| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | NC_000913 | 1,426,494 | IS2 (+) +5 bp | 15.3% | pseudogene (41‑45/933 nt) | tmpR → | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1426494 = | 105 (0.800) | 22 (0.160) | 18/176 | NT | 16.5% | pseudogene (41/933 nt) | tmpR | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| ? | NC_000913 | = 1651548 | NA (NA) | noncoding (706/706 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 1426498 | 105 (0.790) | 16 (0.110) | 15/178 | NT | 12.6% | pseudogene (45/933 nt) | tmpR | Rac prophage; pseudogene, tail protein family;Phage or Prophage Related; putative alpha helix protein |
| ? | NC_000913 | = 2070271 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 183 total aligned reads displayed.
ATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAGGCA > NC_000913/1426399‑1426597 | gcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACt < 1:3531414‑M1/5‑1 (MQ=255) tGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTg > 1:2963413/1‑100 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTTTTTTTTTTTGTTTTAATAAATGGCAGAGCAAACCTCTCGTCTCGCAATAATTATTGATAGCACt > 1:18784/1‑98 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTgg < 2:1915412/100‑1 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTgg > 1:3678414/1‑100 (MQ=255) gTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTgg > 1:1938946/1‑100 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAg > 2:3269283/1‑100 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAg < 2:2501119/100‑1 (MQ=255) cGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAg < 1:949348/100‑1 (MQ=255) gCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGc > 2:377036/1‑100 (MQ=255) ccTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagact < 1:1508059‑M1/100‑7 (MQ=255) ccTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCg < 2:2101697/100‑1 (MQ=255) ccTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCg < 2:3783766/100‑1 (MQ=255) aaaaaaCCCACCGCGAAGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACATCGCGTCGCGCAATAATTATTGATAGCACTGGAGCg > 1:1732521/4‑99 (MQ=38) gAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGaaa < 2:1166482/100‑1 (MQ=255) aCCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaat > 1:27831/1‑100 (MQ=255) cccACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaata > 2:1786640/1‑100 (MQ=255) cccACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaata > 2:2823562/1‑100 (MQ=255) cACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaataat > 2:1123931/1‑100 (MQ=255) aCTTCGCGGTGGGTTTTTTGTTTTTAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAaataat > 1:558527/1‑99 (MQ=255) aCTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATg < 2:2963436/100‑1 (MQ=255) aCTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATg > 2:2175280/1‑100 (MQ=255) cTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGc < 2:1591216/100‑1 (MQ=255) tCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTg < 1:2017079/100‑1 (MQ=255) acgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTg > 1:1610865‑M1/76‑99 (MQ=255) gcgGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGAc < 2:1736780/100‑1 (MQ=255) ggTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACaa > 2:3552145/1‑100 (MQ=255) gTGGGTTTTTTTTTTTTTTTAGTTTTAATAAATGGCAGAGCAAACCTTGCGTCTCGCAATAATTATTGATAGCACTGGCGCGAAAAATAATGCttttatt > 1:1104881/1‑94 (MQ=255) gTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGa > 2:3172201/1‑100 (MQ=255) gTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGa > 2:2980602/1‑100 (MQ=255) tttttGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcc < 1:2753192/100‑1 (MQ=255) ttgttgTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGAcctcc > 2:3363428/1‑100 (MQ=255) gttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGCCctcctc < 1:321731/100‑1 (MQ=255) gttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACctcctc < 1:383045/100‑1 (MQ=255) gttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCAATtagactggccccctgaatctccagacaaccaatat > 2:3693905‑M1/1‑65 (MQ=255) ttgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCa < 2:2843528/100‑1 (MQ=255) tgtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAt < 1:1674245/100‑1 (MQ=255) gtCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAtt > 2:677411/1‑100 (MQ=255) gcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCAtt > 2:1377716‑M1/58‑100 (MQ=255) tCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTa > 2:1969618/1‑100 (MQ=255) tCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTa > 2:1969523/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGTAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 1:3757160/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 1:178269/1‑100 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg < 2:3293121/100‑1 (MQ=255) cAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAAACTTACCTCCTCAt > 1:2403124/1‑97 (MQ=255) aGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcactta < 2:1687450‑M1/100‑42 (MQ=255) aGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg < 1:1445525/99‑1 (MQ=255) aGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAg > 2:1187765/1‑99 (MQ=255) aGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCaa > 1:2739631/1‑100 (MQ=255) ttttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCaaaa < 2:172208/100‑1 (MQ=255) tttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAAt > 1:2456944/1‑100 (MQ=255) tttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAAt > 2:1919224/1‑100 (MQ=255) taatgggttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAAt > 2:2803713‑M1/49‑100 (MQ=255) ttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATg > 2:1385598/1‑100 (MQ=255) ttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATg > 1:2625766/1‑100 (MQ=255) ttAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATg < 1:1822448/100‑1 (MQ=255) taataaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGa < 1:2871384/100‑1 (MQ=255) ataaATGGTAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACg > 1:2135113/1‑100 (MQ=255) taaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata < 2:1551133‑M1/100‑53 (MQ=255) taaATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGc > 2:80128/1‑100 (MQ=255) gttaagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCa < 2:1753122‑M1/58‑1 (MQ=255) aagtgataacagatgtctggaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGc < 2:61613‑M1/61‑1 (MQ=255) ggCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCt > 1:1128701/1‑100 (MQ=255) agagCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggcccgctgaatctccagacaaccaatatcacttaaataagtgatagtcttaat < 1:1834426‑M1/100‑61 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac < 2:3276672‑M1/100‑63 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGa > 2:932601/1‑100 (MQ=255) agCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGa < 1:1847228/100‑1 (MQ=255) aaaCCTCGCGTCTCGCAATAATTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactag < 1:3313856‑M1/100‑66 (MQ=255) aaaCCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAAc > 1:2549018/1‑100 (MQ=255) ccTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGTCCTCCTCATTAGTCAAAATGACGCAGGCTGGGGaatc > 1:801272/1‑95 (MQ=255) ccTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAActgc > 2:3770205/1‑100 (MQ=255) tctcGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGGCCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAAt < 1:3363401/100‑1 (MQ=255) gaaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAGATGACGCAGGCTGGGGAAACTGCTGCAAAt < 2:2391977‑M1/80‑1 (MQ=255) aaatataggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATa > 2:2299254‑M1/20‑100 (MQ=255) cGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgc > 1:1193659/1‑100 (MQ=255) cGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgc < 2:3031207/100‑1 (MQ=255) gCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgcg > 2:3583827/1‑100 (MQ=255) aggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAg > 2:85431‑M1/14‑100 (MQ=255) taatTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAgg < 1:2595422/100‑1 (MQ=255) taatTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAgg > 2:2415344/1‑100 (MQ=255) ggggcaaatccaGCACTGGAGCGAAAAATAATGCTGACAGTCTGACCTCCTGATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAgcgc > 1:1908034‑M1/13‑97 (MQ=255) aatTATTGATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattgg > 2:598621‑M1/1‑16 (MQ=255) aatTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAggg > 2:446949/1‑100 (MQ=255) attGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCCTTAGTCAAAATGACGCAGGCTGGGGAAACTGCTTCAAATAGCGCAGGGaacg > 1:976670/1‑98 (MQ=255) attGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAg > 1:693923/1‑100 (MQ=255) tGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTg < 1:3203850/100‑1 (MQ=255) tGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTg > 2:531255/1‑100 (MQ=255) gATAGCACTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacag > 2:1745355‑M1/1‑9 (MQ=255) gATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGa > 1:476070/1‑100 (MQ=255) gATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGa > 2:1813400/1‑100 (MQ=255) aTAGCACTGGAGCGAAAAAGAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCTCAGGGAAAGTgtc < 2:2627857/100‑3 (MQ=255) tAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACt > 2:1541490/1‑100 (MQ=255) cattGGAGCGAAAGAAAATGCTGATAAGCTGACCTCCTCATTAGTCAAGATGACGCAGGATCGGCAAACTGCTACAAAGAGAGCAGCGAAATTGACTAAg < 1:888875/97‑1 (MQ=255) aCTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAgg > 2:1470961/1‑100 (MQ=255) aCTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAgg < 1:1470952/100‑1 (MQ=255) cTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAgg < 1:3757053/99‑1 (MQ=255) cTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAGGc < 1:1256253/100‑1 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 2:480651‑M1/100‑100 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 2:2788346‑M1/100‑100 (MQ=255) ttagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattga < 2:1191859‑M1/100‑100 (MQ=255) | ATGTCGCCTGAAACCCACTTCGCGGTGGGTTTTTTGTTGTCAGGAGTTTTAATAAATGGCAGAGCAAACCTCGCGTCTCGCAATAATTATTGATAGCACTGGAGCGAAAAATAATGCTGACAATCTGACCTCCTCATTAGTCAAAATGACGCAGGCTGGGGAAACTGCTGCAAATAGCGCAGGGAAAGTGACTAAGGCA > NC_000913/1426399‑1426597 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |