New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662311 =NA (NA)5 (0.050) 3/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 147 total aligned reads displayed.

GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410
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gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     <  1:2557089/100‑1 (MQ=255)
gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     <  2:918155/100‑1 (MQ=255)
ccgtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggc                                                                                                     >  1:1527921‑M1/100‑100 (MQ=255)
 cgtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCg                                                                                                    >  1:1618812‑M1/99‑100 (MQ=255)
  gtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCgg                                                                                                   >  2:168227‑M1/98‑100 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:95260‑M1/97‑100 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:915300‑M1/97‑100 (MQ=255)
    aggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGAt                                                                                                 <  2:2477387‑M1/5‑1 (MQ=255)
    aggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtctacagaaccccagggCGGAt                                                                                                 <  2:403178‑M1/5‑1 (MQ=255)
     tCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTACCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATg                                                                                                <  2:2515162/100‑1 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  1:1043958/1‑100 (MQ=255)
         gAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggc                                                                                            <  1:2676660/100‑1 (MQ=255)
          aGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggcg                                                                                           <  1:2555071/100‑1 (MQ=255)
          aGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggcg                                                                                           >  1:1744900/1‑100 (MQ=255)
          aGTAAATTGGTCAACTATTTACTTGACTGATTTAGGCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggcg                                                                                           <  2:1290184/100‑1 (MQ=255)
               aTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAAc                                                                                      <  1:2218850/100‑1 (MQ=255)
                ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     <  1:1343048/100‑1 (MQ=255)
                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   >  2:1976940/1‑100 (MQ=255)
                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   >  2:2079092/1‑100 (MQ=255)
                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGTCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCat                                                                                 >  2:485142/1‑99 (MQ=255)
                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  2:2218588/1‑100 (MQ=255)
                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  1:1340476/1‑100 (MQ=255)
                      aaCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCatat                                                                               >  1:1404234/1‑100 (MQ=255)
                      aaCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCat                                                                                 <  1:2006251/98‑1 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              <  2:1316701/100‑1 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  2:1076684/1‑100 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              <  1:2256988/100‑1 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              <  2:296413/100‑1 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  2:1920894/1‑100 (MQ=255)
                        cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATcc                                                                             >  1:1169254/1‑100 (MQ=255)
                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:2300366‑M1/73‑100 (MQ=255)
                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgaacagaaccgtaggtCGGATGCGGCGTGAACGCCTTATccgac                                                                          >  1:597219‑M1/73‑98 (MQ=255)
                            ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                         >  1:1837354/1‑100 (MQ=255)
                             tACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCt                                                                        <  2:1906526/100‑1 (MQ=255)
                              tccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                       >  1:1521608‑M1/70‑100 (MQ=255)
                              aCTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTg                                                                       >  1:2138112/1‑100 (MQ=255)
                               cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                      <  2:1040780/100‑1 (MQ=255)
                                 tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    <  1:2218603/100‑1 (MQ=255)
                                   aCTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGtt                                                                  >  2:2440565/1‑100 (MQ=255)
                                   aCTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGtt                                                                  >  2:2015880/1‑100 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               >  2:2003092/1‑100 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:2588821/100‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               >  2:2299969/1‑100 (MQ=255)
                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              <  1:2659593/100‑1 (MQ=255)
                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              >  1:2429307/1‑100 (MQ=255)
                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              >  1:2140483/1‑100 (MQ=255)
                                        tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                             <  1:2480106/100‑1 (MQ=255)
                                         ttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              <  1:1623334/98‑1 (MQ=255)
                                          tAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTaca                                                           >  1:2069316/1‑100 (MQ=255)
                                           aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                          >  1:754643/1‑100 (MQ=255)
                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  1:1373539/1‑100 (MQ=255)
                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  1:124764/1‑100 (MQ=255)
                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACTTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  2:1209768/1‑100 (MQ=255)
                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       <  1:2617322/100‑1 (MQ=255)
                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  1:2564619/1‑100 (MQ=255)
