New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3708321NA (NA)5 (0.050) 4/164 NT NA noncoding (50/86 nt) REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 3708353 NA (NA)noncoding (82/86 nt) REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences REP267 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

AATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGC  >  NC_000913/3708222‑3708420
                                                                                                   |                                                                                                   
aaTGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACAttt                                                                                                     >  1:367486/1‑100 (MQ=255)
 aTGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTg                                                                                                    <  2:909334‑M1/100‑2 (MQ=255)
   ggATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcc                                                                                                  <  1:38571‑M1/100‑4 (MQ=255)
   ggATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcc                                                                                                  <  1:1185984‑M1/100‑4 (MQ=255)
   ggATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgc                                                                                                   >  1:749719‑M1/1‑97 (MQ=255)
     aTAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctg                                                                                                <  1:48359‑M1/100‑6 (MQ=255)
       aGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctgat                                                                                              <  2:1179503‑M1/100‑8 (MQ=255)
       aGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctgat                                                                                              <  1:221979‑M1/100‑8 (MQ=255)
       aGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGAATCCGACAATGGCCGGCACATTTgcctg                                                                                                >  2:1198399‑M1/1‑93 (MQ=255)
        gTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATg                                                                                             <  2:1792687/100‑1 (MQ=255)
         tGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGc                                                                                            >  2:2078458/1‑100 (MQ=255)
           agaTATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGAGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGa                                                                                          >  2:668818/1‑100 (MQ=255)
            gaTATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGAc                                                                                         <  1:1015028/100‑1 (MQ=255)
              tatGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGc                                                                                       <  2:2068705/100‑1 (MQ=255)
               atGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCt                                                                                      <  1:1137375/100‑1 (MQ=255)
                tGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgccagatcggaagagc                                                                                     >  2:2392027‑M1/1‑84 (MQ=255)
                tGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTg                                                                                     >  2:558281/1‑100 (MQ=255)
                 ggggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGa                                                                                    >  1:1651415/1‑100 (MQ=255)
                  gggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAc                                                                                   >  2:470005/1‑100 (MQ=255)
                   ggCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGAcg                                                                                  >  2:213874/1‑100 (MQ=255)
                        aaaTTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTc                                                                              <  2:249100/99‑1 (MQ=255)
                        aaaTTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGAGACGCTGACGCGtat                                                                             >  1:1188718/1‑98 (MQ=255)
                          aTTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTA                                                                           <  2:1608648‑M2/100‑1 (MQ=255)
                            ttGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATC                                                                         >  1:2168094‑M2/1‑100 (MQ=255)
                            ttGGCAGGGAAATGTGTGTCGTGTAGATCTCGTTGGTCGGCGGAGCATCAACCGACAAAGGCCGGCACATTTGCCTGATACGACGCTGACAAGTCTTATc                                                                         >  2:43503/1‑100 (MQ=255)
                             tGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCA                                                                        >  1:2528228‑M2/1‑100 (MQ=255)
                               ggagagAAATGTGTGCAGTGTAGTTCGAATAAATCGGTTGCGCCGCATCTTACAATGGCCGGCACATTTTCCTGATGTGATTTTTACGCGTCTTAtg                                                                         <  2:2319786/92‑2 (MQ=255)
                               gCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctgataagacgcgtcagcgtcgcatcagg                                                                      <  1:1526926‑M1/100‑32 (MQ=255)
                               gCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  2:2659907‑M2/1‑100 (MQ=255)
                               gCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  1:975446‑M2/1‑100 (MQ=255)
                               gCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGG                                                                      >  1:1052621‑M2/1‑100 (MQ=255)
                                cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctgataagacgcgtcagcgtcgcatcaggc                                                                     <  1:2157615‑M1/100‑33 (MQ=255)
                                cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     <  1:2121962‑M2/100‑1 (MQ=255)
                                cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     <  2:2685134‑M2/100‑1 (MQ=255)
                                cAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGC                                                                     >  1:1264167‑M2/1‑100 (MQ=255)
                                 aGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGcc                                                                    <  2:2083231/100‑1 (MQ=255)
                                  gggAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCt                                                                   <  2:2573068/100‑1 (MQ=255)
                                  gggAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCt                                                                   <  1:1004255/100‑1 (MQ=255)
                                   ggAAATGTGTTTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTgcctgataagacgcgtcagcgtcgcatcaggcaaa                                                                  <  1:507560‑M1/100‑36 (MQ=255)
                                    gAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAc                                                                 >  2:1290614/1‑100 (MQ=255)
                                    gAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTAc                                                                 >  1:1685014/1‑100 (MQ=255)
                                        tgtgtgTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcg                                                             <  2:2352266/100‑1 (MQ=255)
                                          tgtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgag                                                           <  1:2258538/100‑1 (MQ=255)
                                           gtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagt                                                          <  1:1745288/100‑1 (MQ=255)
                                           gtgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagt                                                          <  1:1319838/100‑1 (MQ=255)
                                            tgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtc                                                         <  2:783833/100‑1 (MQ=255)
                                            tgtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtc                                                         >  1:633416/1‑100 (MQ=255)
                                             gtCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACgtcgagtcg                                                        <  2:239693/100‑1 (MQ=255)
                                               cGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGaa                                                      <  1:1803772/100‑1 (MQ=255)
                                                gtgtAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTTACGCGTCTTATCAGGCCTACGTCGAGTCGAAc                                                     <  1:2610331/100‑1 (MQ=255)
                                                 tgtAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAAcc                                                    <  1:147331/100‑1 (MQ=255)
                                                   tAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTc                                                  <  1:2322288/100‑1 (MQ=255)
                                                    aGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTcc                                                 >  1:2506152/1‑100 (MQ=255)
                                                     ggTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTccc                                                >  2:2722650/1‑100 (MQ=255)
                                                     ggTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTccc                                                >  1:2341389/1‑100 (MQ=255)
                                                     ggTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTccc                                                >  1:2610413/1‑100 (MQ=255)
                                                     ggTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTccc                                                >  2:700748/1‑100 (MQ=255)
                                                      gTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCt                                               <  2:1105036/100‑1 (MQ=255)
                                                      gTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCt                                               >  1:2109761/1‑100 (MQ=255)
                                                      gTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATGTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCt                                               <  1:1259617/100‑1 (MQ=255)
                                                        cGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGc                                             >  2:645959/1‑100 (MQ=255)
                                                           aTAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGcccc                                          >  1:1317995/1‑100 (MQ=255)
                                                           aTAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGcccc                                          >  1:1808301/1‑100 (MQ=255)
                                                             aaGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCg                                        >  2:2260997/1‑100 (MQ=255)
                                                               ggCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGa                                      <  1:2019079/100‑1 (MQ=255)
                                                               ggCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGa                                      <  1:178819/100‑1 (MQ=255)
                                                               ggCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGa                                      >  2:91617/1‑100 (MQ=255)
                                                               ggCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGa                                      <  1:460959/100‑1 (MQ=255)
                                                               ggCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGa                                      <  1:2533378/100‑1 (MQ=255)
                                                                gCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAg                                     <  1:2430700/100‑1 (MQ=255)
                                                                 cGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAgg                                    >  2:715755/1‑100 (MQ=255)
                                                                  ggTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGt                                   <  1:513962/100‑1 (MQ=255)
                                                                  ggTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGt                                   <  2:1937857/100‑1 (MQ=255)
                                                                  ggTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGt                                   >  2:1677576/1‑100 (MQ=255)
                                                                  ggTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGt                                   <  1:1539946/100‑1 (MQ=255)
                                                                   gTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGtt                                  >  2:1425367/1‑100 (MQ=255)
                                                                   gTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGtt                                  >  2:854725/1‑100 (MQ=255)
                                                                     cgcgCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTtct                                <  1:1290619/100‑1 (MQ=255)
                                                                       cgccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCa                              <  1:2099665/100‑1 (MQ=255)
                                                                        gccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAt                             <  1:2517158/100‑1 (MQ=255)
                                                                        gccgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCAt                             <  2:2582593/100‑1 (MQ=255)
                                                                          cgcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATcc                           <  1:511419/100‑1 (MQ=255)
                                                                           gcATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCt                          <  1:933338/100‑1 (MQ=255)
                                                                             aTCCGACACTGGCCGGCACATCTGCCTGGTGGGACGCTGACGCGTCTTATCAGGCTTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATc                            <  2:1340616/96‑1 (MQ=37)
                                                                             aTCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTc                         <  1:558282/99‑1 (MQ=255)
                                                                             aTCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCa                        <  2:332269/100‑1 (MQ=255)
                                                                              tCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCAt                       <  1:2017409/100‑1 (MQ=255)
                                                                               ccGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATg                      <  2:630276/100‑1 (MQ=255)
                                                                                  aCAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGc                   <  2:2655890/100‑1 (MQ=255)
                                                                                   cAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCt                  >  1:1097046/1‑100 (MQ=255)
                                                                                   cAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCt                  >  1:668094/1‑100 (MQ=255)
                                                                                     aTGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCCGAGGTTCTACTCCTCATGAGCTGc                >  2:1922911/1‑100 (MQ=255)
                                                                                      tGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCa               <  1:715757/100‑1 (MQ=255)
                                                                                           ggctcgcttGCCTGGCGCGTCGCGGCCGCGTGTTATCAGGCCTCCGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCa               <  2:516411/88‑1 (MQ=17)
                                                                                           ggCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATg           <  2:1804768/99‑1 (MQ=255)
                                                                                            gCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCa         <  1:1553542/100‑1 (MQ=255)
                                                                                            gCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCa         >  2:180868/1‑100 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCaaatgtgccggccattgtcggatgcggcgcgaccgccttattcgacctacacgacacacatttccct  <  1:1688853‑M2/100‑68 (MQ=255)
                                                                                                   tGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAg   <  2:1389716/99‑1 (MQ=255)
                                                                                                   tGCCTGACGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGc  >  1:1439370/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AATGGATAGTGAGATATGGGGCGCAAATTTGGCAGGGAAATGTGTGTCGTGTAGGTCGAATAAGGCGGTCGCGCCGCATCCGACAATGGCCGGCACATTTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACGTCGAGTCGAACCTCCCTGCCCCCGGAGGTTCTCATCCTCATGAGCTGCAGATGCAAAAAAGC  >  NC_000913/3708222‑3708420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.