New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4626299 =112 (1.120)3 (0.030) 3/168 NT 2.9% coding (388/1383 nt) radA DNA repair protein
?NC_000913 4626342 = 96 (1.020)coding (431/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 135 total aligned reads displayed.

GCCATTCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCT  >  NC_000913/4626200‑4626398
                                                                                                   |                                                                                                   
gCCATTCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCg                                                                                                     >  2:229995/1‑100 (MQ=255)
caattaccatcagcttcggttgctcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaag                                                                                                     <  2:2484803‑M1/1‑1 (MQ=255)
caattaccatcagcttcggttgctcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaag                                                                                                     <  1:385723‑M1/1‑1 (MQ=255)
caattaccatcagcttcggttgctcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaag                                                                                                     <  1:185422‑M1/1‑1 (MQ=255)
 aattaccatcagcttcggttgctcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaagg                                                                                                    >  2:1457673‑M1/99‑100 (MQ=255)
  attaccatcagcttcggttgttcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaaGGc                                                                                                   >  1:2619187‑M1/98‑100 (MQ=255)
  attaccatcagcttcggttgctcttcttcggcaatcaggcagatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaaGGc                                                                                                   >  2:347958‑M1/98‑100 (MQ=255)
     tCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGaa                                                                                                <  2:1050975/100‑1 (MQ=255)
       tGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAaga                                                                                              <  1:956965/100‑1 (MQ=255)
       tGAATGGCGGTAACCCTGATGCGGGGAAATCAACGCTGCTACTGCAAACGCTGTGCAAACTGGGCCAGCCGATGAAAACGCTGTATGTCAACGGCGCaga                                                                                              >  2:2737207/1‑100 (MQ=255)
        gATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAagag                                                                                             <  1:1031664/100‑1 (MQ=255)
        gATTGGCGGTAACAATGGTGCGGGGAAATCCACGCTGCTACTGCAAAAGATGTGGGAACAGGCCTAGCAGAGGAAGACGCTGTGTGTCACCggaggagcg                                                                                             >  2:1609319/1‑93 (MQ=255)
         aTTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCCCCGGCGAAGAGt                                                                                            >  1:1181540/1‑100 (MQ=255)
              cGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTg                                                                                       <  1:546775/100‑1 (MQ=255)
               ggTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGc                                                                                      <  1:905596/100‑1 (MQ=255)
               ggTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGc                                                                                      <  1:349992/100‑1 (MQ=255)
               ggTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGc                                                                                      <  2:1074506/100‑1 (MQ=255)
               ggTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGc                                                                                      <  2:2487620/100‑1 (MQ=255)
                 tAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCaa                                                                                    >  1:2582238/1‑100 (MQ=255)
                 tAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCa                                                                                     <  2:1042163/99‑1 (MQ=255)
                  aaCCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAAc                                                                                   <  2:2540436/100‑1 (MQ=255)
                  aaCCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAAc                                                                                   <  1:506948/100‑1 (MQ=255)
                   aCCCTGGTGCGGGGAAATTCACGCTGCTACGGCAAACGCTGTGCAAACTTGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGGGTAGCTGCAACa                                                                                  >  2:315249/1‑100 (MQ=255)
                   aCCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACa                                                                                  >  2:2208971/1‑100 (MQ=255)
                      cTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGt                                                                               <  1:2179625/100‑1 (MQ=255)
                         gTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGc                                                                            <  2:1252202/100‑1 (MQ=255)
                         gTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGc                                                                            <  1:1576537/100‑1 (MQ=255)
                         gTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGc                                                                            <  2:2517382/100‑1 (MQ=255)
                             ggggAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATg                                                                        >  1:444325/1‑100 (MQ=255)
                              gggAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATgc                                                                       >  1:2455937/1‑100 (MQ=255)
                                gAAATCCACGCTGCTACTGCAAACGCTGTGAAAAATGGCCCAGCAGAAGAAACCGCGGTATGGTACAGGCGAAGAGTGGCTGCCACAGGTGGCa                                                                           >  2:2518000/1‑94 (MQ=255)
                                  aaTCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATgcgcgc                                                                   >  1:1863460/1‑100 (MQ=255)
                                  aaTCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATgcgcgc                                                                   >  1:1821661/1‑100 (MQ=255)
                                  aaTCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCAAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATgcgcgc                                                                   >  2:1694677/1‑100 (MQ=255)
                                   aTCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCt                                                                  >  2:2681172/1‑100 (MQ=255)
                                   aTCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCt                                                                  <  2:716484/100‑1 (MQ=255)
                                     ccACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCa                                                                >  1:2095788/1‑100 (MQ=255)
                                     ccACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCa                                                                >  1:1497270/1‑100 (MQ=255)
                                        cGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCg                                                             <  1:1926423/100‑1 (MQ=255)
                                           gatctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaaGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCt                                                          >  1:590147‑M1/57‑100 (MQ=255)
                                            gctACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGGCACCGGCGAAGAGTCGCTGCAGCAGGTGGCAATGCGCGCTCATCGCCtt                                                         <  2:2322363/100‑1 (MQ=255)
                                             ctACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTg                                                        >  1:2731162/1‑100 (MQ=255)
                                             ctACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTg                                                        >  1:1114782/1‑100 (MQ=255)
                                              tACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAGACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTg                                                        <  2:1162263/99‑1 (MQ=255)
                                              tACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTgg                                                       <  2:931975/100‑1 (MQ=255)
                                              tACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTATATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTgg                                                       <  2:1754407/100‑1 (MQ=255)
                                              ctgttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaaGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTgg                                                       >  1:616097‑M1/54‑100 (MQ=255)
                                               acggCAAGCGCTGTGCAAACTGGCCCGGCAGATGAAAACGGTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTgg                                                       <  2:2141963/96‑1 (MQ=255)
