BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4554509 =	NA (NA)	6 (0.070)	5/164	NT	NA	noncoding (5/34 nt)	REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP346 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4554539 =	NA (NA)	6 (0.070)	5/164	NT	NA	intergenic (+178/‑37)	uxuB/uxuR	D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor

Only 100 of 146 total aligned reads displayed.

CGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCT  >  NC_000913/4554442‑4554637

aggtctttgcgcagaggtggcagatttcatggtgttgtgtccgttaggtgcggttaatcaaatttttGCCGGATAAGGCGTTCACGCCGCATCCGGCaaa                                                                                                  >  1:1099540‑M1/68‑100 (MQ=255)

 gTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaa                                                                                                 >  2:1553891/1‑100 (MQ=255)

  tGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCaaaaa                                                                                                >  2:1767013/1‑100 (MQ=255)

   gCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAt                                                                                               >  2:2104800/1‑100 (MQ=255)

   gCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAt                                                                                               <  1:2049232/100‑1 (MQ=255)

    ccACCTTCCCGTGCTCATGGTATCGTTTGAGATTACCGGCGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCCCATCCGGCAAAAAtt                                                                                              <  2:2041069/100‑1 (MQ=25)

     cAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAAttt                                                                                             >  2:610532/1‑100 (MQ=255)

      aaCTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCGGGCAAAAATTTg                                                                                            <  1:1806264/100‑1 (MQ=255)

      aaCTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTg                                                                                            <  2:2724076/100‑1 (MQ=255)

       tgcgcagaggtggcagatttcatggtgttgtgtccgttaggtgcggttaatcaaatttttGCCGTATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGa                                                                                           >  2:714057‑M1/61‑100 (MQ=255)

        cTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGAt                                                                                          <  1:1040048/100‑1 (MQ=255)

        cTTCCAGTGCTAATGGTATACTTTGAAATTACCGGGGGCCGTAAACTTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGAt                                                                                          <  2:1191435/100‑1 (MQ=37)

        actCCAGTGCTAATGGTAGAGTTTAACATTGCCAGGGGCGGTAAAATTGCCCGTTGTAGAACGAATAAGGCGTTCACCCCGCATCCGGCTAAAATTTGAt                                                                                          <  2:149435/98‑1 (MQ=255)

         cgcagaggtggcagatttcatggtgttgtttccgttaggtgcgttttatctaatttttGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGAt                                                                                          >  2:1827680‑M1/59‑99 (MQ=255)

          tCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTa                                                                                        >  1:587450/1‑100 (MQ=255)

          tCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTa                                                                                        >  2:1506732/1‑100 (MQ=255)

            cAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAc                                                                                      <  2:2276659/100‑1 (MQ=255)

             aGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAAc                                                                                      <  1:387398/99‑1 (MQ=255)

              gTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCg                                                                                    >  1:2352907/1‑100 (MQ=255)

              gTGCTAATGGTATAGGGTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCg                                                                                    >  2:811153/1‑100 (MQ=255)

                gCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCa                                                                                  >  1:991805/1‑100 (MQ=255)

                gCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCa                                                                                  >  1:196925/1‑100 (MQ=255)

                 cTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCAc                                                                                 <  1:2201895/100‑1 (MQ=255)

                  tAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCAcc                                                                                >  1:2426409/1‑100 (MQ=255)

                   aaTGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCt                                                                               >  1:2276211/1‑100 (MQ=255)

                      ggTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAAc                                                                            >  2:2010887/1‑100 (MQ=255)

                       gTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACg                                                                           <  2:1009501/100‑1 (MQ=255)

                        tataGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACgg                                                                          <  2:355595/100‑1 (MQ=255)

                           aGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGaca                                                                       <  1:1704216/100‑1 (MQ=255)

                            gTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGacac                                                                      <  2:2498489/100‑1 (MQ=255)

