                                             tccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACAt       <  2:747588‑M2/94‑1 (MQ=255)

                                                                                              ccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACa        <  2:152903‑M2/93‑1 (MQ=255)

                                                                                              ccggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATc      >  1:2048240‑M2/6‑100 (MQ=255)

                                                                                               cggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATcc     >  1:690272‑M2/5‑100 (MQ=255)

                                                                                                ggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGTGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATccc    <  2:1455572‑M2/97‑1 (MQ=255)

                                                                                                ggcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATccc    <  1:403177‑M2/97‑1 (MQ=255)

                                                                                                 gcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATccc    <  2:1624521‑M2/97‑1 (MQ=255)

                                                                                                 gcCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCt   <  2:1902490‑M2/98‑1 (MQ=255)

                                                                                                  cCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTg  <  1:2035568‑M2/99‑1 (MQ=255)

                                                                                                  cCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTg  <  2:1823521‑M2/99‑1 (MQ=255)

TAAGAAATCATTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAGGTAACAGTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACATGTCGCACGAACCATGAAGGCCCGATAAGCGCAGCGCATCGGGCAATTTAGCATTTGGCATCAGAGCTGGTTCACCCCATCAAGAACATCCCTG  >  NC_000913/2842354‑2842551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.