New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4639801 =106 (1.060)5 (0.050) 4/166 NT 5.1% coding (506/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
?NC_000913 4639844 = 87 (0.940)coding (463/717 nt) arcA response regulator in two‑component regulatory system with ArcB or CpxA
Rejected: Frequency below cutoff threshold.

Only 100 of 128 total aligned reads displayed.

TCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGC  >  NC_000913/4639702‑4639900
                                                                                                   |                                                                                                   
tgaatctgggtactgtcagcgaagaacgtcgtagcgttgaaagctacaagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctga                                                                                                     <  2:1065291‑M1/1‑1 (MQ=255)
tCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCa                                                                                                     <  1:1471357/100‑1 (MQ=255)
tCTACAGTACGGTCGGGCGGTTTCAGCTCACGGCCGGTCATTTTCTGCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCa                                                                                                     <  2:2234840/100‑1 (MQ=255)
 gaatctgggtactgtcagcgaagaacgtcgtagcgttgaaagctacaagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctga                                                                                                     >  1:2205260‑M1/99‑99 (MQ=255)
    tctgggtactgtcagcgaagaacgtcgtagcgttgaaagctacaagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctgATGgc                                                                                                 >  1:109663‑M1/96‑100 (MQ=255)
     aGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGgcg                                                                                                <  1:808232/100‑1 (MQ=255)
       tACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGcgcg                                                                                              <  2:406553/100‑1 (MQ=255)
       tACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGcgcg                                                                                              <  1:660686/100‑1 (MQ=255)
          ggTCGTGCGGTTTCAGCTCACGGCCCGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGTGTTTTCACAGAAGTGAAGCATGGCGCGGaa                                                                                           <  1:950640/100‑1 (MQ=255)
           gTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAAc                                                                                          <  2:765185/100‑1 (MQ=255)
            tCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAAc                                                                                          <  2:1017823/99‑1 (MQ=255)
              gTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCGGGGTTTTCACAGAAGTGACGCATGGCGCGGAACTCg                                                                                       >  1:906275/1‑100 (MQ=255)
                  ggTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCATGGGTTTTAACAGAAGTGACACATGGCGCGGAACTCGCTgc                                                                                   >  1:1601617/1‑100 (MQ=255)
                    tttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTgcgc                                                                                 >  1:1801683/1‑100 (MQ=255)
                     ttCAGCTCACGGCCTGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGACCTCGCTGcgcg                                                                                <  1:1661769/100‑1 (MQ=255)
                     ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg                                                                                <  1:127711/100‑1 (MQ=255)
                     ttCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGcgcg                                                                                >  1:1157492/1‑100 (MQ=255)
                       cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc                                                                              <  2:1204631/100‑1 (MQ=255)
                       cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc                                                                              <  1:10719/100‑1 (MQ=255)
                       cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc                                                                              <  1:2150636/100‑1 (MQ=255)
                       cAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGc                                                                              <  1:2127520/100‑1 (MQ=255)
                        aGCTCGCGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCa                                                                             <  2:2443220/100‑1 (MQ=255)
                        aGCTCACGGCCGGTCATGTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCa                                                                             <  1:123201/100‑1 (MQ=255)
                         gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg                                                                            <  1:842313/100‑1 (MQ=255)
                         gCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAg                                                                            >  1:2180372/1‑100 (MQ=255)
                          cTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGc                                                                           <  1:298927/100‑1 (MQ=255)
                              cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt                                                                       >  1:640755/1‑100 (MQ=255)
                              cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt                                                                       >  1:2594198/1‑100 (MQ=255)
                              cGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGt                                                                       <  2:1549827/100‑1 (MQ=255)
                                gCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTAc                                                                     <  2:1001864/100‑1 (MQ=255)
                                 ccGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACt                                                                    <  2:1388441/100‑1 (MQ=255)
                                    gTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCt                                                                 >  1:1334507/1‑100 (MQ=255)
                                    gTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCt                                                                 >  1:2744246/1‑100 (MQ=255)
                                    gTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCt                                                                 >  1:1833471/1‑100 (MQ=255)
                                     tCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTc                                                                >  1:2201724/1‑100 (MQ=255)
                                       aTTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTTCGCCGCAGCTTGTACTGCTccc                                                              >  2:2632670/1‑98 (MQ=255)
                                       aTTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGc                                                              >  1:1901891/1‑100 (MQ=255)
                                       aTTTTCTTCAGCAGTTCAGCACGGGACTGAATCTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGc                                                              <  2:124733/100‑1 (MQ=255)
                                        ttttCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGcc                                                             >  1:1065295/1‑100 (MQ=255)
                                        ttttCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGcc                                                             >  1:429555/1‑100 (MQ=255)
                                        ttttCTTCAGCAGTTCAGCACGGGACTGAATTTTGCATGGGTTTTCACAGAAGTGAAGCATGGCGAGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGcc                                                             >  2:2327536/1‑100 (MQ=255)
                                          ttcttcAGTAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCAt                                                           >  2:1272997/1‑100 (MQ=255)
                                           ctacaagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctgATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATc                                                          >  1:1679781‑M1/57‑100 (MQ=255)
                                            cttcAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCa                                                         <  2:991199/100‑1 (MQ=255)
                                             ttcAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAg                                                        <  2:2175653/100‑1 (MQ=255)
                                             acaagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctgATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAg                                                        >  1:2243951‑M1/55‑100 (MQ=255)
                                              tcAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAgg                                                       <  1:2417703/100‑1 (MQ=255)
                                              caagttcaatggttgggaactggacatcaacagccgttcgttgatcggccctgATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAgg                                                       >  1:814297‑M1/54‑100 (MQ=255)
                                               cagcagTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAggg                                                      <  1:2728029/100‑1 (MQ=255)
                                                agttcaatggttgggaactggacatcaacagccgttcgttgatcggccctgATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGc                                                     >  1:946500‑M1/52‑100 (MQ=255)
                                                agcagTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGc                                                     <  2:972456/100‑1 (MQ=255)
                                                  cagTTCAGCACGGGACTGAATTTTTCATGGGTTTTCACAGAAGTGTAGCATGGCGCGGCACTCATTGCGCGGCAACTTGTATTGCTCGCCGTCAcggac                                                    >  2:2112799/1‑97 (MQ=255)
                                                    gTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGAt                                                 >  1:1278106/1‑100 (MQ=255)
                                                    gTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGAt                                                 >  2:186910/1‑100 (MQ=255)
                                                       cAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaa                                              <  1:2554960/100‑1 (MQ=255)
                                                        aGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaac                                             <  1:1377082/100‑1 (MQ=255)
                                                         gCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacg                                            >  2:1703465/1‑100 (MQ=255)
                                                         gCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGGGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaa                                              >  2:33341/1‑98 (MQ=255)
                                                         ccACGGGACTGAGTTTTGCCTGGGTTTTCACAGAAGTGAAGCATGCCGCGGAACTCGATGCGGGGCAGCTTGTACTGCTCGCCATGAGGGCCGATCaa                                              >  2:1463315/2‑98 (MQ=255)
                                                          cACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacga                                           >  1:1741386/1‑100 (MQ=255)
                                                            cGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacgaac                                         >  2:1821402/1‑100 (MQ=255)
                                                            cGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacgaac                                         >  1:404562/1‑100 (MQ=255)
                                                             gggACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGTTCGCCATCAGGGCCGATCaacgaacg                                        <  2:911007/100‑1 (MQ=255)
                                                             gggACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCaacgaacg                                        <  1:1717831/100‑1 (MQ=255)
                                                               gACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGc                                      <  2:592538/100‑1 (MQ=255)
                                                               gACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTCGTACTGCTCGCCATCAGGGCCGATCAACGAACGGc                                      <  2:264163/100‑1 (MQ=255)
                                                                   gAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCt                                     >  2:1338060/1‑97 (MQ=255)
                                                                   gAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGtt                                  >  1:1511606/1‑100 (MQ=255)
                                                                   gAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGtt                                  >  2:1369010/1‑100 (MQ=255)
                                                                    aaTTTTGCCTGGGTGTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTg                                 <  2:1146560/100‑1 (MQ=255)
                                                                     aTTTGGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGa                                >  2:254072/1‑100 (MQ=255)
                                                                      tttgGCCTGGGTTTTCACAGAAGTGATGCATGGCGCTGAACTCGCTGCGCCGCAGCTTGTACTGCTCGCTATCAGGGCCGATCAACGAACGGCTGTTGAt                               <  2:714031/100‑1 (MQ=255)
                                                                       tttGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATg                              <  1:529391/100‑1 (MQ=255)
                                                                          gCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGATCTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                           <  2:1112942/100‑1 (MQ=255)
                                                                          gCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                           >  1:554148/1‑100 (MQ=255)
                                                                          gCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                           >  1:896163/1‑100 (MQ=255)
                                                                          gCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTcc                           >  1:1636348/1‑100 (MQ=255)
                                                                            cTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAg                         >  1:2676645/1‑100 (MQ=255)
                                                                               ggTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTc                      >  1:2484141/1‑100 (MQ=255)
                                                                               ggTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTc                      >  1:2421805/1‑100 (MQ=255)
                                                                                gTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTcc                     <  2:2143659/100‑1 (MQ=255)
                                                                                  tttCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCa                   <  1:694528/100‑1 (MQ=255)
                                                                                   ttCACAGAAGTGAAGCATGGCGCGGAACTGGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCaa                  <  2:596950/100‑1 (MQ=255)
                                                                                    tCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAc                 <  2:2146669/100‑1 (MQ=255)
                                                                                    tCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAc                 >  2:775506/1‑100 (MQ=255)
                                                                                    tCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAc                 >  2:2654781/1‑100 (MQ=255)
                                                                                     cacaGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAAcc                <  1:2528834/100‑1 (MQ=255)
                                                                                      acaGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCa               <  2:669119/100‑1 (MQ=255)
                                                                                       caGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCAt              <  1:2077252/100‑1 (MQ=255)
                                                                                        aGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCAtt             <  2:1746704/100‑1 (MQ=255)
                                                                                         gAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTg            <  1:854340/100‑1 (MQ=255)
                                                                                           aGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGaa          >  2:2486477/1‑100 (MQ=255)
                                                                                             tGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACt        <  1:583753/100‑1 (MQ=255)
                                                                                              gAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACtt       <  2:141907/100‑1 (MQ=255)
                                                                                                aGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGt     >  2:2403960/1‑100 (MQ=255)
                                                                                                 gCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTa    <  1:463462/100‑1 (MQ=255)
                                                                                                 gCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTa    <  1:607606/100‑1 (MQ=255)
                                                                                                  cATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg   <  1:2629907/100‑1 (MQ=255)
                                                                                                  cATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAg   <  1:1369016/100‑1 (MQ=255)
                                                                                                   ATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGc  <  1:1105010‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCTACAGTACGGTCGTGCGGTTTCAGCTCACGGCCGGTCATTTTCTTCAGCAGTTCAGCACGGGACTGAATTTTGCCTGGGTTTTCACAGAAGTGAAGCATGGCGCGGAACTCGCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGC  >  NC_000913/4639702‑4639900

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.