                            gTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTCGTAGGCCGGATAAGGCGGTCACGCCGCATCCGGCACAACTTTGATTAACCGCACCTAACg                                                                           >  2:1443111/1‑95 (MQ=37)

                            gTTGGAGATTAATGGGGGCCGCGGAATTGCCCGTTGTAGGCCGGCTAAGGCGTTCACGCCGCGTCCGGCAGAACGTGGATTACCCGCATCTAGAGGaca                                                                       >  2:908116/1‑99 (MQ=12)

                               tGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACacaac                                                                   <  2:1197678/100‑1 (MQ=255)

                                gagaTTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACacaaca                                                                  >  2:892982/1‑100 (MQ=255)

                                gagaTTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACacaaca                                                                  >  1:805399/1‑100 (MQ=255)

                                 agaTTAGCGGGGGCCGTAAAATTGCCTGTTGTAGGACGGATAAGGCGTTGACGCCGCATCCGGCAGAAACTTGATTAACAGCACCTAACGGACACAacac                                                                 >  2:2449892/1‑100 (MQ=25)

                                 agaTTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAacac                                                                 >  2:964732/1‑100 (MQ=255)

                                   aTTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGTCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCTCCTAACGGACACAACACCa                                                               >  1:588109/1‑100 (MQ=255)

                                   aTTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCa                                                               >  2:1160970/1‑100 (MQ=255)

                                    ctAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCCCCTAACGGACACAacac                                                                 <  2:1331084/96‑1 (MQ=255)

                                     tAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATg                                                             <  1:1493665/100‑1 (MQ=255)

                                      aaCGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGa                                                            <  1:908810/100‑1 (MQ=255)

                                       aCGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGaa                                                           >  2:1089305/1‑100 (MQ=255)

                                        cGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGaaa                                                          <  1:1385380/100‑1 (MQ=255)

                                         gggggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAAt                                                         >  2:470298/1‑100 (MQ=255)

                                          ggggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACCCAACACCATGAAATc                                                        >  1:2708498/1‑100 (MQ=255)

                                            ggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTg                                                      <  2:1912222/100‑1 (MQ=255)

                                            ggCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTg                                                      <  2:473599/100‑1 (MQ=255)

                                             gCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGc                                                     <  2:2465954/100‑1 (MQ=255)

                                             gCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGAGTTGACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGa                                                            <  2:2663599/93‑1 (MQ=255)

                                               cGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCa                                                   >  2:1534940/1‑100 (MQ=255)

                                                gTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACTCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCAc                                                  <  1:365071/100‑1 (MQ=255)

                                                gTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCAc                                                  >  1:1109908/1‑100 (MQ=255)

                                                    aaTTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACctcn                                              <  1:2674937/100‑2 (MQ=255)

                                                     aTTGCCCGTTGTAGGCCGGATACGGCGTGCACGCCGCATCCGGTAAACGTTTGATTAACCGCGCCTAACGGCCAAAACACCATGAAATCTGCCACct                                                >  2:640994/1‑97 (MQ=255)

                                                       aatcaaatttttgccggatgcggcgtgaacgccttatccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcg                                           >  2:1507681‑M2/43‑100 (MQ=255)

                                                        gCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTgcgc                                          >  1:1244608/1‑100 (MQ=255)

                                                         tcaaatttttgccggatgcggcgtgaacgccttatccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCa                                         >  1:1387870‑M2/41‑100 (MQ=255)

                                                         tcaaatttttgccggatgcggcgtgaacgccttatacggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCa                                         >  2:714057‑M2/41‑100 (MQ=255)

                                                         cccGTTGTAGGCCGGATAAGGCGTTCACGCCGCCTCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTacgc                                          >  2:2108174/1‑99 (MQ=255)

                                                          ccGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCaa                                        >  1:2096529/1‑100 (MQ=255)

                                                            gTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAg                                      <  1:1687947/100‑1 (MQ=255)

                                                             ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGa                                     <  2:2555534/100‑1 (MQ=255)

                                                             ttGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGa                                     <  2:359258/100‑1 (MQ=255)

                                                              tGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGAc                                    >  1:559937/1‑100 (MQ=255)

                                                               gTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGAcc                                   <  2:1185811/100‑1 (MQ=255)

                                                                 aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCtt                                 >  1:1654663/1‑100 (MQ=255)

                                                                 aGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCtt                                 >  2:1359948/1‑100 (MQ=255)

                                                                   gccggatgcggcgtgaacgccttatccggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               >  1:2583326‑M2/31‑100 (MQ=255)

                                                                   GCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               <  2:956691‑M1/100‑1 (MQ=255)

                                                                   GCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               >  2:1134555‑M1/1‑100 (MQ=255)

                                                                   GCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               <  2:1579023‑M1/100‑1 (MQ=255)

                                                                   GCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAc                               <  1:1835639‑M1/100‑1 (MQ=255)

                                                                    CCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTAcc                              >  1:956695‑M1/1‑100 (MQ=255)

                                                                      GGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAg                            >  2:2210864‑M1/1‑100 (MQ=255)

                                                                            ggCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTc                      >  2:2185788/1‑100 (MQ=255)

                                                                            ggCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTc                      >  2:854175/1‑100 (MQ=255)

                                                                            ggCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTc                      >  2:1885836/1‑100 (MQ=255)

                                                                               gTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCggg                   >  2:1534423/1‑100 (MQ=255)

                                                                                 tCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGc                 >  1:111302/1‑100 (MQ=255)

                                                                                 tCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGc                 >  1:932014/1‑100 (MQ=255)

                                                                                 tCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGc                 >  1:1939700/1‑100 (MQ=255)

                                                                                  cACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCg                >  1:2666816/1‑100 (MQ=255)

                                                                                   aCGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACACCACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCg                >  2:413636/1‑99 (MQ=255)

                                                                                   aCGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCga               >  2:1096657/1‑100 (MQ=255)

                                                                                    cgccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgat              >  1:820104/1‑100 (MQ=255)

                                                                                    cgccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCga               >  1:2464830/1‑99 (MQ=255)

                                                                                     gccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgatg             >  1:1057426/1‑100 (MQ=255)

                                                                                      ccgcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCgatga            >  1:2650712/1‑100 (MQ=255)

                                                                                        gcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATc          <  1:549885/100‑1 (MQ=255)

                                                                                        gcATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATc          >  2:1738018/1‑100 (MQ=255)

                                                                                         cATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATcc         >  1:2543596/1‑100 (MQ=255)

                                                                                         cATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATcc         >  1:639821/1‑100 (MQ=255)

                                                                                         cATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATcc         >  2:1776872/1‑100 (MQ=255)

                                                                                              ggcAAAAGTTTGATTAACCGCTCCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGAt    <  2:1030847‑M2/97‑1 (MQ=255)

                                                                                              ggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGTGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGAt    >  1:2197334‑M2/4‑100 (MQ=255)

                                                                                              ggcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGAt    >  1:2577‑M2/4‑100 (MQ=255)

                                                                                              ggCAAAAGTTTGATTAACCGGACTTAACGGACGCAACACAATGAAATATGACACCTCTGCTCACAGACCTTACCAGGAAGACGGGGCgctga            >  2:1345938/1‑92 (MQ=255)

                                                                                               gcAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGcgaac   <  1:1858664‑M2/98‑3 (MQ=255)

                                                                                                cAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCt  >  1:1644632‑M2/2‑100 (MQ=255)

CGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAAAATTTGATTAACCGCACCTAACGGACACAACACCATGAAATCTGCCACCTCTGCGCAAAGACCTTACCAGGAAGTCGGGGCGATGATCCGCGATCT  >  NC_000913/4554442‑4554637

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.