BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3255217 =	NA (NA)	6 (0.070)	5/164	NT	NA	noncoding (1/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3255247 =	NA (NA)	6 (0.070)	5/164	NT	NA	noncoding (31/103 nt)	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP236 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 134 total aligned reads displayed.

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCT  >  NC_000913/3255148‑3255346

gatgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     >  2:2683167‑M1/70‑100 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     <  2:622130/100‑1 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     <  1:3912/100‑1 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     <  1:1550819/100‑1 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     >  2:225405/1‑100 (MQ=255)

cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     >  1:2460593/1‑100 (MQ=255)

cTGGAAGCTATCGGCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                                                                     <  2:247815/100‑1 (MQ=255)

 atgcgatgctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGCCt                                                                                                    >  1:283824‑M1/69‑100 (MQ=255)

  ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                                                                   >  1:819393/1‑100 (MQ=255)

    aaGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACa                                                                                                 <  1:655950/100‑1 (MQ=255)

      gCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaa                                                                                               <  2:1996337/100‑1 (MQ=255)

        tATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAt                                                                                             <  1:696534/100‑1 (MQ=255)

        gctggcgcatcttgtccggcctacgggttgtttaattcgttaatgttgttggattttgtagGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAAt                                                                                             >  1:1693346‑M1/62‑100 (MQ=255)

          ctgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc                                                                                           <  2:302808/98‑1 (MQ=255)

          ctgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATcc                                                                                           <  2:1196630/98‑1 (MQ=255)

            gtcgCGGATTCTTAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                          <  2:2356605/99‑1 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcag                                                                                         >  1:1196635/1‑99 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcag                                                                                         >  1:302808/1‑99 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                                                                                         >  1:2460319/1‑100 (MQ=255)

            gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                                                          >  2:1569660/1‑99 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                        <  2:1781875/100‑1 (MQ=255)

             tcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaac                                                                                        <  1:1079568/100‑1 (MQ=255)

                  gATGCTGAAACGCGTTTAGCCGAGGATGAATCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAt                                                                                   <  2:1189416/100‑1 (MQ=255)

                   aTGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAtt                                                                                  >  2:1896441/1‑100 (MQ=255)

                    tgtctttacgcggtagcttcatcctcggctaaacgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTa                                                                                 >  1:1321614‑M2/39‑100 (MQ=255)

                    tGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTa                                                                                 <  1:2238569/100‑1 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTaa                                                                                >  1:1034225/1‑99 (MQ=255)

                      cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                                                               >  1:1334791/1‑100 (MQ=255)

                        tttacgcggtagcttcatcctcggctaaacgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGa                                                                             >  1:1834479‑M2/35‑100 (MQ=255)

                        gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAACCTCCTTGTTCGGCCTACTACATCCAACAACATTAACGa                                                                             >  1:1656996/1‑100 (MQ=255)

                         ttacgcggtagcttcatcctcggctaaacgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAACCCAACAACATTAACGaa                                                                            >  1:2283198‑M2/34‑100 (MQ=255)

                         aaaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGaa                                                                            >  1:1006631/1‑100 (MQ=255)

                           ACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAtt                                                                          >  1:713039‑M1/1‑100 (MQ=255)

                               GTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAAc                                                                      >  2:2202752‑M1/1‑100 (MQ=255)

                               GTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAAc                                                                      >  1:2063224‑M1/1‑100 (MQ=255)

                               GTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAAc                                                                      >  2:2718713‑M1/1‑100 (MQ=255)

                                   aGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAcc                                                                  >  2:1509998/1‑100 (MQ=255)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACGGGTTGCCGGAGGCGGCGAAAACGCCTGATCCGGCCTACAAAAGCCAACAACATTAACGAATTAaacaac                                                                   <  2:299202/98‑1 (MQ=38)

                                    gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                                                                 >  2:2576588/1‑100 (MQ=255)

                                     ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                                >  2:699882/1‑100 (MQ=255)

                                     ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                                >  2:1112124/1‑100 (MQ=255)

                                     ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                                                                <  1:2525456/100‑1 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                               <  1:1180366/100‑1 (MQ=255)

                                      cGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                                                               >  1:517808/1‑100 (MQ=255)

                                       gAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTa                                                              <  2:445319/100‑1 (MQ=255)

                                           aTGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGcc                                                          >  1:283398/1‑100 (MQ=255)

                                           aTGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGcc                                                          <  1:2332987/100‑1 (MQ=255)

                                            tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg                                                         <  1:1954768/100‑1 (MQ=255)

                                              aaGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGa                                                       >  1:198799/1‑100 (MQ=255)

                                               aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc                                                      >  2:2690004/1‑100 (MQ=255)

