BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4621838	86 (0.860)	5 (0.060)	4/162	NT	5.5%	coding (70/1332 nt)	yjjJ	putative protein kinase
*	?	NC_000913	= 4621865	95 (1.050)	5 (0.060)	4/162	NT	5.5%	coding (97/1332 nt)	yjjJ	putative protein kinase
Rejected: Frequency below cutoff threshold.

Only 100 of 127 total aligned reads displayed.

TAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGC  >  NC_000913/4621767‑4621964

tAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGt                                                                                                    >  1:2070588‑M2/1‑99 (MQ=255)

tAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCCGGTAATCAGTCAGGCGACGTTCTCACGCCTTGt                                                                                                    >  2:1808807‑M2/1‑99 (MQ=255)

 aaTGAGGGAGCTGACGGATCTTTTACTGCAAGGGCCGAGTTCTGCACCGGAATTGCGCCAGAGTCGGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                                                   <  2:2533071‑M2/100‑3 (MQ=255)

 aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                                                   <  1:2000932‑M2/100‑3 (MQ=255)

 aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                                                   <  2:769311‑M2/100‑3 (MQ=255)

 aaTGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                                                   <  2:634437‑M2/100‑3 (MQ=255)

 aaTGAGCGAGCCGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGtt                                                                                                   <  1:626307‑M2/100‑3 (MQ=255)

    gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcc                                                                                                >  2:56830‑M2/1‑95 (MQ=255)

    gagcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcc                                                                                                >  1:858850‑M2/1‑95 (MQ=255)

     agcgagcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgcca                                                                                               <  2:1412969‑M2/100‑7 (MQ=255)

         agcTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAgaga                                                                                           <  1:2337525/100‑1 (MQ=255)

           ctgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGagaag                                                                                         <  1:2053291/100‑1 (MQ=255)

            tgactgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGagaaga                                                                                        <  1:1115928/100‑1 (MQ=255)

              actgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATc                                                                                      <  1:1509830/100‑1 (MQ=255)

               ctgaTCTTTTCCTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCTCGCCTTGTTGCCAGAGAAGATCg                                                                                     <  2:840719/100‑1 (MQ=255)

                tgaTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCgg                                                                                    >  1:1977649/1‑100 (MQ=255)

                  aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                                                  <  1:730429/100‑1 (MQ=255)

                  aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                                                  <  1:630632/100‑1 (MQ=255)

                  aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                                                  >  1:890840/1‑100 (MQ=255)

                  aTCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGGCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                                                  <  1:1349702/100‑1 (MQ=255)

                   tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                                                                 <  2:890837/100‑1 (MQ=255)

                   tCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTg                                                                                 <  1:1657965/100‑1 (MQ=255)

                     ttttACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCCGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGt                                                                                  >  2:2007343/1‑97 (MQ=255)

                          cTGCAGGGGCCGCGATCTGCCCCGGAATTGCCCCAGCGCCTGGCAATCAGTCTGGTGACTTTCTCAAGCCATGTTGCCAGAGAAGATCGGGTGAtt                                                                              >  2:1816702/1‑96 (MQ=255)

                           tGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCtt                                                                         >  1:2243364/1‑100 (MQ=255)

                            gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGATGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                                                        <  1:1369215/100‑1 (MQ=255)

                            gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                                                        <  2:2273641/100‑1 (MQ=255)

                            gCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCttt                                                                        <  1:1771890/100‑1 (MQ=255)

                             cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                                                       <  2:1823951/100‑1 (MQ=255)

                             cAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTg                                                                       >  2:2692088/1‑100 (MQ=255)

                              aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTgg                                                                      >  2:1618802/1‑100 (MQ=255)

                              aaGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGACAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTgg                                                                      <  2:2322287/100‑1 (MQ=255)

                                gggCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTa                                                                    >  1:82115/1‑100 (MQ=255)

                                   ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                                                 <  2:1306164/100‑1 (MQ=255)

                                   ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGACAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                                                 <  2:2038741/100‑1 (MQ=255)

                                   ccGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGACAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAg                                                                 <  2:780235/100‑1 (MQ=255)

                                    cgcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGc                                                                <  2:2305915/100‑1 (MQ=255)

                                    cgcgTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGc                                                                <  1:2692106/100‑1 (MQ=255)

                                        ttCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACgg                                                            <  2:1337333/100‑1 (MQ=255)

                                          cTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCTGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGc                                                          <  2:1468967/100‑1 (MQ=255)

                                          cTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGc                                                          <  2:7864/100‑1 (MQ=255)

                                          cTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGc                                                          <  2:1181794/100‑1 (MQ=255)

                                             ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAAc                                                       <  1:316369/100‑1 (MQ=255)

                                             ccccGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGCGTGATTCCCTTTGGTAAAGCACGGGTAAc                                                       >  2:749746/1‑100 (MQ=255)

                                                  gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                                                  <  1:488636/100‑1 (MQ=255)

                                                  gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                                                  <  2:143625/100‑1 (MQ=255)

                                                  gAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGat                                                  >  1:1827449/1‑100 (MQ=255)

                                                   aaTTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGata                                                 <  1:634439/100‑1 (MQ=255)

                                                        cgcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAc                                            >  1:2609371/1‑100 (MQ=255)

                                                         gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct                                           >  1:1306527/1‑100 (MQ=255)

                                                         gcCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAct                                           >  1:186291/1‑100 (MQ=255)

                                                          ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCAgtg                                          >  1:2487099/1‑100 (MQ=255)

                                                          ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg                                          <  2:372180/100‑1 (MQ=255)

                                                          ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActg                                          >  1:5418/1‑100 (MQ=255)

                                                          ccAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTGGCCAGAGAAGACCGGGTGATTCGCTTTGGTCCAGCACGGGCAACGCGATATGCAc                                            <  2:363037/98‑1 (MQ=255)

                                                           cAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtca                                         <  2:275487‑M2/100‑61 (MQ=255)

                                                            aGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgct                                        >  1:820939/1‑100 (MQ=255)

                                                             gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagc                                       <  1:528209‑M2/100‑63 (MQ=255)

                                                             gCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGttgccagacgctggcgcaattccggggcagaacgcggcccttgcagtaaaagatcagtcagc                                       <  1:527974‑M2/100‑63 (MQ=255)

                                                              cGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCActgctg                                       <  1:2415849/99‑1 (MQ=255)

                                                               gTCTGGCAATCAGTCATGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGTGTAACGCGATATGCACTGCTGCg                                     <  2:679153/100‑1 (MQ=255)

                                                               gTCTGGCAATCAGGCAGGCGACGTTCTCACGCCTGGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCg                                     <  2:1241246/100‑1 (MQ=255)

                                                                 gtGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGCTTCGCTCTGGCAAAGCACGGGCAACGCGGTACGCACTGCTGCg                                     >  2:2705638/2‑98 (MQ=255)

                                                                 cTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTc                                   <  1:1984216/100‑1 (MQ=255)

                                                                  tGGCCATCAGTCAGGCGACTTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  2:1122037/100‑1 (MQ=255)

                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  2:1252879/100‑1 (MQ=255)

                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:1412975/100‑1 (MQ=255)

                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  >  2:808093/1‑100 (MQ=255)

                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:1951702/100‑1 (MQ=255)

                                                                  tGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTAGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTcc                                  <  1:1216602/100‑1 (MQ=255)

                                                                   ggCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCt                                 >  1:2111952/1‑100 (MQ=255)

                                                                   ggCAATCAGTCAGGCGACGTACTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCt                                 >  2:1676112/1‑100 (MQ=255)

                                                                    gCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCCCTGCTGCGTCCtt                                >  1:752396/1‑100 (MQ=255)

                                                                     cAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTa                               >  2:2486553/1‑100 (MQ=255)

                                                                     cAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTa                               >  1:1481139/1‑100 (MQ=255)

                                                                     cAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTa                               >  1:620459/1‑100 (MQ=255)

                                                                       aTCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATc                             >  2:1114950/1‑100 (MQ=255)

                                                                          agtcagGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATcgcg                          <  2:166726/100‑1 (MQ=255)

                                                                            gtagGCTACGTCCTCACGTCTTGTTGCCAGAGAAGATGGGGTGATTCGCTTTGTTAAAGCACGGGCAACGCGATATGCACTGCTGGGTCCTTATcgcg                          <  2:2601821/96‑1 (MQ=255)

                                                                             cagGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGaa                       >  2:357852/1‑100 (MQ=255)

                                                                              agGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAt                      >  1:1688221/1‑100 (MQ=255)

                                                                               ggCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAAtt                     >  1:96909/1‑100 (MQ=255)

                                                                                  ttccgatctaCGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg                  <  2:2033224/91‑1 (MQ=255)

                                                                                  gACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg                  <  2:1782040/100‑1 (MQ=255)

                                                                                  gACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAg                  <  2:1080192/100‑1 (MQ=255)

                                                                                    cGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCg                >  1:2725468/1‑100 (MQ=255)

                                                                                     gTTCTCACGCCTTGTTGCCCGAGAAGATCGGGTGATTCGCCTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGt               >  1:1397170/1‑100 (MQ=255)

                                                                                     gTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGt               <  2:519770/100‑1 (MQ=255)

                                                                                       tctcACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTAt             >  1:1503002/1‑100 (MQ=255)

                                                                                          cACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTcc          >  2:2032190/1‑100 (MQ=255)

                                                                                          cACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTcc          <  2:2672299/100‑1 (MQ=255)

                                                                                           aCGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAgagatcggaa         >  1:2033236/1‑91 (MQ=255)

                                                                                           aCGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTccc         >  2:1430988/1‑100 (MQ=255)

                                                                                           aCGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTccc         <  1:144286/100‑1 (MQ=255)

                                                                                                ttgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTg    <  1:1707283/100‑1 (MQ=255)

                                                                                                 tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTgg   <  1:2444296/100‑1 (MQ=255)

                                                                                                 tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTgg   >  1:2323054/1‑100 (MQ=255)

                                                                                                 tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTgg   >  1:2192789/1‑100 (MQ=255)

                                                                                                 tgttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTg    <  2:2650175/99‑1 (MQ=255)

                                                                                                  gttgCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGc  <  1:1217497/100‑1 (MQ=255)

TAATGAGCGAGCTGACTGATCTTTTACTGCAAGGGCCGCGTTCTGCCCCGGAATTGCGCCAGCGTCTGGCAATCAGTCAGGCGACGTTCTCACGCCTTGTTGCCAGAGAAGATCGGGTGATTCGCTTTGGTAAAGCACGGGCAACGCGATATGCACTGCTGCGTCCTTATCGCGGAATTGAGCGTATTCCCGTCTGGC  >  NC_000913/4621767‑4621964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.