New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4035360 | NA (NA) | 11 (0.120) | 4/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 | tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 1:1052234‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 2:1940218‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:898812‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:423529‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:1952705‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 2:357993‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 1:2403288‑M2/100‑1 (MQ=255) attatGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctct < 1:1331255‑M2/100‑61 (MQ=255) cttccgatctcgccgctgagaaaaagCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccgg > 2:1453732‑M2/11‑35 (MQ=255) cacaCCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccgga < 1:1489412‑M2/100‑67 (MQ=255) cacCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagaggcaagcatttatttttgctttctctgccggagt < 2:2247250‑M2/100‑69 (MQ=255) ccccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 2:1285121‑M2/100‑71 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:937569‑M2/100‑71 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1785600‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagatcggaag < 1:1453738‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCAGCgcggggtgtgcataatacgccttcccgctacagaggcaagcatttatttttgctttctctgccggagttctcagg < 2:1597375‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:1895773‑M2/100‑76 (MQ=255) cgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggcga < 2:1003129‑M2/100‑79 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttttttttttttccggagttatcaggagaaccccgctgacccgg < 2:1220221‑M2/99‑94 (MQ=255) agcgGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggc < 2:1239000‑M2/100‑95 (MQ=255) gcggcgcggggtgtgcataatacgccttcccgctacagagtcaagcattgatttttgctttctctgccggagttctcaggagaaccccgctgaccc > 2:1522880‑M2/1‑5 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg > 1:62343‑M2/1‑4 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg > 1:904203‑M2/1‑4 (MQ=255) cggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcgg < 2:1706724‑M2/100‑97 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc < 1:2286628‑M2/100‑98 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggc < 1:1757660‑M2/100‑98 (MQ=255) ggcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagatctcaggagaaccccgctgacccggcggc < 1:1157417‑M2/100‑98 (MQ=255) gcgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcg > 1:2222622‑M2/1‑2 (MQ=255) cgcggggtgtgcataatatgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcaggagaaccccgctgacccggcggcgn > 2:711293‑M2/1‑1 (MQ=255) | TCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAAAATGAATACCAAGTCTCAAGAGTG > NC_000913/4035285‑4035483 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |