New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2894837NA (NA)10 (0.110) 5/164 NT NA noncoding (30/67 nt) REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2894870 NA (NA)noncoding (63/67 nt) REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 124 total aligned reads displayed.

CGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTG  >  NC_000913/2894738‑2894936
                                                                                                   |                                                                                                   
cGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAgc                                                                                                     <  1:899769/100‑1 (MQ=255)
   ggTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcc                                                                                                  <  1:1425014‑M1/100‑4 (MQ=255)
   ggTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcc                                                                                                  <  1:1542502‑M1/100‑4 (MQ=255)
      cTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctga                                                                                               >  2:1698033‑M1/1‑94 (MQ=255)
      cTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATGTGTATGCCGCACGCCACATCCGACATTCAACgcctg                                                                                                >  2:2499135‑M1/1‑94 (MQ=255)
       tGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgat                                                                                              <  1:412187‑M1/100‑8 (MQ=255)
        ggACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgatc                                                                                             >  1:2217989‑M1/1‑92 (MQ=255)
        ggACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATg                                                                                             <  1:1751904/100‑1 (MQ=255)
         gACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGc                                                                                            <  1:1571466/100‑1 (MQ=255)
          aaaaaaaaaaaaaaaTTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATg                                                                                             <  2:1732720/89‑1 (MQ=255)
           cGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGa                                                                                          <  2:68058/100‑1 (MQ=255)
            gTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGAc                                                                                         <  2:346920/100‑1 (MQ=255)
              tAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGc                                                                                       <  2:2334203/100‑1 (MQ=255)
               aGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCt                                                                                      >  2:158682/1‑100 (MQ=255)
               aGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCt                                                                                      <  2:2346498/100‑1 (MQ=255)
               aGCGAAAAAATTACTTGGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGc                                                                                       <  1:1202160/99‑1 (MQ=255)
                 cGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGACCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTg                                                                                    >  1:1281085/1‑100 (MQ=255)
                  gAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGa                                                                                   >  2:1734621/1‑100 (MQ=255)
                  gAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGa                                                                                   >  2:2105943/1‑100 (MQ=255)
                   aaaaaaTTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAc                                                                                  <  1:1375448/100‑1 (MQ=255)
                    aaaaaTTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcg                                                                                 <  1:1022937/100‑1 (MQ=255)
                     aaaaTTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGAcgc                                                                                <  1:1910092/100‑1 (MQ=255)
                            cTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAT                                                                         <  1:523019‑M2/100‑1 (MQ=255)
                            cTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAT                                                                         >  1:2223116‑M2/1‑100 (MQ=255)
                            cTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTAT                                                                         <  1:2242521‑M2/100‑1 (MQ=255)
                               tGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAG                                                                      <  1:950551‑M2/100‑1 (MQ=255)
                               tGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAG                                                                      <  1:1696823‑M2/100‑1 (MQ=255)
                                gACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                     >  1:1786818‑M2/1‑100 (MQ=255)
                                gACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGG                                                                     <  1:1561328‑M2/100‑1 (MQ=255)
                                 aCGGGATAATCGTAACCAATTGAATTTTGTTTGCTTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                    >  2:601146‑M2/1‑100 (MQ=255)
                                 aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggc                                                                    <  2:660864‑M1/100‑34 (MQ=255)
                                 aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggc                                                                    <  1:606221‑M1/100‑34 (MQ=255)
                                 aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                    >  1:2633160‑M2/1‑100 (MQ=255)
                                  cGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggcg                                                                   <  1:1215866‑M1/100‑35 (MQ=255)
                                  cGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggc                                                                    <  1:519908‑M1/99‑34 (MQ=255)
                                   gggATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCCCGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggcgc                                                                  <  1:684315‑M1/100‑36 (MQ=255)
                                   gggATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggcgc                                                                  <  1:883068‑M1/100‑36 (MQ=255)
                                    ggATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggcgct                                                                 <  1:571432‑M1/100‑37 (MQ=255)
                                     gATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCgcctgataagacgcgtcaagcgtcgcatcaggcgc                                                                  <  1:936478‑M1/98‑36 (MQ=255)
                                     gATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc                                                                <  2:1182509/100‑1 (MQ=255)
                                      aTAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                               <  1:920068/100‑1 (MQ=255)
                                       tAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCAGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGACCTACaa                                                              >  2:1474853/1‑100 (MQ=255)
                                        aaTCGTAACCAATTGAATGTGGTTTGATTGGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCCTATCAGGCGTACAAg                                                             <  2:549505/100‑1 (MQ=37)
                                         aTCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGt                                                            <  1:776833/100‑1 (MQ=255)
                                          tCGTAACCAATTGAATTTCGTTTGGTTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGGCGCTTGACGCGTCTTATCAGGCCTACAAg                                                             <  2:106216/98‑1 (MQ=255)
                                             tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTcccc                                                        <  2:1172886/100‑1 (MQ=255)
                                               aCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAg                                                      >  1:608539/1‑100 (MQ=255)
                                               aCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAg                                                      <  1:2160529/100‑1 (MQ=255)
                                                ccAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAgg                                                     <  2:523018/100‑1 (MQ=255)
                                                      gAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGaa                                               <  1:2573813/100‑1 (MQ=255)
                                                           tGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCCACAAGTCCCCAGGCCAGAACCGt                                           >  1:1123911/1‑99 (MQ=255)
                                                            ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                         <  2:2525256/100‑1 (MQ=255)
                                                            ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                         <  2:2450068/100‑1 (MQ=255)
                                                            ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                         <  1:1506666/100‑1 (MQ=255)
                                                             gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                        >  2:2173546/1‑100 (MQ=255)
                                                             gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                        <  2:395914/100‑1 (MQ=255)
                                                             gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                        >  1:1638423/1‑100 (MQ=255)
                                                              tttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGc                                       >  1:3632/1‑100 (MQ=255)
                                                               ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCa                                      <  2:791681/100‑1 (MQ=255)
                                                                tGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAg                                     >  2:2726592/1‑100 (MQ=255)
                                                                 gATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAgg                                    <  1:2373276/100‑1 (MQ=255)
                                                                      gTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGatcat                               >  1:614598/1‑100 (MQ=255)
                                                                      gTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATACGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGatcat                               >  2:1475364/1‑100 (MQ=255)
                                                                         ggCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTGGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATcc                             <  2:1760557/99‑1 (MQ=255)
                                                                         ggCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACCCTTGACGCGTCTTATCAGGCCCACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATcc                             >  2:1123081/1‑99 (MQ=255)
                                                                          gCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCgg                           <  2:651143/100‑1 (MQ=255)
                                                                           ccGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGc                          <  1:2555577/100‑1 (MQ=255)
                                                                            cGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACGAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCa                         >  2:1493499/1‑100 (MQ=255)
                                                                            cGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCa                         >  2:404673/1‑100 (MQ=255)
                                                                            cGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTCACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCa                         <  1:2039595/100‑1 (MQ=255)
                                                                              cACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAac                       <  1:2682179/100‑1 (MQ=255)
                                                                               aCGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCACAGGCCAGAACCGTAGGCAGGATCATCCGGCAaca                      <  2:377812/100‑1 (MQ=255)
                                                                                     caTCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTAt                <  1:1605669/100‑1 (MQ=255)
                                                                                       tCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTg              >  2:363163/1‑100 (MQ=255)
                                                                                       tCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTg              <  1:1870118/100‑1 (MQ=255)
                                                                                        ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg             <  2:575010/100‑1 (MQ=255)
                                                                                        ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg             <  2:501292/100‑1 (MQ=255)
                                                                                        ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg             >  1:683958/1‑100 (MQ=255)
                                                                                        ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCACCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg             >  1:352419/1‑100 (MQ=255)
                                                                                         cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc            >  1:1887001/1‑100 (MQ=255)
                                                                                         cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc            >  1:1418222/1‑100 (MQ=255)
                                                                                         cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc            <  2:434352/100‑1 (MQ=255)
                                                                                          gACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaaagtcggatgtggcgcgcggcctacaaatcaaaccaaattcaattggttacg           <  1:512333‑M2/100‑58 (MQ=255)
                                                                                          gACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCa           >  1:2067556/1‑100 (MQ=255)
                                                                                           aCATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCaa          >  2:761556/1‑100 (MQ=255)
                                                                                             aTTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc        <  1:1785299/100‑1 (MQ=255)
                                                                                             aTTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc        <  2:370470/100‑1 (MQ=255)
                                                                                              ttCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCt       >  2:440698/1‑100 (MQ=255)
                                                                                                 aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg    >  1:454857/1‑100 (MQ=255)
                                                                                                 aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg    >  1:624879/1‑100 (MQ=255)
                                                                                                 aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg    >  1:685801/1‑100 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatccc   <  1:883068‑M2/100‑66 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatccc   <  2:381448‑M2/100‑66 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatc     <  1:936478‑M2/98‑64 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgggcggcctacaaatcaaaccaaattcaattggttacgattatccc   <  1:684315‑M2/100‑66 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGCAACGTAGGCAGGATCCTCCGGCAACACGTTATTGGCAATCTg      >  2:269649/1‑97 (MQ=255)
                                                                                                  gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGt   >  2:1102910/1‑100 (MQ=255)
                                                                                                   cgcCTGATGCGACGCTTGACGCGTCTTATCAGGTCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTg  <  2:859371/100‑1 (MQ=255)
                                                                                                   cgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccg  <  1:1215866‑M2/100‑67 (MQ=255)
                                                                                                   cgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTg  <  1:1595326/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CGGGGTCTGGACGTTAGCGAAAAAATTACTTTGACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTG  >  NC_000913/2894738‑2894936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.