                                                gttcgatgctggtttccgacaacatattgagattgtcagtcggcaggccaaGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGcc                                                     >  1:1214236‑M1/52‑100 (MQ=255)
                                                cTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGcc                                                     >  2:986764/1‑100 (MQ=255)
                                                 tGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCt                                                    >  2:601252/1‑100 (MQ=255)
                                                  gCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTg                                                   >  1:1305062/1‑100 (MQ=255)
                                                   cAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGc                                                  >  1:2175771/1‑100 (MQ=255)
                                                    aaaCGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGcc                                                 <  2:2425935/100‑1 (MQ=255)
                                                    aaaCGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGcc                                                 <  1:2668796/100‑1 (MQ=255)
                                                     aaCGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCg                                                <  2:807027/100‑1 (MQ=255)
                                                       cGCTGTGCAAACTGGCCCAGCAGATGAAATCGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGAc                                              <  1:1276963/100‑1 (MQ=255)
                                                       cGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACTGGCGAAGAGTCGCTGCAACCGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGAc                                              >  1:1970887/1‑100 (MQ=255)
                                                       cGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGAc                                              <  2:534395/100‑1 (MQ=255)
                                                        gCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACt                                             >  1:1656829/1‑100 (MQ=255)
                                                         cTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTg                                            <  1:2617337/100‑1 (MQ=255)
                                                         cTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTg                                            <  1:695818/100‑1 (MQ=255)
                                                            tgCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACa                                         >  2:333055/1‑100 (MQ=255)
                                                            tgCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACa                                         >  1:627289/1‑100 (MQ=255)
                                                            tgCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACa                                         >  2:1413347/1‑100 (MQ=255)
                                                            tgCAAACTGGCCCAGCAGATGAAAACACTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGAGTGACa                                         >  2:394774/1‑100 (MQ=255)
                                                             gCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACaa                                        >  2:2677069/1‑100 (MQ=255)
                                                                  cTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCa                                   <  2:374331/100‑1 (MQ=255)
                                                                   tGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCaa                                  <  2:941731/100‑1 (MQ=255)
                                                                     gCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAata                                >  1:234742/1‑100 (MQ=255)
                                                                     gCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAata                                <  1:2659567/100‑1 (MQ=255)
                                                                     gCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAata                                >  1:3497/1‑100 (MQ=255)
                                                                      cccAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAatat                               >  1:1746359/1‑100 (MQ=255)
                                                                       ccAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATAtg                              <  2:495674/100‑1 (MQ=255)
                                                                          gcagATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATAtgttg                           <  1:2402548/100‑1 (MQ=255)
                                                                          gcagATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATAtgttg                           >  1:2359729/1‑100 (MQ=255)
                                                                           cagATGAAAACGCTGTATGTGACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATAtgttgt                          >  2:1678088/1‑100 (MQ=255)
                                                                            agATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTc                         >  1:2345257/1‑100 (MQ=255)
                                                                              aTGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCgg                       <  2:1193488/100‑1 (MQ=255)
                                                                              aTGAAAACGCTGTATGTCACCGGCGAAGAGTCGATGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCAGCCGACTGACAATCTCAATATGTTGTCgg                       >  2:1654832/1‑100 (MQ=255)
                                                                               tGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGa                      >  2:1986851/1‑100 (MQ=255)
                                                                               tGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGa                      <  1:2017549/100‑1 (MQ=255)
                                                                                 aaaaCGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGaaa                    >  2:263325/1‑100 (MQ=255)
                                                                                  aaaCGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAAc                   >  1:2533081/1‑100 (MQ=255)
                                                                                    aCGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCa                 >  1:983612/1‑100 (MQ=255)
                                                                                     cGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAg                <  2:1970876/100‑1 (MQ=255)
                                                                                     cGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAg                <  2:2706699/100‑1 (MQ=255)
                                                                                         gTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATc            >  1:457785/1‑100 (MQ=255)
                                                                                          tATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCg           >  2:1361833/1‑100 (MQ=255)
                                                                                          tATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCg           <  2:969819/100‑1 (MQ=255)
                                                                                            tGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGaa         >  2:2217177/1‑100 (MQ=255)
                                                                                             gTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAAc        <  2:1961316/100‑1 (MQ=255)
                                                                                               cACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAg      >  2:2681557/1‑100 (MQ=255)
                                                                                                aCCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGa     <  2:439492/100‑1 (MQ=255)
                                                                                                aCCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGa     <  1:888413/100‑1 (MQ=255)
                                                                                                 ccGGCGAAGAGTCGCTGAAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAAc        <  2:927135/96‑1 (MQ=255)
                                                                                                   GGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCt  <  2:1147900‑M1/100‑1 (MQ=255)
                                                                                                   GGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCt  <  2:1380685‑M1/100‑1 (MQ=255)
                                                                                                   GGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCt  <  1:153758‑M1/100‑1 (MQ=255)
                                                                                                   GGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCt  <  2:2243956‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCCATTCTGATTGGCGGTAACCCTGGTGCGGGGAAATCCACGCTGCTACTGCAAACGCTGTGCAAACTGGCCCAGCAGATGAAAACGCTGTATGTCACCGGCGAAGAGTCGCTGCAACAGGTGGCAATGCGCGCTCATCGCCTTGGCCTGCCGACTGACAATCTCAATATGTTGTCGGAAACCAGCATCGAACAGATCT  >  NC_000913/4626200‑4626398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.