New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4488511NA (NA)11 (0.080) 7/170 NT NA noncoding (7/36 nt) REP343 (repetitive extragenic palindromic) element; contains 1 REP sequences REP343 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4488537 NA (NA)noncoding (33/36 nt) REP343 (repetitive extragenic palindromic) element; contains 1 REP sequences REP343 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 193 total aligned reads displayed.

TTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTT  >  NC_000913/4488438‑4488636
                                                                                                   |                                                                                                   
ttattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCA                                                                                                     >  2:1734761‑M2/1‑100 (MQ=255)
 tattGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAg                                                                                                    >  2:3346950/1‑100 (MQ=255)
  attGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                                                   >  1:1485804/1‑100 (MQ=255)
  attGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGCGCATGATAAGACGCGCCAGCGTCGCATCAgg                                                                                                   >  1:3292684/1‑100 (MQ=255)
   ttGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGc                                                                                                  <  2:2184080/100‑1 (MQ=255)
   ttGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATACTGCAGTGGGGTGGGCATGATAAGACTCGCCAGCGTCGCATCAGGc                                                                                                  <  1:3588510/100‑1 (MQ=255)
     gTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAACTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaa                                                                                                >  2:452857/1‑100 (MQ=255)
      ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                                                                                               <  2:3863975/100‑1 (MQ=255)
      ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                                                                                               <  2:3358654/100‑1 (MQ=255)
      ttAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCaaa                                                                                               <  2:1818637/100‑1 (MQ=255)
        aGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGa                                                                                             >  1:752692/1‑100 (MQ=255)
         gCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGAc                                                                                            <  2:3519725/100‑1 (MQ=255)
          cAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACa                                                                                           >  1:2021794/1‑100 (MQ=255)
           aaaGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACaa                                                                                          <  1:3765586/100‑1 (MQ=255)
            aaGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATGGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCACATCAGGAAAAGACaa                                                                                          >  2:957181/1‑99 (MQ=255)
             aGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACCCGCCAGCGTCGCATCAGGCAAAGACaaa                                                                                         >  2:3265577/1‑99 (MQ=255)
              gtgtGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAAtn                                                                                       <  2:1680840/100‑2 (MQ=255)
                 tgCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCTTCGCATCAGGCAAAGACAAAtc                                                                                       >  1:120055/1‑97 (MQ=255)
                 tgCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCg                                                                                    >  2:3079117/1‑100 (MQ=255)
                 tgCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCg                                                                                    <  2:1919652/100‑1 (MQ=255)
                  gCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGc                                                                                   >  1:1946689/1‑100 (MQ=255)
                    ttCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCt                                                                                 <  1:3038653/100‑1 (MQ=255)
                    ttCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGACAAAGACAAATCTCGCCt                                                                                 >  1:2100320/1‑100 (MQ=255)
                     tCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTg                                                                                >  2:1113465/1‑100 (MQ=255)
                     tCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTg                                                                                <  1:2901323/100‑1 (MQ=255)
                     tCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTg                                                                                >  2:646552/1‑100 (MQ=255)
                       gTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAGAtcggaagagcg                                                                              >  1:2645049/1‑91 (MQ=38)
                       gTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGAc                                                                              <  2:3733805/100‑1 (MQ=255)
                         tCATTCCTGAAAAATAATTAAAATTCAATATATTTCAGTGGGGTGGGCATGAAAAGACCCACCAGCGTCGCATCACGCACAGACAAATCTCGCCTGAc                                                                              >  1:906863/1‑98 (MQ=255)
                          cATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTa                                                                           >  1:3330665/1‑100 (MQ=255)
                             tCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTTGCCTGACTTACct                                                                        <  2:2637384/100‑1 (MQ=255)
                              ccTGACAAATAATTAAAATTCAATATATTGCAGTGGAGAGGGCATGACAACACGCGCCAGCGGCGCATCAGGCAAAGACAAATCTCGCCTGACtccc                                                                          >  1:3135549/1‑94 (MQ=255)
                              ccTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACctt                                                                       >  2:947966/1‑100 (MQ=255)
                               cTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGTTCATGATAAGACGCGCCATCGTCGCATCTGGCAAAGACAAATCCCGCCCGACTTACcttc                                                                      >  1:601274/1‑100 (MQ=38)
                               cTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCATGCAAAGACAAATCTCGCCTGACTTACcttc                                                                      >  1:162334/1‑100 (MQ=255)
                                  aaaaaTAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCttcttc                                                                   <  2:2328511/100‑1 (MQ=255)
                                   ataataatTAAAATTCAATATATTGCATTGGGGTGGGCAGTATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCttcttc                                                                   <  1:815137/97‑1 (MQ=38)
                                    aaaTAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTtctc                                                                 <  2:584563/100‑1 (MQ=255)
                                     aataatTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcc                                                                <  1:205186/100‑1 (MQ=255)
                                       taatTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccc                                                              <  2:1064413/100‑1 (MQ=255)
                                        agttAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCACGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTccccc                                                             <  1:2350410/98‑1 (MQ=255)
                                        aatTAAAATTCAATATATTCCAGTGGGGTGGGCATGACAAGACGCGCCAGCGTCGCATCAGGCACAGACAAATCTCGCCTGACTTACCTTCTTCTccccc                                                             >  1:2063871/1‑100 (MQ=255)
                                         atTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccccc                                                            <  2:917976/100‑1 (MQ=255)
                                         atTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTcccccc                                                            >  1:1586484/1‑100 (MQ=255)
                                          ttAAAATTCAATATATTGCAGTGGGGTGGGCATGATAATACGCTCCAGCGTCGCAGCCGGGAAAGACAAATCTCGCCTGACCTACTTTCTTTTcccccc                                                            >  1:3320757/1‑99 (MQ=255)
                                           tAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCa                                                          >  1:1076885/1‑100 (MQ=255)
                                            aaaaTTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGGCTGACTTACCTTCTTCTCCCCCCCa                                                          >  1:395259/1‑99 (MQ=255)
                                              aaTTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCa                                                       <  2:1970569/100‑1 (MQ=255)
                                                   aaTATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc                                                  >  1:1156668/1‑100 (MQ=255)
                                                   aaTATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc                                                  >  2:3333478/1‑100 (MQ=255)
                                                   aaTATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTc                                                  <  2:3293318/100‑1 (MQ=255)
                                                     tatatTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTccc                                                >  2:436654/1‑100 (MQ=255)
                                                     tatatTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTccc                                                <  1:2207340/100‑1 (MQ=255)
                                                     tatatTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCAGCAAACTcccc                                               <  1:3435288/100‑1 (MQ=255)
                                                      atatTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTcccc                                               <  2:2920217/100‑1 (MQ=255)
                                                        atTGCCGTGGGGTGGGCATGATAAGACGCCCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCaa                                             <  1:3231371/100‑1 (MQ=255)
                                                          tGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACa                                           >  1:302195/1‑100 (MQ=255)
                                                           gCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACan                                          <  1:71764/100‑2 (MQ=255)
                                                           gCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAt                                          <  1:1007357/100‑1 (MQ=255)
                                                           gCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAt                                          >  2:1330966/1‑100 (MQ=255)
                                                           gCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTAGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAt                                          >  2:2402912/1‑100 (MQ=255)
                                                             aGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATcc                                        >  2:1610683/1‑100 (MQ=255)
                                                              gtggggtgggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACAcccc                                       >  1:649267/1‑100 (MQ=255)
                                                                 gggtgggCATGATAAGCCGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCcgcg                                    <  1:3642309/100‑1 (MQ=255)
                                                                 gggtgggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCcgcg                                    <  2:3196284/100‑1 (MQ=255)
                                                                 gggtgggCAGGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCcgcg                                    <  1:3138999/100‑1 (MQ=255)
                                                                 ggctgggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCcgcg                                    <  2:65765/97‑1 (MQ=255)
                                                                  ggtgggCATGATAAGACGCGCCAGCGTCGCATCGGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGt                                   >  2:2533659/1‑100 (MQ=255)
                                                                   gtgggCATGATAAGACGCGCCAGCGTCGCATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacgaagcacactttgcta                                  <  1:3204245‑M2/100‑68 (MQ=255)
                                                                   gtgggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTa                                  <  1:3604643/100‑1 (MQ=255)
                                                                    tgggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTAc                                 <  2:1526259/100‑1 (MQ=255)
                                                                     gggCATGATAAGATGCGCCAGCGTCTCATCAGGCAAAGACAAATCTCGTCTGACTTGCCTTCGTCTCCCCCCCAGCAAACTCCCCAACATCCcg                                      <  1:1884315/94‑1 (MQ=38)
                                                                     gggCATGATAAGACGCGCCAGCGTCGCATCAtgcccaccccactgcaatatattgaattttaattatttttcagaaatgaacgaagcacactttgctaac                                <  1:1799842‑M2/100‑70 (MQ=255)
                                                                     gggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACa                                >  2:2961733/1‑100 (MQ=255)
                                                                      ggCATGATAAGACGCGCCAGCGTCGCATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacgaagcacactttgctaaca                               <  1:244539‑M2/100‑71 (MQ=255)
                                                                      ggCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGGCCAATCTCGCCTGACTTACCTTCTTCCCCCCCCCAGCAAACTCCCCAACATCCCGCGTACac                               >  1:2175616/1‑99 (MQ=255)
                                                                       ttccgatctgACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCTGCGTACAAt                              <  1:1655594/91‑1 (MQ=255)
                                                                       gCATGATAAGACGCGCCAGCGTCGCATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacaaagcaaacttagctaacaa                              <  1:1909396‑M2/100‑72 (MQ=255)
                                                                       gCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAAt                              >  1:1332205/1‑100 (MQ=255)
                                                                       gCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAAt                              >  2:1160816/1‑100 (MQ=255)
                                                                        cATGATAAGACGCGCCAGCGTCTTATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacgaagcacactttgctaacaat                             <  2:102348‑M2/100‑73 (MQ=255)
                                                                        cATGATAAGACGCGCCAGCGTCTTATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacgaagcacactttgctaacaat                             <  1:763009‑M2/100‑73 (MQ=255)
                                                                        cATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATc                             <  2:3023250/100‑1 (MQ=255)
                                                                          tGATAAGACGCGCCAGCGTCGCATCAtgcccaccccactgcaatatattgaattttaattatttttcaggaatgaacgaagcacactttgctaacaataa                           <  1:2832189‑M2/100‑75 (MQ=255)
                                                                             tAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGAt                         <  2:342784/99‑1 (MQ=255)
                                                                                 aCGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTc                    <  2:1142111/100‑1 (MQ=255)
                                                                                   gcgtCAGCGGCGCATCAGGCAAAGACTAAGCTCGCCTGACTTTCCTTCTTCTCCCCGCCAGCAAACTCCCCAACATCCCGCGTACATTCTGATTCGt                     <  1:1028179/97‑1 (MQ=255)
                                                                                   gcgcCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCAc                  <  2:3104584/100‑1 (MQ=255)
                                                                                   gcgcCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCAc                  >  1:3716878/1‑100 (MQ=255)
                                                                                    cgcCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCAc                  >  1:508894/1‑99 (MQ=255)
                                                                                     gcCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACtt                >  2:1420291/1‑100 (MQ=255)
                                                                                       cAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTgg              <  2:2114837/100‑1 (MQ=255)
                                                                                         gCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCg            <  2:2648740/100‑1 (MQ=255)
                                                                                            tCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgc         <  2:2848628/100‑1 (MQ=255)
                                                                                              gCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgcgn       <  1:3702608/100‑2 (MQ=255)
                                                                                              gCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgcgg       >  2:284031/1‑100 (MQ=255)
                                                                                              gCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgcgg       <  1:2479385/100‑1 (MQ=255)
                                                                                              gCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgcgg       >  2:717396/1‑100 (MQ=255)
                                                                                              gCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAgcgg       >  2:2580036/1‑100 (MQ=255)
                                                                                                   aGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCtt  >  2:3217112/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TTATTGTTAGCAAAGTGTGCTTCGTTCATTCCTGAAAAATAATTAAAATTCAATATATTGCAGTGGGGTGGGCATGATAAGACGCGCCAGCGTCGCATCAGGCAAAGACAAATCTCGCCTGACTTACCTTCTTCTCCCCCCCAGCAAACTCCCCAACATCCCGCGTACAATCTGATTCGTCACTTGGCGAGCGGCGCTT  >  NC_000913/4488438‑4488636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.