New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 462183886 (0.860)5 (0.060) 4/162 NT 5.5% coding (70/1332 nt) yjjJ putative protein kinase
?NC_000913 = 4621865 95 (1.050)coding (97/1332 nt) yjjJ putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 137 total aligned reads displayed.

TCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATC  >  NC_000913/4621739‑4621937
                                                                                                   |                                                                                                   
tCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAA                                                                                                     <  1:2256531‑M1/100‑1 (MQ=255)
 cAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAt                                                                                                    >  2:2048617/1‑100 (MQ=255)
 cAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAt                                                                                                    >  1:166726/1‑100 (MQ=255)
  aaGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtc                                                                                                   <  2:800330/100‑1 (MQ=255)
  aaGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtc                                                                                                   >  1:94083/1‑100 (MQ=255)
     tATCTATTCACGAATCTATTGATTGATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGGAAtcag                                                                                                 >  2:1244014/1‑99 (MQ=255)
      aTCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtcagtc                                                                                               <  2:15278/100‑1 (MQ=255)
      aTCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtcagtc                                                                                               <  1:1542196/100‑1 (MQ=255)
       tCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAtcagtca                                                                                              <  1:223325/100‑1 (MQ=255)
          aTTCACGAATCTAGTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGc                                                                                           >  1:1850809/1‑100 (MQ=255)
           ttCACGAGTCTATTCATTAATTGGCGAGCTGATTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCg                                                                                          <  2:752511/100‑1 (MQ=255)
           ttCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCg                                                                                          <  2:571183/100‑1 (MQ=255)
             cACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGAc                                                                                        >  1:1628826/1‑100 (MQ=255)
              aCGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACg                                                                                       <  1:788193/100‑1 (MQ=255)
               cGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGt                                                                                      >  2:1531466/1‑100 (MQ=255)
                 aaTCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTtc                                                                                    >  2:456283/1‑100 (MQ=255)
                 aaTCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTtc                                                                                    <  1:1399144/100‑1 (MQ=255)
                   tCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTtctc                                                                                  <  1:150299/100‑1 (MQ=255)
                     tATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCAc                                                                                <  1:2301779/100‑1 (MQ=255)
                        tCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGcc                                                                             <  2:408358/100‑1 (MQ=255)
                         cATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCt                                                                            >  1:1493989/1‑100 (MQ=255)
                            tAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCCGGTAATCAGTCAGGCGACGTTCTCACGCCTTGt                                                                         >  2:1808807‑M2/1‑99 (MQ=255)
                             aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                        <  1:2000932‑M2/100‑3 (MQ=255)
                             aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                        <  2:634437‑M2/100‑3 (MQ=255)
                             aaTGAGCGAGCCGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                        <  1:626307‑M2/100‑3 (MQ=255)
                                gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcc                                                                     >  2:56830‑M2/1‑95 (MQ=255)
                                gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcc                                                                     >  1:858850‑M2/1‑95 (MQ=255)
                                gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcc                                                                     <  2:355692‑M2/100‑6 (MQ=255)
                                 agcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcca                                                                    <  2:1412969‑M2/100‑7 (MQ=255)
                                  gcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccag                                                                   >  2:1341826‑M2/1‑93 (MQ=255)
                                  gcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccag                                                                   >  1:1731230‑M2/1‑93 (MQ=255)
                                   cgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAcaaggcgtgagaacgtcgcctgactgattgccaga                                                                  <  1:688661‑M1/100‑36 (MQ=255)
                                   cgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccaga                                                                  >  1:578190‑M2/1‑92 (MQ=255)
                                    gagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagac                                                                 <  1:1334997‑M1/100‑37 (MQ=255)
                                      gcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagacgc                                                               <  1:528209‑M1/100‑39 (MQ=255)
                                       ctgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGagaag                                                              <  1:2053291/100‑1 (MQ=255)
                                       ctgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGagaag                                                              <  2:1825076/100‑1 (MQ=255)
                                        tgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctg                                                             <  2:275487‑M1/100‑41 (MQ=255)
                                        tgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGagaaga                                                             <  1:1115928/100‑1 (MQ=255)
                                         gactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGAt                                                            >  2:2256608/1‑100 (MQ=255)
                                           ctgaTCTTTTCCTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCTCGCCTTGTTGCCAGAGAAGATCg                                                          <  2:840719/100‑1 (MQ=255)
                                            tgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCgg                                                         >  1:1977649/1‑100 (MQ=255)
                                              aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                       >  1:890840/1‑100 (MQ=255)
                                              aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                       <  1:630632/100‑1 (MQ=255)
                                              aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGGCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                       <  1:1349702/100‑1 (MQ=255)
                                               tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                                      <  2:890837/100‑1 (MQ=255)
                                                 ttttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCCGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                       >  2:2007343/1‑97 (MQ=255)
                                                  tttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGAtt                                                   >  2:1215929/1‑100 (MQ=255)
                                                      cTGCAGGGGCCGCGATCTGCCCCGGAATTGCCCCAGCGCCTGGCAATCAGTCTGGTGACTTTCTCAAGCCATGTTGCCAGAGAAGATCGGGTGAtt                                                   >  2:1816702/1‑96 (MQ=255)
                                                        gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                             <  2:2273641/100‑1 (MQ=255)