                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCATGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       <  2:1143313/100‑1 (MQ=255)
                                                 gTATTTAACCTTCAGTGCCATTTTTTTATCTTGGCGTTTGTACCTGTTGTCGGATGCGGCTTGTACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                    >  2:403718/1‑100 (MQ=255)
                                                   aTTTAACCTTCAGTGCCATTTTTTTCTCGTGGGGTTTGTCCCAGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                  <  2:1932771/100‑1 (MQ=37)
                                                   aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                  >  1:2615920/1‑100 (MQ=255)
                                                     ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                <  2:663649/100‑1 (MQ=255)
                                                      tgaCCTTCATTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                <  2:1132795/97‑1 (MQ=255)
                                                       aaCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGAt                                              >  1:194961/1‑100 (MQ=255)
                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             >  1:217839/1‑100 (MQ=255)
                                                         ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                            >  1:2372096/1‑100 (MQ=255)
                                                            tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         <  1:715451/100‑1 (MQ=255)
                                                            tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         >  1:235256/1‑100 (MQ=255)
                                                             cAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACg                                        <  2:651073/100‑1 (MQ=255)
                                                              aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGc                                       >  2:1377512/1‑100 (MQ=255)
                                                               gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTCAACGCCATATCCGCCCTGGGGGTCTTTACACTGTAGGCCTGATAAGACGCa                                      >  2:506765/1‑100 (MQ=255)
                                                               cttccgatcttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATGCGACGcg                                      <  1:491724/91‑2 (MQ=25)
                                                                  ccATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTa                                   >  2:12617/1‑100 (MQ=255)
                                                                   cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  2:1296912/1‑100 (MQ=255)
                                                                   cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  1:651928/1‑100 (MQ=255)
                                                                        tttgATCGTGGGGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATGTCCGCCCTGGGGTTGTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  2:1532811/100‑1 (MQ=21)
                                                                            aTCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAt                         >  1:513921/1‑100 (MQ=255)
                                                                            aTCGAGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTTATAAGACGAATAACGCGTCGcct                         <  2:81902/100‑3 (MQ=21)
                                                                             tCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATc                        <  1:2120492/100‑1 (MQ=255)
                                                                              cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGGCTGATAAGACGCATTACGCGTCGCATCa                       >  2:928351/1‑100 (MQ=255)
                                                                              cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       <  1:1930168/100‑1 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:730938/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:1490754/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      <  2:2173430/100‑1 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGGTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:1119275/1‑100 (MQ=255)
                                                                                tGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAgn                     <  2:737261/100‑2 (MQ=255)
                                                                                 ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                    >  2:587331/1‑100 (MQ=255)
                                                                                 ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                    <  2:628418/100‑1 (MQ=255)
                                                                                    gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                 <  1:1445206/100‑1 (MQ=255)
                                                                                       tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              <  2:1837347/100‑1 (MQ=255)
                                                                                       tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              <  2:310912/100‑1 (MQ=255)
                                                                                        gcaCCTGCTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCt             <  2:313868/98‑1 (MQ=255)
                                                                                         tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg            >  2:2744539/1‑100 (MQ=255)
                                                                                          aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  1:443780/1‑100 (MQ=255)
                                                                                           ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc          <  2:1520433/100‑1 (MQ=255)
                                                                                           ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc          <  2:2537766/100‑1 (MQ=255)
                                                                                            cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg         >  1:2501277/1‑100 (MQ=255)
                                                                                            cTGTTGTCGGATGCGGCGTGAACGCCATAGCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg         <  1:1119812/100‑1 (MQ=255)
                                                                                             tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgg        >  1:429780/1‑100 (MQ=255)
                                                                                                 gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGttatatg     >  2:2145818/1‑93 (MQ=255)
                                                                                                 ggCGGATATGGCGTTCACGCCGCATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgg        <  2:256299‑M1/94‑1 (MQ=255)
                                                                                                   CGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTAAACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt      <  1:2169352‑M1/96‑1 (MQ=255)
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GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.