New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3217434 =NA (NA)7 (0.080) 7/164 NT NA noncoding (1/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3217467 = NA (NA)noncoding (34/89 nt) REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 163 total aligned reads displayed.

ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAG  >  NC_000913/3217368‑3217564
                                                                                                   |                                                                                                 
ggagcacaatgcctgatgcgatgctggcgcatcttatcaggcctgcggggtgtgtagcgggtgtagGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                   >  1:2521479‑M1/67‑100 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                   <  1:784207/100‑1 (MQ=255)
aCCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGcc                                                                                                   >  1:1362645/1‑100 (MQ=255)
 ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                  <  1:2084471/100‑1 (MQ=255)
 ccGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCt                                                                                                  >  1:245409/1‑100 (MQ=255)
     gccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGTATGCGACGCTTGACGCGCCTTATCCGGCCTaca                                                                                               >  2:2676852/1‑99 (MQ=255)
     gccgaTTTTGATATTACGCAACTGGATTAATCGCCGCATGCGCCAGTGGCGCGGTGCAAGTGCCGGATGCGACGCTTGACGCGCCGTATCCGGCCTac                                                                                                >  2:42954/1‑98 (MQ=25)
      ccgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAcc                                                                                             >  1:756989/1‑100 (MQ=255)
       cgcTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACAccc                                                                                            <  1:2533448/100‑1 (MQ=255)
       cgcTTTGGATATTACGCAACTGGATTAATCGCCGCAGCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTacac                                                                                              <  2:2503562/98‑1 (MQ=255)
         cTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGc                                                                                          <  1:295302/100‑1 (MQ=255)
           tttGATATTACGCAACTGGATTACTCGCCGCATCCGCCAGTGGCGCGGTGAAATTGCCGGACGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCt                                                                                         <  2:1189831/99‑1 (MQ=255)
            ttGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTac                                                                                       >  1:2101278/1‑100 (MQ=255)
             tGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTaca                                                                                      >  1:2368008/1‑100 (MQ=255)
              gATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacac                                                                                     <  2:2182778/100‑1 (MQ=255)
              gATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacac                                                                                     <  1:644139/100‑1 (MQ=255)
               ntatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacaca                                                                                    >  2:737341/2‑100 (MQ=255)
               atatTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTacaca                                                                                    >  2:1786830/1‑100 (MQ=255)
                     cGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGc                                                                              >  1:528568/1‑100 (MQ=255)
                      gCAGCTGGATTAATCGCCGCATCCGCCAGTGGCGCGTTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCa                                                                             <  1:1048300/100‑1 (MQ=255)
                       cAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAg                                                                            <  1:2071877/100‑1 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                         >  2:442825/1‑100 (MQ=255)
                          cTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGcc                                                                         <  1:1892540/100‑1 (MQ=255)
                           tGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCt                                                                        >  1:2218859/1‑100 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGGCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                       <  2:365622/100‑1 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                       >  1:327702/1‑100 (MQ=255)
                            ggATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTg                                                                       <  1:1439667/100‑1 (MQ=255)
                             gATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGa                                                                      <  1:1463719/100‑1 (MQ=255)
                             gATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGa                                                                      >  2:2115018/1‑100 (MQ=255)
                              aTTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGAt                                                                     >  1:1238855/1‑100 (MQ=255)
                              aTTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGAt                                                                     <  1:2214273/100‑1 (MQ=255)
                                 aaTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGCTGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAg                                                                  >  2:1693815/1‑100 (MQ=255)
                                 aaTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATa                                                                    <  2:267737/98‑1 (MQ=255)
                                 aaTCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAg                                                                  >  1:870586/1‑100 (MQ=255)
                                   tCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGAt                                                                >  2:1064976/1‑100 (MQ=255)
                                   tCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGAt                                                                <  1:244361/100‑1 (MQ=255)
                                      ccgcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATgcg                                                             <  2:2060701/100‑1 (MQ=255)
                                        gcATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGcc                                                           <  2:1938327/100‑1 (MQ=255)
                                         cctgcggggtgtgtagcgggtgtaggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCa                                                          >  1:1219315‑M2/59‑100 (MQ=255)
                                         cATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCa                                                          >  1:1320673/1‑100 (MQ=255)
                                          aTCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAg                                                         <  2:260425/100‑1 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                      <  2:2367993/100‑1 (MQ=255)
                                             cGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcat                                                      >  1:865183/1‑100 (MQ=255)
                                             cGCCAGTGGCGCAGTGCAATTGCCGGACGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGCTAAGCTGCGCCCgc                                                        >  2:1888110/1‑98 (MQ=37)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                    <  2:2241104/100‑1 (MQ=255)
                                               ccAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAgcatcg                                                    <  2:2413761/100‑1 (MQ=255)
                                                    ggCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCa                                               >  2:1113849/1‑100 (MQ=255)
                                                     gcgcGGTACAAGTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCGGCAGGCCTGATAAGATGCGCCAGCATCACATCAg                                              >  2:1443390/1‑100 (MQ=38)
