New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2282891 =NA (NA)5 (0.050) 4/164 NT NA noncoding (5/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2282921 = NA (NA)intergenic (+120/+19) rplY/yejK 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein

Only 100 of 109 total aligned reads displayed.

ACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTT  >  NC_000913/2282823‑2283018
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gccgaatttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    >  1:2440055‑M1/69‑100 (MQ=255)
 ccgaatttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  1:2310980‑M1/68‑100 (MQ=255)
 ccgaatttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  1:844182‑M1/68‑100 (MQ=255)
 ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  2:706237/1‑100 (MQ=255)
 ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  2:2464810/1‑100 (MQ=255)
 ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    >  2:1915329/1‑99 (MQ=255)
 ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAAATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  2:381624/1‑100 (MQ=255)
  cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                                                  <  2:774513/100‑1 (MQ=255)
   ccgccggagcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                                                 >  2:1451171/9‑100 (MQ=255)
   ccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                                                 >  1:585031/1‑100 (MQ=255)
    cGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAg                                                                                                <  2:1777710/100‑1 (MQ=255)
     gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                                               <  1:1358594/100‑1 (MQ=255)
     gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                                               >  1:2310191/1‑100 (MQ=255)
     gCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGa                                                                                               <  2:585029/100‑1 (MQ=255)
      tttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatgccagataaggcgttcacgccgcatctggcATTCAGaa                                                                                              <  1:936691‑M2/8‑1 (MQ=255)
      cTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGaa                                                                                              <  1:819193/100‑1 (MQ=255)
       tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGCTAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                             <  2:809145/100‑1 (MQ=255)
       tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                             <  1:606564/100‑1 (MQ=255)
       tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                             <  1:2611845/100‑1 (MQ=255)
        ccGGCGGGGTTTTTTTTTTTTTTTTATTATGCCTGATGACGGGATTGCTATTTTTTGCAGGACAGATAAGGCGTTCACGCCCCATCTGGCATTCAGaa                                                                                              >  2:1061917/1‑98 (MQ=21)
        ccGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                             <  2:202562/99‑1 (MQ=255)
          ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                          <  1:970834/100‑1 (MQ=255)
           gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                          <  2:1721414/99‑1 (MQ=255)
            cggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaaa                                                                                        >  2:2196798/1‑100 (MQ=255)
              gggTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAc                                                                                      <  1:1202097/100‑1 (MQ=255)
                gTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                                                    >  1:323818/1‑100 (MQ=255)
                gTTTTCTGTATCTCCAGATGATGCCTGACTGCGGTGATGCTATGTTTTGCAGGCCAGATAAGGCGTTCCCGCCGCAACTGCCATTCAGTac                                                                                             <  2:14457/91‑1 (MQ=19)
                   ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                                                 >  2:1966763/1‑100 (MQ=255)
                   ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                                                 <  1:783616/100‑1 (MQ=255)
                    tttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTa                                                                                >  1:2393981/1‑100 (MQ=255)
                     ttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTaa                                                                               >  1:1819708/1‑100 (MQ=255)
                       gTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt                                                                             >  1:2120676/1‑100 (MQ=255)
                       gTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAAtt                                                                             <  2:1226924/100‑1 (MQ=255)
                         aTCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc                                                                           >  2:2557411/1‑100 (MQ=255)
                          tCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑c                                                                        >  2:636190/1‑100 (MQ=255)
                           cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cg                                                                       >  1:1622959/1‑100 (MQ=255)
                            tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgc                                                                      >  1:1389723/1‑100 (MQ=255)
                             gCAGCTTATGCCTCATTACTATATGGCTATTTTTGGCAGGCCAATCAGGGCTTTCACGCCGTATCTGTCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc                                                                     <  1:1304474/100‑1 (MQ=255)
                             gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc                                                                     >  1:688835/1‑100 (MQ=255)
                             gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc                                                                     <  1:1725762/100‑1 (MQ=255)
                             gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgc‑‑cgcc                                                                     <  1:1422383/100‑1 (MQ=255)
                                    aTGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTc                                                              >  1:1803528/1‑100 (MQ=255)
                                     tGCCTGATTACGGTATTGCTATTTTTTGCAGTCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTcc                                                             <  2:638361/100‑1 (MQ=255)
                                      gCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCg                                                            >  1:1631175/1‑100 (MQ=255)
                                       ccTGATTACGGTATTGCTATTTTTTTTTTTTTTTTTAAGGCGTTAACGCCGCATCTGGCATTGAGAACACAAAAGCGATTAATTGC‑‑CGCCAGACGTcc                                                             >  2:59882/1‑98 (MQ=255)
                                        cTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgc                                                          <  1:653068/100‑1 (MQ=255)
                                         tGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcg                                                         <  2:695233/100‑1 (MQ=255)
                                         tGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcg                                                         <  1:1066056/100‑1 (MQ=255)
                                          gATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGgcgc                                                        >  1:754696/1‑100 (MQ=255)
                                            ttACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTg                                                      >  1:676565/1‑100 (MQ=255)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCTGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGc                                                     <  2:535446/100‑1 (MQ=255)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCAGCGCCGGACGTCTGgcggc                                                       <  1:1140138/100‑3 (MQ=37)
