| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 489959 = | NA (NA) | 7 (0.080) | 5/164 | NT | NA | noncoding (1/98 nt) | RIP43 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP43 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3547917 = | NA (NA) | noncoding (31/87 nt) | REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP254 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 124 total aligned reads displayed.
ACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGT > NC_000913/3547819‑3548016 | aCCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCt < 1:1771680/100‑1 (MQ=255) ccATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTa > 2:1670295/1‑100 (MQ=255) ccATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTa > 2:567821/1‑100 (MQ=255) cATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTAc > 2:1352371/1‑100 (MQ=255) cATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTAc > 1:80906/1‑100 (MQ=255) cATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTAc < 1:2666084/100‑1 (MQ=255) cATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTAc > 1:2590271/1‑100 (MQ=255) ttATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGa > 1:1358733/1‑100 (MQ=255) tATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGAt > 1:1008557/1‑100 (MQ=255) tctcGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTc > 2:419201/1‑100 (MQ=255) tcGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCgg > 1:1444237/1‑100 (MQ=255) tcGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCgg < 1:419202/100‑1 (MQ=255) ggTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCggg < 2:127590/99‑1 (MQ=255) tgtgCGGTCTGGTAGGCTGTCTGCTGCTGAATGTGGTGCTTTGATCACACTGACTGCCGGATGCGGCGTGACCGACTTATCCGGCCTACGATTCGGGATg > 2:1689093/1‑100 (MQ=38) tgtgCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATg < 1:1965967/100‑1 (MQ=255) gtgCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGa < 2:1171055/100‑1 (MQ=255) tgCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGaa > 1:2046331/1‑100 (MQ=255) ttatcaggcctacaccgctcctgcaatatattgaattcttgcggtttcgtaggccggataaggcggtcacgccgcatacggcctacgaaaccgcaa > 1:2456415‑M2/83‑88 (MQ=255) gCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAAt < 1:2669750/100‑1 (MQ=255) cGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGACGGATGCGGCGTGACAGCCTTATACGGCCTACGAATCGGGATGAAtt > 2:869721/1‑100 (MQ=38) ggTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATta > 1:2648758/1‑100 (MQ=255) gTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATtag < 1:2042838/100‑1 (MQ=255) ggTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAgg < 1:1289966/100‑1 (MQ=255) tAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGCTTCGGGATGAATTAGTAGGcc < 1:1195443/100‑1 (MQ=255) tAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGcc > 1:1356826/1‑100 (MQ=255) aGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCg > 1:115200/1‑100 (MQ=255) aGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCg > 2:2630678/1‑100 (MQ=255) ggCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCgg < 1:2411087/100‑1 (MQ=255) gCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGa > 1:2122476/1‑100 (MQ=255) tGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATa > 2:2555554/1‑100 (MQ=255) tGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATa < 2:1660922/100‑1 (MQ=255) tGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATa < 1:288750/100‑1 (MQ=255) gctgctgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGAcg > 2:194715/1‑100 (MQ=255) gctgctgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGAc > 1:62321/1‑99 (MQ=255) tgctgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGAcgcg < 2:2590253/100‑1 (MQ=255) tgctgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGAcgcg > 1:870112/1‑100 (MQ=255) tgctgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGAcgcg > 1:1765165/1‑100 (MQ=255) tgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTc > 2:1624008/1‑99 (MQ=255) tgAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCa > 2:73074/1‑100 (MQ=255) gAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCaa < 1:1353260/100‑1 (MQ=255) atatGGTGATTTGATAACACCGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgc < 1:1378480/100‑1 (MQ=255) tatGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgca < 1:186012/100‑1 (MQ=255) atGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgcat > 1:2041405/1‑100 (MQ=255) ggTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgcatcg < 1:2534281/100‑1 (MQ=255) gTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgcatcgc > 1:1345814/1‑100 (MQ=255) gTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAgcatcgc > 2:1977464/1‑100 (MQ=255) gTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGAATCGGGATGAATGAGTAGGCCGGATAAGACGCGTCAAgcatcgc < 2:1770036/100‑1 (MQ=255) ttGATAACACTGACTGCCGGATGCGGTGTGACTGAGTTATCCGGCCTACGATTCGGGATGAATTAGGAGGGCGGATAAGACGCGTGAAgcatcgcat < 2:1258601/97‑1 (MQ=37) tGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCgg < 1:84340/100‑1 (MQ=255) gATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGc > 2:1717030/1‑100 (MQ=255) gATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGc > 2:393215/1‑100 (MQ=255) aTAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCa > 2:635395/1‑100 (MQ=255) aTAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCa > 1:2189197/1‑100 (MQ=255) tAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCAt > 2:243587/1‑100 (MQ=255) tAACACTGACTGCCGGATGCGGCGTGACCGCCTTATACGGACTACGCTTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCCCATACGACa > 2:2599426/1‑99 (MQ=25) cacTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGACTTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATc > 2:1726244/1‑98 (MQ=255) cacTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCagtca > 2:1842044/1‑96 (MQ=255) actgactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAAc > 1:1258490/1‑100 (MQ=255) actgactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAAc < 1:2126506/100‑1 (MQ=255) actgactgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAAc > 1:384520/1‑100 (MQ=255) ctgactgCCGGATGCGGCGTGACCGCCTTATCGGGCCTACGATTCGGGATGAACTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCagtcag > 1:2606740/1‑94 (MQ=21) cgtaggccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGGAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCg > 2:1754035‑M2/36‑100 (MQ=255) gtaggccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGc > 1:727819‑M2/35‑100 (MQ=255) actgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCa > 2:370426/1‑100 (MQ=255) ctgCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCAc < 2:282259/100‑1 (MQ=255) ggccggatatggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCAct > 2:1729911‑M2/32‑100 (MQ=255) ggccggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCAct > 1:1533078‑M2/32‑100 (MQ=255) gCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc < 2:522829/100‑1 (MQ=255) gCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc > 2:2355836/1‑100 (MQ=255) gCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc > 2:210799/1‑100 (MQ=255) gCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc > 1:323822/1‑100 (MQ=255) gCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCActc > 2:170299/1‑100 (MQ=255) cggataaggcggtcacgccgcatccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTa > 1:1260716‑M2/29‑100 (MQ=255) ggATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTAc < 1:2429867/100‑1 (MQ=255) gagggggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTAct < 2:1911265/95‑1 (MQ=255) gATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTAc < 1:1777750/99‑1 (MQ=255) aTGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActt < 1:726989/100‑1 (MQ=255) tGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActcc > 1:715900/1‑98 (MQ=255) tGCGGCGTGACCGCCTTATCAGGCCTGCGATTCGGGATGAATTAGTAGGCCGGATACGACGCGTCACGCGTCGCATCCGGCATAAACCGCACTCTActt > 2:1229105/1‑99 (MQ=38) gcggcgTGGCCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtct < 1:1842617/100‑1 (MQ=255) gcggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtct < 2:30931/100‑1 (MQ=255) cggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtctt > 1:2321362/1‑100 (MQ=255) cggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtctt > 2:278410/1‑100 (MQ=255) cggcgTGACCGCCTTATCAGGCCTACGATTCGGGATGAATTAGTAAGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtctt > 2:520785/1‑100 (MQ=255) ggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtcttc < 1:210799/100‑1 (MQ=255) ggcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtcttc > 2:2396170/1‑100 (MQ=255) gcgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtcttct > 1:2005384/1‑100 (MQ=255) cgTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTActtcttctt > 2:476953/1‑100 (MQ=255) gTGACCGCCTTATCCGGCTTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACttcttcttc < 2:348813/100‑1 (MQ=255) gACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGc > 1:1138451/1‑100 (MQ=255) ccGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTg < 2:870109/100‑1 (MQ=255) ccGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTg > 2:20660/1‑100 (MQ=255) ccGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTg > 1:40143/1‑100 (MQ=255) ccGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTg > 1:2070980/1‑100 (MQ=255) ccGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTg > 1:1121268/1‑100 (MQ=255) cGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGc < 1:244625/100‑1 (MQ=255) cTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGc < 2:1617727/100‑1 (MQ=255) ttATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGCATAACACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGc < 2:1494753/99‑1 (MQ=255) ccggcCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTgc > 2:1920428‑M2/6‑100 (MQ=255) cTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGt > 2:766266/1‑100 (MQ=255) | ACCATTATCTCGGTGTGCGGTCTGGTAGGCTGTCTGCTGCTGAATATGGTGATTTGATAACACTGACTGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGATTCGGGATGAATTAGTAGGCCGGATAAGACGCGTCAAGCATCGCATCCGGCATCAACCGCACTCTACTTCTTCTTCGCTGCAGCTCTGCGCCGT > NC_000913/3547819‑3548016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |