New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3962704 =	NA (NA)	3 (0.040)	3/166	NT	NA	noncoding (5/36 nt)	REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP286 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913	3962736 =	NA (NA)					intergenic (+38/+9)	rep/gpp	DNA helicase and single‑stranded DNA‑dependent ATPase/guanosine pentaphosphatase/exopolyphosphatase

GCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAA  >  NC_000913/3962605‑3962803                                                                                                    |                                                                                                    gcgcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAgg                                                                                                     <  2:1257220/100‑1 (MQ=255) gcgcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAgg                                                                                                     >  1:151907/1‑100 (MQ=255)  ggctaacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGc                                                                                                    <  2:828953‑M1/2‑1 (MQ=255)  cgcAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGc                                                                                                    >  1:1780543/1‑100 (MQ=255)    cAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGcc                                                                                                   >  2:590955/1‑99 (MQ=255)    cAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCg                                                                                                  >  1:322968/1‑100 (MQ=255)     aaaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCgg                                                                                                 >  2:757676/1‑100 (MQ=255)     aaaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCgg                                                                                                 <  2:1519548/100‑1 (MQ=255)      aacccaacatccgctgggtaaagagattattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattactgagtatgtGCCGGa                                                                                                <  2:1727498‑M1/6‑1 (MQ=255)      aaGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCgg                                                                                                 <  2:779412/99‑1 (MQ=255)        gTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaa                                                                                              <  1:227248/100‑1 (MQ=255)        gTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGaaa                                                                                              >  2:955276/1‑100 (MQ=255)          ggTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAg                                                                                            <  1:2068512/100‑1 (MQ=255)          ggTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAg                                                                                            <  2:1158694/100‑1 (MQ=255)           gTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGa                                                                                           <  1:1378347/100‑1 (MQ=255)                cgcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGt                                                                                      >  1:52285/1‑100 (MQ=255)                 gcCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTc                                                                                     <  2:1897049/100‑1 (MQ=255)                  ccGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCa                                                                                    >  2:1946900/1‑100 (MQ=255)                   cGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAg                                                                                   <  1:726497/100‑1 (MQ=255)                       gaaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatc                                                                               >  2:2068731/1‑100 (MQ=255)                        aaCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcg                                                                              <  1:1392705/100‑1 (MQ=255)                         aCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgc                                                                             >  1:1201307/1‑100 (MQ=255)                         aCGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgc                                                                             >  1:505939/1‑100 (MQ=255)                            gATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAgcatcgcatc                                                                          >  1:45889/1‑100 (MQ=255)                             aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAGCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATcc                                                                         <  2:1804050/100‑1 (MQ=255)                             aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCTGCATCGCATcc                                                                         >  2:40910/1‑100 (MQ=255)                             aTGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATcc                                                                         >  1:995620/1‑100 (MQ=255)                              tGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCg                                                                        >  1:641557/1‑100 (MQ=255)                                ttattgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      >  2:1486999‑M1/69‑100 (MQ=255)                                ctgAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      <  1:526799/98‑1 (MQ=255)                                cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      >  2:1947463/1‑100 (MQ=255)                                cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      >  1:1789080/1‑100 (MQ=255)                                cAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGc                                                                      <  1:809343/100‑1 (MQ=255)                                 aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCa                                                                     >  2:1524622/1‑100 (MQ=255)                                 aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCa                                                                     >  2:672699/1‑100 (MQ=255)                                 aGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCa                                                                     >  1:2034907/1‑100 (MQ=255)                                  gAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCag                                                                    >  2:526795/1‑99 (MQ=255)                                  gAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCAc                                                                    >  2:354513/1‑100 (MQ=255)                                    tgctcaggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACtt                                                                  >  2:2007890‑M1/65‑100 (MQ=255)                                    aaGGGCAAAGCCATCTGGCGAATCGGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACtt                                                                  <  1:456758/100‑1 (MQ=255)                                      gggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                >  1:1426411/1‑100 (MQ=255)                                      gggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTAc                                                                >  1:1525780/1‑100 (MQ=255)                                       ggCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACt                                                               >  2:2024132/1‑100 (MQ=255)                                        gCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                              <  2:1863514/100‑1 (MQ=255)                                        gCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                              >  1:639639/1‑100 (MQ=255)                                        caggaaagccagtggcagagctatgtccactggccgctggaagtgcattaatgagtaagtGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTc                                                              >  1:1067851‑M1/61‑100 (MQ=255)                                          aaaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAt                                                            <  1:157433/100‑1 (MQ=255)                                           aaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                           <  1:911425/100‑1 (MQ=255)                                           aaGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCAtt                                                           >  2:606047/1‑100 (MQ=255)                                            aGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTa                                                          <  1:237926/100‑1 (MQ=255)                                             gCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTa                                                          >  2:2009740/1‑99 (MQ=255)                                              ccATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                        <  1:1524633/100‑1 (MQ=255)                                              ccATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAAt                                                        <  2:283319/100‑1 (MQ=255)                                               cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                       <  2:479714/100‑1 (MQ=255)                                               cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                       >  1:726873/1‑100 (MQ=255)                                               cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                       <  1:1379697/100‑1 (MQ=255)                                               cATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCCGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATg                                                       >  2:1328076/1‑100 (MQ=255)                                                aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                      <  1:1070134/100‑1 (MQ=255)                                                aTCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGc                                                      <  1:477177/100‑1 (MQ=255)                                                  cTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGccc                                                    >  2:1925561/1‑98 (MQ=255)                                                  cTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCAc                                                    >  2:20893/1‑100 (MQ=255)                                                   tGGCGAATCTGAAAGCGATGATGGCGGCAAAACGATGGAAATAATCACGACCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCa                                                     <  2:463217/98‑1 (MQ=255)                                                    ggCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACtt                                                  >  2:863442/1‑100 (MQ=255)                                                         aTCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGc                                             >  2:1725991/1‑100 (MQ=255)                                                          tCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCg                                            <  2:289606/100‑1 (MQ=255)                                                            tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                          >  1:64493/1‑100 (MQ=255)                                                            tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                          >  2:1524513/1‑100 (MQ=255)                                                            tGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGc                                          >  1:34225/1‑100 (MQ=255)                                                             gAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGcc                                         <  2:362070/100‑1 (MQ=255)                                                             gAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGcc                                         <  1:1699612/100‑1 (MQ=255)                                                                 gCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTg                                     >  1:407440/1‑100 (MQ=255)                                                                  cGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTgg                                    <  1:757679/100‑1 (MQ=255)                                                                    atgatgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGAc                                  <  1:866181/100‑1 (MQ=255)                                                                      gatgGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACAt                                >  1:1377153/1‑100 (MQ=255)                                                                               aaaaCGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGcc                       <  2:1816299/100‑1 (MQ=255)                                                                                   cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTg                   <  1:765830/100‑1 (MQ=255)                                                                                   cGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTg                   <  2:1328152/100‑1 (MQ=255)                                                                                    gAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTgg                  <  2:828955/100‑1 (MQ=255)                                                                                     aGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGc                 <  1:332983/100‑1 (MQ=255)                                                                                      gggAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCt                >  2:559192/1‑100 (MQ=255)                                                                                        gAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCttt              >  1:1737729/1‑100 (MQ=255)                                                                                        gAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCttt              >  2:839906/1‑100 (MQ=255)                                                                                          aataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTcc            <  1:1879010/100‑1 (MQ=255)                                                                                           ataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCt           <  1:2024148/100‑1 (MQ=255)                                                                                           ataatCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCt           <  1:1495543/100‑1 (MQ=255)                                                                                               tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:846560/100‑1 (MQ=255)                                                                                               tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:1201302/100‑1 (MQ=255)                                                                                               tCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:1921264/100‑1 (MQ=255)                                                                                                cAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCa      >  2:1996715/1‑100 (MQ=255)                                                                                                cAAGGCCCGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGc       <  2:155439/99‑1 (MQ=255)                                                                                                   ggCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaata   <  2:979775/100‑1 (MQ=255)                                                                                                    GCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCaataa  >  1:955279‑M1/1‑100 (MQ=255)                                                                                                    |                                                                                                    GCGCAAAGTGGTCAGCGCCGAAGAACGGATGCAGAAAGGGCAAAGCCATCTGGCGAATCTGAAAGCGATGATGGCGGCAAAACGAGGGAAATAATCAAGGCCGGAAAAGATGCGTCAGCATCGCATCCGGCACTTACTCATTAATGCACTTCCAGCGGCCAGTGGACATAGCTCTGCCACTGGCTTTCCTGAGCAATAA  >  NC_000913/3962605‑3962803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.