| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,426,494 | IS2 (+) +5 bp | 15.3% | pseudogene (41‑45/933 nt) | tmpR → | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1426494 = | 105 (0.800) | 22 (0.160) | 18/176 | NT | 16.5% | pseudogene (41/933 nt) | tmpR | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| ? | NC_000913 | = 1651548 | NA (NA) | noncoding (706/706 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1426498 | 105 (0.790) | 16 (0.110) | 15/178 | NT | 12.6% | pseudogene (45/933 nt) | tmpR | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| ? | NC_000913 | = 2070271 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 181 total aligned reads displayed.
TATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAA > NC_000913/1426395‑1426593 | tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgctaacagatgtctggaaatataggggcaaatccag < 1:2042504‑M1/1‑1 (MQ=255)tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 2:3240013‑M1/100‑100 (MQ=255)tagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 1:1451413‑M1/100‑100 (MQ=255) attatGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGc < 1:658196/100‑1 (MQ=255) agtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccag > 2:2069542‑M1/99‑99 (MQ=255) gtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCa < 2:3165155‑M1/3‑1 (MQ=255) tGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTg > 1:3705481/1‑100 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTTTTTTTTTTTGTTTTAATAAATGGCAGAGCAAACCTCTCGTCTCGCAATAATTATTGATAGCACt > 1:18784/1‑98 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTgg < 2:1915412/100‑1 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAg > 2:3269283/1‑100 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAg < 1:949348/100‑1 (MQ=255) gCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGc > 2:377036/1‑100 (MQ=255) gCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGc > 2:2288613/1‑100 (MQ=255) ccTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagact < 1:1508059‑M1/100‑7 (MQ=255) cTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGa > 2:1382031/1‑100 (MQ=255) gAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGaaa < 2:1166482/100‑1 (MQ=255) gAAACCCACTTCGCGGAGGGTTATTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCGATAATTATTGATAGCACTGGAGCGaa > 1:2821561/1‑99 (MQ=255) cccACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaata > 2:1249134/1‑100 (MQ=255) cccACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaata > 2:1786640/1‑100 (MQ=255) cccACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaata > 2:2823562/1‑100 (MQ=255) ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAaataa > 2:465991‑M1/82‑100 (MQ=255) cACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaataat > 2:1123931/1‑100 (MQ=255) cTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGc < 2:1591216/100‑1 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTg > 1:1610865‑M1/76‑99 (MQ=255) gcgGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGAc < 1:3604775/100‑1 (MQ=255) cgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGAc < 2:1726798‑M1/26‑1 (MQ=255) cgGTGGGTTTTTTGTTGTCAGGAGATTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACa > 1:305343/1‑100 (MQ=255) gTGGGTTTTTTTTTTTTTTTAGTTTTAATAAATGGCAGAGCAAACCTTGCGTCTCGCAATAATTATTGATAGCACTGGCGCGAAAAATAATGCttttatt > 1:1104881/1‑94 (MQ=255) gTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACTTCGCGTCTAGCAATAATTATTGATAGAAAAAAAAAAAAAAATAATGCTGa < 1:253695/96‑1 (MQ=255) gTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccag > 2:2333292‑M1/1‑76 (MQ=255) atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCt < 2:2509025‑M1/31‑1 (MQ=255) ggTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTg > 2:2795140/1‑100 (MQ=255) ttttttGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAc < 2:1181122/100‑1 (MQ=255) tttttGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcc < 1:2753192/100‑1 (MQ=255) ttgttgTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcctcc > 2:3363428/1‑100 (MQ=255) gttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGCCctcctc < 1:321731/100‑1 (MQ=255) gttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACctcctc < 1:383045/100‑1 (MQ=255) ttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCa < 2:2843528/100‑1 (MQ=255) tgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAt < 1:1470288/100‑1 (MQ=255) tgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAt < 1:1674245/100‑1 (MQ=255) gtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAtt > 2:677411/1‑100 (MQ=255) gtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAtt > 1:3354001/1‑100 (MQ=255) tCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTa > 2:1969618/1‑100 (MQ=255) tCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTa > 2:1969523/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGTAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 1:3757160/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 1:178269/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg < 2:3293121/100‑1 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 2:2821156/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAAACTTACCTCCTCAt > 1:2403124/1‑97 (MQ=255) ggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACCGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGt < 1:2605335‑M1/46‑1 (MQ=255) ggAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTc > 1:2558697/1‑100 (MQ=255) aGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCaa > 1:2739631/1‑100 (MQ=255) tttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAAt > 1:2456944/1‑100 (MQ=255) tttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAAt > 2:1919224/1‑100 (MQ=255) ttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATg < 1:1822448/100‑1 (MQ=255) ttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATg > 2:2998549/1‑100 (MQ=255) ataaATGGTAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACAGGAGCGAAAAATAATGCTGACAATATGACCTCCTCATTAGTCAAAATGACg > 1:2309051/1‑100 (MQ=255) ataaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACg > 1:1954151/1‑100 (MQ=255) taaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata < 2:1551133‑M1/100‑53 (MQ=255) taaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGc < 1:787087/100‑1 (MQ=255) taaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGc > 2:80128/1‑100 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCa < 2:1753122‑M1/58‑1 (MQ=255) tGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGc > 2:3593416/1‑100 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGc < 2:61613‑M1/61‑1 (MQ=255) ggCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCt > 1:1128701/1‑100 (MQ=255) gtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTg < 1:2892241‑M1/63‑1 (MQ=255) agagCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTggg > 1:2763229/1‑100 (MQ=255) gagCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTgggg < 2:1721683/100‑1 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac < 2:3276672‑M1/100‑63 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGa > 2:932601/1‑100 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGa < 1:1847228/100‑1 (MQ=255) gCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGaa > 2:1455746/1‑100 (MQ=255) acagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGaaa < 2:3723438‑M1/69‑1 (MQ=255) ccTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGTCCTCCTCATTAGTCAAAATGACGCAGGCTGGGGaatc > 1:801272/1‑95 (MQ=255) tCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAActgctg < 2:3583504/100‑1 (MQ=255) gtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAActgctg < 1:1320893‑M1/75‑1 (MQ=255) tctcGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAAt < 1:173538/100‑1 (MQ=255) tctcGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAAt < 1:1919210/100‑1 (MQ=255) gaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAGATGACGCAGGCTGGGGAAACTGCTGCAAAt < 2:2391977‑M1/80‑1 (MQ=255) cGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgc > 1:1193659/1‑100 (MQ=255) aggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAg > 2:85431‑M1/14‑100 (MQ=255) aggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAg < 2:3866295‑M1/87‑1 (MQ=255) taatTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAgg > 2:2415344/1‑100 (MQ=255) ggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAGTCTGACCTCCTGATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgcgc > 1:1908034‑M1/13‑97 (MQ=255) aatTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg > 2:598621‑M1/1‑16 (MQ=255) aatTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAggg < 2:3518666/100‑1 (MQ=255) tattGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTATTCAAAGTGACGGTGGCTGGGGAAACTGCTGCAAATAGCGCAGGTaaa > 2:2110987/1‑100 (MQ=255) attGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCCTTAGTCAAAATGACGCAGGCTGGGGAAACTGCTTCAAATAGCGCAGGGaacg > 1:976670/1‑98 (MQ=255) attGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAg < 2:3775551/100‑1 (MQ=255) attGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAg > 1:693923/1‑100 (MQ=255) tGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTg < 2:305345/100‑1 (MQ=255) tGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTg > 2:531255/1‑100 (MQ=255) atccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTg > 1:3495769‑M1/6‑100 (MQ=255) gATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag > 2:1745355‑M1/1‑9 (MQ=255) gATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGa > 1:476070/1‑100 (MQ=255) gATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGa > 2:1813400/1‑100 (MQ=255) aTAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGAc < 1:1724028/100‑1 (MQ=255) tAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACt > 2:1541490/1‑100 (MQ=255) caGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACt < 2:2967176‑M1/98‑1 (MQ=255) gCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTgggtaa > 1:3268833/1‑95 (MQ=255) | TATTATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAA > NC_000913/1426395‑1426593 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |