New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662311 =NA (NA)5 (0.050) 3/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 143 total aligned reads displayed.

TTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGG  >  NC_000913/2662239‑2662435
                                                                                                  |                                                                                                  
gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                                                   >  1:2300366‑M1/73‑100 (MQ=255)
 ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                                                  >  1:1837354/1‑100 (MQ=255)
    cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                                               >  1:2602169/1‑100 (MQ=255)
    cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                                               <  2:1040780/100‑1 (MQ=255)
     cgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTggg                                                                                              >  1:2559826‑M1/68‑100 (MQ=255)
      tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                                             <  1:2218603/100‑1 (MQ=255)
        aCTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGtt                                                                                           >  2:2440565/1‑100 (MQ=255)
        aCTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGtt                                                                                           >  2:2015880/1‑100 (MQ=255)
           gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                                                        <  1:2588821/100‑1 (MQ=255)
           gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                                                        <  1:2181243/100‑1 (MQ=255)
           gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                                                        >  2:2299969/1‑100 (MQ=255)
            aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCTTGTCGTTTGTACCTGTTGTTGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                                                       >  2:201446/1‑100 (MQ=255)
            aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGTGTGACCGCCATATCCGCCCTGGGGTTCTGt                                                                                       >  2:673864/1‑100 (MQ=255)
            aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                                                       <  1:2659593/100‑1 (MQ=255)
            aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                                                       >  1:2140483/1‑100 (MQ=255)
            aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                                                       >  2:1306788/1‑100 (MQ=255)
             tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                                                      <  2:643985/100‑1 (MQ=255)
             tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                                                      <  2:1949748/100‑1 (MQ=255)
             tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                                                      <  1:2480106/100‑1 (MQ=255)
              ttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                                                       <  1:1623334/98‑1 (MQ=255)
               tAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTaca                                                                                    >  1:2069316/1‑100 (MQ=255)
                tctCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                                                   <  1:1122574/98‑1 (MQ=255)
                aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                                                   >  1:754643/1‑100 (MQ=255)
                 gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATTGTTTTTTTTTTTTTTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                                                  >  2:2491002/1‑100 (MQ=25)
                   cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacacaga                                                                                >  2:1122569/1‑97 (MQ=255)
                   cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                                                >  1:2564619/1‑100 (MQ=255)
                   cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                                                <  1:2617322/100‑1 (MQ=255)
                        aTTTAACCTTCAGTGCCATTTTTTTCTCGTGGGGTTTGTCCCAGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                                           <  2:1932771/100‑1 (MQ=37)
                        aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                                           >  1:2615920/1‑100 (MQ=255)
                          ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                                         <  2:663649/100‑1 (MQ=255)
                           tgaCCTTCATTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                                         <  2:1132795/97‑1 (MQ=255)
                           tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                                                        >  1:940120/1‑100 (MQ=255)
                            aaCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGAt                                                                       >  1:194961/1‑100 (MQ=255)
                              ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                                                     >  1:2372096/1‑100 (MQ=255)
                                ttCAGTGCCATTTTGTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTTGGGTTCTGTACACTGTAGGCCTGATAAg                                                                    <  2:2131390/99‑1 (MQ=255)
                                 tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                                                  <  1:715451/100‑1 (MQ=255)
                                 tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                                                  >  1:235256/1‑100 (MQ=255)
                                 tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                                                  <  2:924679/100‑1 (MQ=255)
                                    gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTCAACGCCATATCCGCCCTGGGGGTCTTTACACTGTAGGCCTGATAAGACGCa                                                               >  2:506765/1‑100 (MQ=255)
                                       ccATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTa                                                            >  2:12617/1‑100 (MQ=255)
                                       ccATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTa                                                            >  1:2141361/1‑100 (MQ=255)
                                         aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                                          <  1:1433817/100‑1 (MQ=255)
                                              tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                                                     <  1:1347638/100‑1 (MQ=255)
                                                 aTCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAt                                                  >  1:513921/1‑100 (MQ=255)
                                                 aTCGAGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTTATAAGACGAATAACGCGTCGcct                                                  <  2:81902/100‑3 (MQ=21)
                                                  tCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATc                                                 <  1:2120492/100‑1 (MQ=255)
                                                   cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGGCTGATAAGACGCATTACGCGTCGCATCa                                                >  2:928351/1‑100 (MQ=255)
                                                    gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                                               >  1:1490754/1‑100 (MQ=255)
                                                    gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGGTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                                               >  1:1119275/1‑100 (MQ=255)
                                                      ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                                             <  2:628418/100‑1 (MQ=255)
                                                      ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                                             >  2:587331/1‑100 (MQ=255)
                                                         gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATGCGACGCGTAATGCGTCTTATCAGGccta                                          <  2:549865/100‑4 (MQ=18)
                                                          tttGTACCTGTTGTCGGATGCGGCGTGCACGCCCTCTCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACg                                         <  1:683708/100‑1 (MQ=255)
