BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1382908	NA (NA)	4 (0.040)	4/172	NT	NA	noncoding (42/74 nt)	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	= 1382940	NA (NA)	4 (0.040)	4/172	NT	NA	noncoding (74/74 nt)	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP113 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 129 total aligned reads displayed.

TACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACT  >  NC_000913/1382841‑1383039

tACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGC                                                                                                     >  1:122238‑M2/1‑100 (MQ=255)

tACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGC                                                                                                     >  1:250231‑M2/1‑100 (MQ=255)

tACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGC                                                                                                     <  1:2136769‑M2/100‑1 (MQ=255)

 aCTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGTTAGCATCGCATCTGGCa                                                                                                    <  1:1534835/100‑1 (MQ=255)

  cTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCAt                                                                                                   <  2:376137/100‑1 (MQ=255)

    cGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTc                                                                                                 <  2:2171759/100‑1 (MQ=255)

     gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                                                >  2:573223/1‑100 (MQ=255)

     gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                                                <  2:513064/100‑1 (MQ=255)

     gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                                                <  2:2738455/100‑1 (MQ=255)

     gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                                                <  2:194198/100‑1 (MQ=255)

     gTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCa                                                                                                >  1:1627226/1‑100 (MQ=255)

      ttCTGATAATTGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGTATTAGATGCGCTAGCATCGCATCTGGCATTCAg                                                                                               <  2:1802385/100‑1 (MQ=255)

      ttCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAg                                                                                               <  1:1262593/100‑1 (MQ=255)

      ttCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAg                                                                                               <  2:520370/100‑1 (MQ=255)

       tCTGATACTCGGCTAAATTGTCGGGTGCGGGGCAAGTACTTTTTCCCTTCTATAAATGTAGGTCGGATAAGATGCGCTAGCATTGCATCTGTTATTCAgc                                                                                              <  2:1637985/100‑2 (MQ=19)

       tCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTAGTTTATCCGATCTATAGATGTTGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAgg                                                                                              <  2:2598483/100‑1 (MQ=255)

       tCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAgg                                                                                              <  2:60306/100‑1 (MQ=255)

        cTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGc                                                                                             <  1:745126/100‑1 (MQ=255)

           aTAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAg                                                                                          >  2:1158653/1‑100 (MQ=255)

            tAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAgg                                                                                         >  2:1490732/1‑100 (MQ=255)

              aTGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTa                                                                                       >  1:182974/1‑100 (MQ=255)

               tGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAg                                                                                      <  1:657022/100‑1 (MQ=255)

                 ggCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCt                                                                                    >  1:1823638/1‑100 (MQ=255)

                 ggCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCt                                                                                    >  2:459222/1‑100 (MQ=255)

                 ggCTAAATTCTCGGTTGCGGCGCGAGTACTTTAGCCGATCTATAAATGTAGGCCGGATCAGGTGCGCTAGCATCGCATCTGGCATTCAGGCGAGGt                                                                                        >  2:2402585/1‑96 (MQ=255)

                  gCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTg                                                                                   >  2:1116529/1‑100 (MQ=255)

                    tAAATTGCCGGATGCTGCGCGAGTACTTTATCCGATCTATATATGTAGGCCGGATAAGTTGCGCTAGCATAGCATATGACATTCAGGCAAGGAAGCTGGt                                                                                 >  2:194990/1‑100 (MQ=255)

                      aaTTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtat                                                                               >  2:1166400/1‑100 (MQ=255)

                           ccGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGtatttatt                                                                          <  1:2638686/100‑1 (MQ=255)

                            cGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTatttattt                                                                         >  1:869367/1‑100 (MQ=255)

                             ggATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTc                                                                        <  2:1624458/100‑1 (MQ=255)

                             ggATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTc                                                                        <  1:2258750/100‑1 (MQ=255)

                              gATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCa                                                                       <  2:1005447/100‑1 (MQ=255)

                                 gcggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                                                    <  1:1158658/100‑1 (MQ=255)

                                 gcggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                                                    >  2:1280690/1‑100 (MQ=255)

                                 gcggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATAGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                                                    >  2:1154870/1‑100 (MQ=255)

                                 ctcttcgatctACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCg                                                                    <  2:2628383/90‑1 (MQ=255)

                                  cggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGt                                                                   >  1:360515/1‑100 (MQ=255)

                                   ggcgCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTc                                                                  >  1:398916/1‑100 (MQ=255)

                                    gcgcGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCa                                                                 <  2:196393/100‑1 (MQ=255)

                                            aCTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTg                                                         <  1:627750/100‑1 (MQ=255)

                                            aCTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTg                                                         >  1:2056876/1‑100 (MQ=255)

                                            aCTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTg                                                         <  2:2056863/100‑1 (MQ=255)

                                             cTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTgg                                                        >  2:737017/1‑100 (MQ=255)

                                             cTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTgg                                                        >  1:807291/1‑100 (MQ=255)

                                             cTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTgg                                                        >  1:2412273/1‑100 (MQ=255)

                                               ttATCCGGTCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGGGTCATATGCGTgg                                                        >  2:1437370/1‑98 (MQ=255)

                                               ttATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCctacatttatagatcggataaagtactcgcgccgcatccggcaattt                                                      <  1:2500923‑M2/100‑48 (MQ=255)

                                                  tCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATGCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACg                                                   <  2:1056653/100‑1 (MQ=255)

                                                    cGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGt                                                 >  1:1636789/1‑100 (MQ=255)

                                                     gATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCctacatttatagatcggataaagtactcgcgccgcatccggcaatttagccga                                                <  1:1417490‑M2/100‑54 (MQ=255)

                                                     gATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTa                                                >  2:87517/1‑100 (MQ=255)

                                                         tataGATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAatat                                            >  1:715764/1‑100 (MQ=255)

                                                         tataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAatat                                            >  2:2229289/1‑100 (MQ=255)

                                                         tataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAata                                             <  2:1798281/99‑1 (MQ=255)

                                                          ataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCCACGGTAATAtt                                           >  1:933183/1‑100 (MQ=255)

                                                          ataAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATAtt                                           <  2:2093445/100‑1 (MQ=255)

                                                           taAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTc                                          <  2:2098379/100‑1 (MQ=255)

                                                           taAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTc                                          >  1:817780/1‑100 (MQ=255)

                                                             aaTGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCtg                                        >  2:304798/1‑100 (MQ=255)

                                                              aTGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCtgt                                       <  1:1754120/100‑1 (MQ=255)

                                                                gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg                                     >  1:1195460/1‑100 (MQ=255)

                                                                gTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtgg                                     <  1:1327304/100‑1 (MQ=255)

                                                                  aGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTgtggtg                                   >  2:1419658/1‑100 (MQ=255)

                                                                   ggCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGa                                  >  1:1982151/1‑100 (MQ=255)

                                                                    nccGGATAAGATGCGCTAGCATCGCATCCGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGAc                                 >  2:493118/2‑100 (MQ=255)

                                                                    gCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGAc                                 <  1:2075366/100‑1 (MQ=255)

                                                                     ccGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACg                                >  1:1325540/1‑100 (MQ=255)

                                                                     ccGGATAAGATGCGCTAGCATCGCATCCGGCctacatttatagatcggataaagtactcgcgccgcatccgggaaattagaccattatcagaacgagtaa                                <  2:2195051‑M2/100‑70 (MQ=255)

                                                                      cGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGAc                                 >  2:1669092/1‑98 (MQ=255)

                                                                      cGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACgg                               <  2:407288/100‑1 (MQ=255)

                                                                         aTAAGATGCGCTAGCATCGCATCTGGCATTCAGGCACGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGttt                            <  1:2620538/100‑1 (MQ=255)

                                                                            aGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTcc                         <  2:591795/100‑1 (MQ=255)

                                                                             gATGCGCTAGTATTGCATCTGGCATTCACGCAAGGTAGCTGGTATTTATTTCAGCGTCATATTCGTCGCAACGGTAATATTCTGTTGTGACGGTTTTCCa                        <  2:1074475/100‑1 (MQ=255)

                                                                             gATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCa                        >  1:2240177/1‑100 (MQ=255)

                                                                              aTGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAg                       >  1:1820500/1‑100 (MQ=255)

                                                                              aTGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAg                       <  1:2066554/100‑1 (MQ=255)

                                                                               tGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGa                      <  2:41805/100‑1 (MQ=255)

                                                                                  gcTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGaaan                   <  1:2492706/100‑2 (MQ=255)

                                                                                  gcTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAAt                   <  2:1250715/100‑1 (MQ=255)

                                                                                  gcTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAAt                   <  2:2726704/100‑1 (MQ=255)

                                                                                  gatgctagcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAAt                   <  2:295603/92‑1 (MQ=255)

                                                                                    tAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTa                 <  1:1008600/100‑1 (MQ=255)

                                                                                      gcatcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAg               >  1:99553/1‑100 (MQ=255)

                                                                                      gcatcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAg               >  2:153080/1‑100 (MQ=255)

                                                                                        atcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCg             <  2:2156656/100‑1 (MQ=255)

                                                                                         tcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCgg            >  1:2017991/1‑100 (MQ=255)

                                                                                         tcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCgg            >  1:151500/1‑100 (MQ=255)

                                                                                         tcgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCgg            >  1:151850/1‑100 (MQ=255)

                                                                                          cgcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGa           >  2:143055/1‑100 (MQ=255)

                                                                                           gcatcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGaa          <  2:1165431/100‑1 (MQ=255)

                                                                                            catcTGGCATGCAGGCAAGGTAGCTGGTATTTATTTCAGGGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGaat         <  1:2126386/100‑1 (MQ=255)

                                                                                              tcTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGaataa       >  1:2415275/1‑100 (MQ=255)

                                                                                               cTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGaataat      >  2:1335459/1‑100 (MQ=255)

                                                                                                tGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAataata     <  2:697866/100‑1 (MQ=255)

                                                                                                 ggCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAAtaataa    >  1:1389298/1‑100 (MQ=255)

                                                                                                 ggCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAAtaataa    >  2:1864053/1‑100 (MQ=255)

                                                                                                 ggCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAAtaataa    >  1:380222/1‑100 (MQ=255)

                                                                                                   cctacatttatagatcggataaagtactcgcgccgcatccggcaatttagcccattatcagaacgagtaatttacgccgacacctgcataatggaattta  <  1:2567126‑M2/100‑100 (MQ=255)

                                                                                                   cATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACt  <  2:1997078/100‑1 (MQ=255)

TACTCGTTCTGATAATGGGCTAAATTGCCGGATGCGGCGCGAGTACTTTATCCGATCTATAAATGTAGGCCGGATAAGATGCGCTAGCATCGCATCTGGCATTCAGGCAAGGTAGCTGGTATTTATTTCAGCGTCATATGCGTGGCAACGGTAATATTCTGTGGTGACGGTTTTCCAGAAATTAAGCGGAATAATAACT  >  NC_000913/1382841‑1383039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.