                                                       gcgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGc                                            <  2:2113897/100‑1 (MQ=255)
                                                        cgGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGc                                            <  2:2744853/99‑1 (MQ=255)
                                                         ggTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCa                                           <  2:2630349/99‑1 (MQ=255)
                                                          gTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCAtt                                         <  2:1390574/100‑1 (MQ=255)
                                                           tGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtg                                        <  2:938847/100‑1 (MQ=255)
                                                            gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGCTCAGAAGCGCCAGCATCGCATCAGGCATtgt                                       >  2:707556/1‑100 (MQ=255)
                                                            gCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCACAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtg                                        >  2:825293/1‑99 (MQ=255)
                                                              aaTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGc                                     <  2:1132920/100‑1 (MQ=255)
                                                              aaTTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGc                                     <  1:2623704/100‑1 (MQ=255)
                                                                ttGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCTCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATtgtgn                                     <  2:1488266/98‑2 (MQ=255)
                                                                ttGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTc                                   <  1:2123659/100‑1 (MQ=255)
                                                                aggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTc                                   >  1:416521‑M2/36‑100 (MQ=255)
                                                                 tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                  <  2:1628576/100‑1 (MQ=255)
                                                                 tGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                  <  1:1134274/100‑1 (MQ=255)
                                                                 ggccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTcc                                  >  1:2521479‑M2/35‑100 (MQ=255)
                                                                  GCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                 <  1:1027688‑M1/100‑1 (MQ=255)
                                                                  GCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCa                                 >  1:1309379‑M1/1‑100 (MQ=255)
                                                                   ccggataaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                >  2:567814‑M2/33‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTTACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                <  2:1001483‑M1/100‑1 (MQ=255)
                                                                   CCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGGTACACACCCCGCAGGCCTGGTAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                <  2:1496197‑M1/100‑1 (MQ=255)
                                                                   CCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCaa                                >  2:1093135‑M1/1‑100 (MQ=255)
                                                                     GGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAcc                              <  2:1565309‑M1/100‑1 (MQ=255)
                                                                     GGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAcc                              <  1:1437146‑M1/100‑1 (MQ=255)
                                                                        taaggcgcgtcaagcgtcgcatccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                           >  2:116658‑M2/28‑100 (MQ=255)
                                                                        TGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAAccgcc                           >  1:343105‑M1/1‑100 (MQ=255)
                                                                          cGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCgg                         >  1:19978/1‑100 (MQ=255)
                                                                            aCGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGAt                       >  2:1797145/1‑100 (MQ=255)
                                                                             cGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGAt                       >  2:2646/1‑99 (MQ=255)
                                                                                ttGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCgg                   <  1:896073/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                  <  1:43540/100‑1 (MQ=255)
                                                                                 tGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGc                  <  1:1064980/100‑1 (MQ=255)
                                                                                  gACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCa                 >  1:1829876/1‑100 (MQ=255)
                                                                                   aCGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATAGCATCAGGCATTGTGCTCCACCCGCCGGATCCGGCAt                >  2:2343832/1‑100 (MQ=255)
                                                                                     gcgcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATAc              <  2:883149/100‑1 (MQ=255)
                                                                                       gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg            <  1:2666194/100‑1 (MQ=255)
                                                                                       gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg            >  2:673513/1‑100 (MQ=255)
                                                                                       gcCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCg            <  2:1817335/100‑1 (MQ=255)
                                                                                        ccTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGa           >  2:1096522/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGa           >  2:1499321/1‑100 (MQ=255)
                                                                                         cTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGAt          <  2:868811/100‑1 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGCTCCGGCATACCGATTAAt      >  2:2730992‑M2/7‑100 (MQ=255)
                                                                                             tccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAAt      >  2:2515090‑M2/7‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg     >  1:1761194‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg     >  2:2441211‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCACCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATg     <  1:1946335‑M2/95‑1 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc    <  1:627704‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc    <  1:1073674‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc    <  1:824486‑M2/96‑1 (MQ=255)
                                                                                               cggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGc    <  2:885628‑M2/96‑1 (MQ=255)
                                                                                                ggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGTGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCa   <  2:2702890‑M2/97‑1 (MQ=255)
                                                                                                ggcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCa   >  1:1876136‑M2/4‑100 (MQ=255)
                                                                                                 gcCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAg  <  1:1702214‑M2/98‑1 (MQ=255)
                                                                                                   |                                                                                                 
ACCGCGCCGCTTTTGATATTACGCAACTGGATTAATCGCCGCATCCGCCAGTGGCGCGGTGCAATTGCCGGATGCGACGCTTGACGCGCCTTATCCGGCCTACACCCGCTACACACCCCGCAGGCCTGATAAGATGCGCCAGCATCGCATCAGGCATTGTGCTCCAACCGCCGGATCCGGCATACCGATTAATGCAG  >  NC_000913/3217368‑3217564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.