                                                            tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc                                       <  2:310912/100‑1 (MQ=255)
                                                             gcaCCTGCTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCt                                      <  2:313868/98‑1 (MQ=255)
                                                              tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg                                     >  2:2744539/1‑100 (MQ=255)
                                                               aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt                                    >  1:443780/1‑100 (MQ=255)
                                                                ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc                                   <  2:1520433/100‑1 (MQ=255)
                                                                ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc                                   >  2:822538/1‑100 (MQ=255)
                                                                 cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg                                  >  1:2501277/1‑100 (MQ=255)
                                                                 cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCATGATAAGACGCATTACGCGTCGCATCAGGCGACGGCTGt                                    >  2:2540652/1‑98 (MQ=255)
                                                                 cTGTTGTCGGATGCGGCGTGAACGCCATAGCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg                                  <  1:1119812/100‑1 (MQ=255)
                                                                  tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgg                                 >  1:429780/1‑100 (MQ=255)
                                                                   gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa                                >  2:1894422/1‑100 (MQ=255)
                                                                   gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTATGTACACTGTAGGCCTGATGAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa                                >  2:1500508/1‑100 (MQ=255)
                                                                   cagggcggatatggcgttcacgccgcatccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa                                >  1:1521608‑M2/32‑100 (MQ=255)
                                                                      gtcggataaggcgttcacgccgcatccgACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc                             >  1:597219‑M2/29‑100 (MQ=255)
                                                                      gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGttatatg                              >  2:2145818/1‑93 (MQ=255)
                                                                      ggcggatatggcgttcacgccgcatccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc                             >  1:2300366‑M2/29‑100 (MQ=255)
                                                                      ggcggatatggcgttcacgccgcatccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc                             >  1:2543799‑M2/29‑100 (MQ=255)
                                                                      ggCGGATATGGCGTTCACGCCGCATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgg                                 <  2:256299‑M1/94‑1 (MQ=255)
                                                                        CGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcgg                           <  1:2394577‑M1/100‑1 (MQ=255)
                                                                        CGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTAAACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt                               <  1:2169352‑M1/96‑1 (MQ=255)
                                                                            TGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTg                       <  2:280598‑M1/100‑1 (MQ=255)
                                                                             ccgatctGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGa                      <  1:1273972/94‑1 (MQ=255)
                                                                              cggcgTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAtaaggcgttca                     <  1:1740157/100‑11 (MQ=255)
                                                                              cggcgTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGaa                     >  1:2657902/1‑100 (MQ=255)
                                                                              cggcgTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGaa                     >  2:1185735/1‑100 (MQ=255)
                                                                                    gAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGaagatcgg               >  2:1273967/1‑94 (MQ=255)
                                                                                      aCGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTAt             >  2:2166728/1‑100 (MQ=255)
                                                                                      aCGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGACGCGGCGTGAACGCCTTAt             >  2:1162917/1‑100 (MQ=255)
                                                                                       cGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATc            >  1:1930942/1‑100 (MQ=255)
                                                                                       cGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATc            <  2:1216746/100‑1 (MQ=255)
                                                                                         ccATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCg          >  1:1413774/1‑100 (MQ=255)
                                                                                         ccATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCg          >  2:395464/1‑100 (MQ=255)
                                                                                         ccATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCg          >  1:1912188/1‑100 (MQ=255)
                                                                                           atatCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAc        <  1:1510234/100‑1 (MQ=255)
                                                                                            tatCCGCCCTGTGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAcc       <  2:1340471/100‑1 (MQ=12)
                                                                                            tatCCGCCCTGGGGTTGTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAcc       <  2:336790/100‑1 (MQ=255)
                                                                                            tatCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAcc       >  2:1893436/1‑100 (MQ=255)
                                                                                            tatCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGAcc       <  2:1738189/100‑1 (MQ=255)
                                                                                             atccgCCCTGGGGTTCTGTAGACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCt      <  2:403178‑M2/95‑1 (MQ=255)
                                                                                             atccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCt      >  1:1500960‑M2/6‑100 (MQ=255)
                                                                                             atccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCt      <  2:2477387‑M2/95‑1 (MQ=255)
                                                                                             atCCGCCCTGGGGTTCTGTGCACGGTAGGCCTGATAGGACGCGTTGCGCGTCGCATCAGGCAAGGGGTGTCGGATAAGGCGTGCACGCCGCATCCGAc        <  2:1746308/98‑1 (MQ=9)
                                                                                               ccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc    >  1:488641‑M2/4‑100 (MQ=255)
                                                                                               ccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc    >  2:168227‑M2/4‑100 (MQ=255)
                                                                                               ccgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTAc    >  2:2328337‑M2/4‑100 (MQ=255)
                                                                                                cgCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACg   >  1:1618812‑M2/3‑100 (MQ=255)
                                                                                                 gCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACgg  >  1:1527921‑M2/2‑100 (MQ=255)
                                                                                                  |                                                                                                  
TTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGG  >  NC_000913/2662239‑2662435

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.