                                               aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc                                                      <  2:1577776/100‑1 (MQ=255)

                                                  tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg                                                   >  2:1982365/1‑100 (MQ=255)

                                                   aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa                                                  <  1:602096/100‑1 (MQ=255)

                                                    ccGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGAt                                                 <  2:2194354/100‑1 (MQ=255)

                                                     cgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATg                                                >  2:1302502‑M2/6‑100 (MQ=255)

                                                         tggattttgtaggccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                            >  1:429177‑M2/43‑100 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                            <  2:2717691‑M2/99‑1 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                            >  1:1226495‑M2/2‑100 (MQ=255)

                                                         tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc                                            <  1:2104013‑M2/99‑1 (MQ=255)

                                                          aaaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCa                                           <  1:46994/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                          <  2:1010544/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                          <  2:1010618/100‑1 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                          >  2:1666486/1‑100 (MQ=255)

                                                           aaGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAg                                          >  1:2738725/1‑100 (MQ=255)

                                                            attttgtaggccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc                                         >  1:1693346‑M2/40‑100 (MQ=255)

                                                            aGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc                                         <  2:1685249/100‑1 (MQ=255)

                                                            aGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgc                                         <  2:1684207/100‑1 (MQ=255)

                                                               cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                      >  1:1287979/1‑100 (MQ=255)

                                                               cAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatc                                      <  1:476710/100‑1 (MQ=255)

                                                                aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGGATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg                                     <  1:2576606/100‑1 (MQ=255)

                                                                aGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcg                                     <  1:2537816/100‑1 (MQ=255)

                                                                 ggTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgc                                    >  1:2078137/1‑100 (MQ=255)

                                                                 ggTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgc                                    >  1:519954/1‑100 (MQ=255)

                                                                 ggTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgc                                    >  1:1462282/1‑100 (MQ=255)

                                                                  gTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgca                                   >  1:2529043/1‑100 (MQ=255)

                                                                   aggccggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAgcatcgcat                                  >  1:283824‑M2/33‑100 (MQ=255)

                                                                       CGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCgg                              <  1:2577661‑M1/100‑1 (MQ=255)

                                                                       CGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCgg                              <  2:1941954‑M1/100‑1 (MQ=255)

                                                                        ggataaggcgttttcgccgcatccggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGAATACGGc                             >  1:2469222‑M2/28‑100 (MQ=255)

                                                                           TGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACg                          <  1:519512‑M1/100‑1 (MQ=255)

                                                                           TGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACg                          >  2:1309874‑M1/1‑100 (MQ=255)

                                                                              ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                       >  1:951155/1‑100 (MQ=255)

                                                                              ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                       >  1:1477563/1‑100 (MQ=255)

                                                                              ggcgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATc                       >  2:801659/1‑100 (MQ=255)

                                                                                cgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                     >  1:1472763/1‑100 (MQ=255)

                                                                                cgAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATccc                     <  2:149286/100‑1 (MQ=255)

                                                                                  aaaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCa                   <  2:819389/100‑1 (MQ=255)

                                                                                  aaaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCa                   <  2:790993/100‑1 (MQ=255)

                                                                                   aaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaa                  >  1:2004041/1‑100 (MQ=255)

                                                                                   aaaCGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaa                  >  2:1773219/1‑100 (MQ=255)

                                                                                    aaCGCCTTATCCGGCCTACAAAATCCAACAACATTAAGGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCaaa                 >  2:1467543/1‑100 (MQ=255)

                                                                                    aaCGCCCTATCCGGCCTACAAAATCCAACAACATTACCGAACTAAACGACCCGTAGCGCGGACAAGATGCCCCAGCCTCGCATCCGGCCCGATCCCCaa                  >  2:2678534/1‑99 (MQ=255)

                                                                                      cGCCTTATCCGGCCTACAAAATCCAACAACATTATCGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACAATCTCCaaatc               <  2:1440106/100‑3 (MQ=37)

                                                                                       gCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAcc              >  2:1236066/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAAcc              >  2:673472/1‑99 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCt             >  1:362653/1‑100 (MQ=255)

                                                                                        ccTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCt             >  2:885360/1‑100 (MQ=255)

                                                                                           tATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGc          >  2:2273221/1‑100 (MQ=255)

                                                                                                ggcCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAGCCTGGCGTTTa     <  1:1564704‑M2/97‑1 (MQ=255)

                                                                                                   cTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCt  >  2:78968/1‑100 (MQ=255)

CTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCCAGCATCGCATCCGGCACGATCCCCAAAACCTGGCGTTTATCT  >  NC_000913/3255148‑3255346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.