                                                         cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                            >  2:2692088/1‑100 (MQ=255)
                                                          aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTgg                                           >  2:1618802/1‑100 (MQ=255)
                                                          aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGACAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTgg                                           <  2:2322287/100‑1 (MQ=255)
                                                               ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                      <  2:1306164/100‑1 (MQ=255)
                                                               ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGACAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                      <  2:780235/100‑1 (MQ=255)
                                                                cgcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGc                                     <  1:2692106/100‑1 (MQ=255)
                                                                    ttCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACgg                                 <  2:1337333/100‑1 (MQ=255)
                                                                      cTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGc                               <  2:1181794/100‑1 (MQ=255)
                                                                      cTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGc                               <  2:7864/100‑1 (MQ=255)
                                                                         ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAc                            <  1:316369/100‑1 (MQ=255)
                                                                         ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGCGTGATTCCCTTTGGTAAAGCACGGGTAAc                            >  2:749746/1‑100 (MQ=255)
                                                                              gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                       <  1:488636/100‑1 (MQ=255)
                                                                              gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                       >  1:1827449/1‑100 (MQ=255)
                                                                              gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                       <  2:143625/100‑1 (MQ=255)
                                                                                   gcgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCa                  <  1:1540577/100‑1 (MQ=255)
                                                                                    cgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAc                 >  1:2609371/1‑100 (MQ=255)
                                                                                     gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct                >  1:1306527/1‑100 (MQ=255)
                                                                                     gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCCTTGGTAAAGCACGGGCAACGCGATATGCAct                >  1:2150865/1‑100 (MQ=255)
                                                                                      ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAgtg               >  1:2487099/1‑100 (MQ=255)
                                                                                      ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg               <  1:1419767/100‑1 (MQ=255)
                                                                                      ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg               >  1:5418/1‑100 (MQ=255)
                                                                                      ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg               <  2:372180/100‑1 (MQ=255)
                                                                                        aGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgct             >  1:820939/1‑100 (MQ=255)
                                                                                         gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagc            <  1:527974‑M2/100‑63 (MQ=255)
                                                                                          cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgctg            <  1:2415849/99‑1 (MQ=255)
                                                                                           gTCTGGCAATCAGTCATGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGTGTAACGCGATATGCACTGCTGCg          <  2:679153/100‑1 (MQ=255)
                                                                                           gTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctc          <  1:1334997‑M2/100‑65 (MQ=255)
                                                                                            tCTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcg         >  1:578190‑M1/1‑8 (MQ=255)
                                                                                            tCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcg         <  1:688661‑M2/100‑66 (MQ=255)
                                                                                             gtGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGCTTCGCTCTGGCAAAGCACGGGCAACGCGGTACGCACTGCTGCg          >  2:2705638/2‑98 (MQ=255)
                                                                                             cTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgc        >  2:1341826‑M1/1‑7 (MQ=255)
                                                                                             cTGGCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgc        >  1:1731230‑M1/1‑7 (MQ=255)
                                                                                             cTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTc        <  1:1984216/100‑1 (MQ=255)
                                                                                              tGGCAATCAGTCAGGCGAGGTTCTCACGCCTTGTTGACAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTc        <  2:1043237/99‑1 (MQ=255)
                                                                                              tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc       <  1:1412975/100‑1 (MQ=255)
                                                                                              tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc       <  2:1252879/100‑1 (MQ=255)
                                                                                              tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc       <  1:1951702/100‑1 (MQ=255)
                                                                                              tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTAGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc       <  1:1216602/100‑1 (MQ=255)
                                                                                               ggCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctc      >  2:56830‑M1/1‑5 (MQ=255)
                                                                                               ggCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctc      <  2:355692‑M1/100‑96 (MQ=255)
                                                                                               ggCAAcaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctc      >  1:858850‑M1/1‑5 (MQ=255)
                                                                                               ggCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCt      >  1:2111952/1‑100 (MQ=255)
                                                                                                gCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCCCTGCTGCGTCCtt     >  1:752396/1‑100 (MQ=255)
                                                                                                 cAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTa    >  2:2486553/1‑100 (MQ=255)
                                                                                                  aacaaggcgtgagaacgtcgcctgactgattgcccgactctggcgcaattccggtgcagaactcggcccttgcagtaaaagatccgtcagctccctcatt   <  2:2533071‑M1/100‑99 (MQ=255)
                                                                                                  aacaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcggctcgctcatt   <  1:626307‑M1/100‑99 (MQ=255)
                                                                                                  aacaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctcatt   <  2:769311‑M1/100‑99 (MQ=255)
                                                                                                   acaaggcgtgagaacgtcgcctgactgattgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctcatta  >  1:2070588‑M1/1‑1 (MQ=255)
                                                                                                   acaaggcgtgagaacgtcgcctgactgattaccggacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagctcgctcatta  >  2:1808807‑M1/1‑1 (MQ=255)
                                                                                                   aTCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATc  >  2:1114950/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TCAAGTATCTATTCACGAATCTATTCATTAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATC  >  NC_000913/4621739‑4621937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.