New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2894837NA (NA)10 (0.110) 5/164 NT NA noncoding (30/67 nt) REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2894870 NA (NA)noncoding (63/67 nt) REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences REP201 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 134 total aligned reads displayed.

ACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTT  >  NC_000913/2894771‑2894969
                                                                                                   |                                                                                                   
aCGGGATAATCGTAACCAATTGAATTTTGTTTGCTTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                                                     >  2:601146‑M2/1‑100 (MQ=255)
aCGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGC                                                                                                     >  1:2633160‑M2/1‑100 (MQ=255)
  gggATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCt                                                                                                   <  1:274656/100‑1 (MQ=255)
    gATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc                                                                                                 <  2:1182509/100‑1 (MQ=255)
     aTAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACa                                                                                                <  1:920068/100‑1 (MQ=255)
      tAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCAGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGACCTACaa                                                                                               >  2:1474853/1‑100 (MQ=255)
        aTCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGt                                                                                             <  1:776833/100‑1 (MQ=255)
         tCGTAACCAATTGAATTTCGTTTGGTTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGGCGCTTGACGCGTCTTATCAGGCCTACAAg                                                                                              <  2:106216/98‑1 (MQ=255)
           gTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGACGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTccc                                                                                          >  2:1854637/1‑100 (MQ=255)
            tAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTcccc                                                                                         <  2:1172886/100‑1 (MQ=255)
              aCCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAg                                                                                       <  1:2160529/100‑1 (MQ=255)
               ccAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAgg                                                                                      <  2:523018/100‑1 (MQ=255)
                     gAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGaa                                                                                <  1:2573813/100‑1 (MQ=255)
                          tGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCCACAAGTCCCCAGGCCAGAACCGt                                                                            >  1:1123911/1‑99 (MQ=255)
                           ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                                                          <  1:1506666/100‑1 (MQ=255)
                           ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                                                          <  2:2525256/100‑1 (MQ=255)
                           ggTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAg                                                                          <  2:2450068/100‑1 (MQ=255)
                            gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                                                         <  2:395914/100‑1 (MQ=255)
                            gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                                                         >  1:1638423/1‑100 (MQ=255)
                            gTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAgg                                                                         >  2:2173546/1‑100 (MQ=255)
                             tttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGc                                                                        >  1:3632/1‑100 (MQ=255)
                              ttGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCa                                                                       <  2:791681/100‑1 (MQ=255)
                               tGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAg                                                                      >  2:2726592/1‑100 (MQ=255)
                                gATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACTCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAgg                                                                     >  2:1080153/1‑100 (MQ=255)
                                gATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAgg                                                                     >  2:2428306/1‑100 (MQ=255)
                                gATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAgg                                                                     <  1:2373276/100‑1 (MQ=255)
                                     gTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGatcat                                                                >  1:614598/1‑100 (MQ=255)
                                     gTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATACGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGatcat                                                                >  2:1475364/1‑100 (MQ=255)
                                        ggCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTGGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATcc                                                              <  2:1760557/99‑1 (MQ=255)
                                         gCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCgg                                                            <  2:651143/100‑1 (MQ=255)
                                         gCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCgg                                                            <  1:933211/100‑1 (MQ=255)
                                           cGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCa                                                          >  2:404673/1‑100 (MQ=255)
                                           cGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTCACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCa                                                          <  1:2039595/100‑1 (MQ=255)
                                              aCGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCACAGGCCAGAACCGTAGGCAGGATCATCCGGCAaca                                                       <  2:377812/100‑1 (MQ=255)
                                                 ccACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGt                                                    >  1:2491171/1‑100 (MQ=255)
                                                 caacacCCGCCATTCCGCGCCTGATGAGACGCTCGACGAGTCTTATCAGGCACCCAAGTACCCAGGCACGAACCGTAGGCAGGATACTCCGGc                                                           <  2:550266/91‑1 (MQ=255)
                                                    caTCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTAt                                                 <  1:1605669/100‑1 (MQ=255)
                                                       ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg                                              >  1:683958/1‑100 (MQ=255)
                                                       ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg                                              <  2:575010/100‑1 (MQ=255)
                                                       ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg                                              <  2:501292/100‑1 (MQ=255)
                                                       ccGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCACCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTgg                                              >  1:352419/1‑100 (MQ=255)
                                                        cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc                                             <  2:434352/100‑1 (MQ=255)
                                                        cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc                                             >  1:1418222/1‑100 (MQ=255)
                                                        cGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGc                                             >  1:1887001/1‑100 (MQ=255)
                                                         gACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaaagtcggatgtggcgcgcggcctacaaatcaaaccaaattcaattggttacg                                            <  1:512333‑M2/100‑58 (MQ=255)
                                                         gACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCa                                            >  1:2067556/1‑100 (MQ=255)
                                                          aCATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCaa                                           >  2:761556/1‑100 (MQ=255)
                                                            aTTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc                                         <  2:370470/100‑1 (MQ=255)
                                                            aTTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATc                                         <  1:1785299/100‑1 (MQ=255)
                                                             ttCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCt                                        >  2:440698/1‑100 (MQ=255)
                                                             ttCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCt                                        >  1:1747452/1‑100 (MQ=255)
                                                                aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcc                                     <  1:571432‑M2/100‑65 (MQ=255)
                                                                aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg                                     >  1:454857/1‑100 (MQ=255)
                                                                aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg                                     >  1:685801/1‑100 (MQ=255)
                                                                aGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCg                                     >  1:624879/1‑100 (MQ=255)
                                                                 gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatccc                                    <  2:381448‑M2/100‑66 (MQ=255)
                                                                 gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgggcggcctacaaatcaaaccaaattcaattggttacgattatccc                                    <  1:684315‑M2/100‑66 (MQ=255)
                                                                 gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGCAACGTAGGCAGGATCCTCCGGCAACACGTTATTGGCAATCTg                                       >  2:269649/1‑97 (MQ=255)
                                                                 gcgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGt                                    >  2:1102910/1‑100 (MQ=255)
                                                                  cgcCTGATGCGACGCTTGACGCGTCTTATCAGGTCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTg                                   <  2:859371/100‑1 (MQ=255)
                                                                  cgcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTg                                   <  1:1595326/100‑1 (MQ=255)
                                                                   gcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgt                                  <  1:606221‑M2/100‑68 (MQ=255)
                                                                   gcCTGATGCGACGCTTGACGCGTCTTATCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgt                                  <  2:660864‑M2/100‑68 (MQ=255)
                                                                   gcCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGa                                  <  2:906893/100‑1 (MQ=255)
                                                                      tGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATg                               <  1:1510209/100‑1 (MQ=255)
                                                                      tGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCAGCAACACGTTATTGGCAATCTGCGTGAATg                               <  2:1221123/100‑1 (MQ=255)
                                                                          gCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTg                           <  2:1785668/100‑1 (MQ=255)
                                                                          gCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTg                           <  1:2597860/100‑1 (MQ=255)
                                                                           cGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGt                          >  2:1305429/1‑100 (MQ=255)
                                                                            gACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTc                         <  1:442030/100‑1 (MQ=255)
                                                                             aCGCTTGACGCGTCTTATCAGGCCTACAAGGCCCCAGGCCAGAACCGTAGGCAGTATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTc                         <  1:603672/99‑1 (MQ=255)
                                                                               gCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCAcc                      >  1:1783436/1‑100 (MQ=255)
                                                                                  tGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGt                   >  1:1899491/1‑100 (MQ=255)
                                                                                     cgcgTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGcc                >  1:1407591/1‑100 (MQ=255)
                                                                                      gcgttgtATCAGGCCTACAAGTCCCCAGGCCAGAATCGTAGTCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTg                  <  2:2328303/91‑1 (MQ=255)
                                                                                      gcgTCTTGTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGAGCATCCGGCTACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGcc                <  2:63653/99‑1 (MQ=255)
                                                                                       cgTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTc              >  2:282224/1‑100 (MQ=255)
                                                                                        gTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTcc             >  1:1127686/1‑100 (MQ=255)
                                                                                          cTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAg           >  1:243881/1‑100 (MQ=255)
                                                                                          cTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAg           >  1:1154517/1‑100 (MQ=255)
                                                                                          cTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCCGCGTGAATGTTTGTCACCAGTGCCTCCAg           >  2:330785/1‑100 (MQ=255)
                                                                                           ttATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCACCACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGc          >  2:245149/1‑100 (MQ=255)
                                                                                           ttATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGc          <  1:2453451/100‑1 (MQ=255)
                                                                                           ttATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGc          <  1:2081197/100‑1 (MQ=255)
                                                                                            tATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGca         >  1:86047/1‑100 (MQ=255)
                                                                                            tATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAAGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGca         >  2:2330259/1‑100 (MQ=255)
                                                                                            gatCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgtcaaagtaattttttcgctaacgtcc         >  1:2217989‑M2/2‑8 (MQ=255)
                                                                                             aTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac        >  1:818672/1‑100 (MQ=255)
                                                                                             aTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac        >  1:612766/1‑100 (MQ=255)
                                                                                             aTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac        <  2:2651283/100‑1 (MQ=255)
                                                                                             aTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac        <  2:2193983/100‑1 (MQ=255)
                                                                                             aTCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACAAGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcac        <  2:1521605/100‑1 (MQ=255)
                                                                                              tCAGGCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgtcaaagtaattttttcgctaacgtccag       >  2:1698033‑M2/1‑6 (MQ=255)
                                                                                                aGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcaccac     >  2:707080/1‑100 (MQ=255)
                                                                                                aGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGcaccac     >  2:2350308/1‑100 (MQ=255)
                                                                                                 ggCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgtcaaagtaattttttcgctaacgtccagacc    <  1:1542502‑M2/100‑98 (MQ=255)
                                                                                                 ggCgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgtcaaagtaattttttcgctaacgtccagacc    <  1:1425014‑M2/100‑98 (MQ=255)
                                                                                                   cgctgaatgtcggatgtggcgtgcggcctacaaatcaaaccaaattcaattggttacgattatcccgtcaaagtaattttttcgctaacgtccagacccc  >  1:1886591‑M2/1‑1 (MQ=255)
                                                                                                   ccTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACttt  >  2:2202660/1‑100 (MQ=255)
                                                                                                   ccTACAAGTCCCCAAGCCAGAACCGTCGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATATTTGTCACCAGTGCCTCCAGCACCACttt  >  2:1636481/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACGGGATAATCGTAACCAATTGAATTTGGTTTGATTTGTAGGCCGCACGCCACATCCGACATTCAGCGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCCCCAGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTT  >  NC_000913/2894771‑2894969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.