                                              aCGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCa                                                    >  2:1770355/1‑100 (MQ=255)
                                                   aTTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTgg                                               <  1:1047703/100‑1 (MQ=255)
                                                   aTTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTg                                                <  1:503262/99‑1 (MQ=255)
                                                    ttGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGt                                              <  1:1765529/100‑1 (MQ=255)
                                                     tGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGATCACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTc                                             >  1:1267168/1‑100 (MQ=255)
                                                      gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg                                            >  1:2421917/1‑100 (MQ=255)
                                                      gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg                                            >  1:231322/1‑100 (MQ=255)
                                                      gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg                                            >  2:2636267/1‑100 (MQ=255)
                                                      gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcg                                            >  2:1301874/1‑100 (MQ=255)
                                                        tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcgcg                                          <  1:1775160/100‑1 (MQ=255)
                                                        tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcgcg                                          <  1:401884/100‑1 (MQ=255)
                                                        tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTcgcg                                          <  1:2644700/100‑1 (MQ=255)
                                                            ttctgaatGCCAGATGCGGCGTGAACGCCTTATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaaa                                      <  1:936691‑M1/92‑1 (MQ=255)
                                                              ttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAAtt                                    <  1:2207365/100‑1 (MQ=255)
                                                              ttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAAtt                                    >  1:676289/1‑100 (MQ=255)
                                                               tGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTc                                   >  2:2555388/1‑100 (MQ=255)
                                                                gCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcg                                  >  1:808050/1‑100 (MQ=255)
                                                                 cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg                                 >  2:743655/1‑100 (MQ=255)
                                                                 cAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg                                 >  2:2008463/1‑100 (MQ=255)
                                                                 aatgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg                                 >  1:844182‑M2/34‑100 (MQ=255)
                                                                 aatgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcgg                                 >  1:2310980‑M2/34‑100 (MQ=255)
                                                                  atgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                >  1:2440055‑M2/33‑100 (MQ=255)
                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAACTTcggcg                               >  1:2135495/1‑100 (MQ=255)
                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg                               >  1:1579857/1‑100 (MQ=255)
                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg                               >  1:1218149/1‑100 (MQ=255)
                                                                    GCCAGATAAGGCGTTCACGCCGCACCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcgg                              >  2:228958‑M1/1‑100 (MQ=255)
                                                                     ccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCggcggc                             >  1:2171222‑M2/30‑100 (MQ=255)
                                                                       AGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGt                           <  2:2672646‑M1/100‑1 (MQ=255)
                                                                        GATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTg                          <  2:786347‑M1/100‑1 (MQ=255)
                                                                          TAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGcc                        >  2:1912686‑M1/1‑100 (MQ=255)
                                                                          TAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGcc                        >  1:1268147‑M1/1‑100 (MQ=255)
                                                                            aGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtt                      >  1:475732/1‑100 (MQ=255)
                                                                             ggCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCttt                     >  2:380422/1‑100 (MQ=255)
                                                                               cGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTaa                   >  1:615070/1‑100 (MQ=255)
                                                                                gTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAAt                  <  1:381624/100‑1 (MQ=255)
                                                                                gTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAAt                  >  1:811454/1‑100 (MQ=255)
                                                                                gTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAAt                  <  2:1527723/100‑1 (MQ=255)
                                                                                   cACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGt               >  1:136283/1‑100 (MQ=255)
                                                                                   cACGCCGCATCTGGCATTAAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTCGTCGCGCACATTCGGCGGCGGGCCTTTAATgg                >  2:298758/1‑99 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg           <  1:2348466/100‑1 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg           >  2:1308995/1‑100 (MQ=255)
                                                                                        cgcATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAgg          >  2:3152/1‑100 (MQ=255)
                                                                                        cgcATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAgg          <  2:274912/100‑1 (MQ=255)
                                                                                        cgcATCTGGCATTCAGAACACAAAACCGATTAATGGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg           <  2:70876/99‑1 (MQ=255)
                                                                                             ctggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCg     >  1:2707893‑M2/6‑100 (MQ=255)
                                                                                             cTGCCATCCAAAACACAAACCCGATTAATAGC‑‑CGCCAGACCTCCGGCCCTGCAATTGGACGCGCAAATTCCGCGGCGTGCCTTTAATGGTCAAGGTATc      <  2:1569588/99‑1 (MQ=255)
                                                                                               ggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGt   <  1:2464826‑M2/97‑1 (MQ=255)
                                                                                               ggcATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGt   <  2:2564142‑M2/97‑1 (MQ=255)
                                                                                                  |                                                                                                   
ACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGC‑‑CGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTT  >  NC_000913/2282823‑2283018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.