| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3620116 | NA (NA) | 17 (0.130) | 10/166 | NT | 100% | coding (925/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor |
| ? | NC_000913 | = 3620152 | 0 (0.000) | coding (961/4236 nt) | rhsB | Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor | |||||
CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑cgccgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3620018‑3620116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTGT < NC_000913/3620152‑3620048 CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C > 2:2467300/1‑100CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C > 1:1475416/1‑100CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C < 1:3663646/100‑1CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C > 2:37999/1‑100CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C > 2:379265/1‑100CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑C > 2:1230997/1‑100 CCTGCCGGGTTACACCGAATATGGCCGGGACACCGGCGTCCGTCTGTCTCCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTATCTGCCG‑‑CG > 1:1053383/1‑100 CCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CG > 2:1015647/1‑100 CCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CG > 2:209454/1‑100 CCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CG > 2:3119642/1‑100 CTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGC > 1:2240536/1‑100 CTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGC > 2:2453192/1‑100 CTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGC > 1:2749381/1‑100 CTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGC > 2:1073027/1‑100 CTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGC > 2:1719169/1‑100 TGCCGGGTTACACCGCAGATGGCCGGGGCAACGGCGTCCGTCTGTCTGCCGTGTGGCTGACGCACGCCCCGGAATACCCGGAGAACTTACCTGCCG‑‑CGC > 1:2972743/1‑99 TGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATCCCCGGAGAATTTACCTGCCG‑‑CGCC > 1:1470168/1‑100 TGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCC < 2:221252/100‑1 TGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCC > 2:505688/1‑100 TGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCC < 2:268277/100‑1 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGGATTTACCTGCCG‑‑CGCCG > 2:1603721/1‑100 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCtg > 1:2309650/1‑98 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCG < 2:1677758/100‑1 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCG > 2:1261651/1‑100 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCG < 2:3067298/100‑1 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCG < 2:3670926/100‑1 GCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCG > 2:3722502/1‑100 CCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGC > 2:2879188/1‑100 CCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGC < 2:289163/100‑1 CCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGC < 2:2251408/100‑1 CCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGC > 2:3327388/1‑100 CCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGC > 1:1354976/1‑100 GGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCcctg > 1:2205797/1‑95 TTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCGGCGGTGGGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGggtg < 1:2443933/100‑5 ACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑GGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGG < 1:2105554/100‑1 GGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCG < 2:2333171/100‑1 GGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAAGACCCGGAGAATTTACCT‑‑‑‑‑‑‑GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCA < 1:2722618/100‑1 GCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGGGGCGTCCAGCCATAGCGCACCAGCGGCGC < 2:2468912/100‑1 GCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGGGGCGTCCAGCCATAGCGCACCAGCGGCGC < 1:2925172/100‑1 CATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCG < 1:1286448/100‑1 ATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGG < 1:3188887/100‑1 TCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGC < 2:1301785/100‑1 TCCGCCTGTCTGCCGTGTGGCTGACGCACGGCCCGGAATACCCGGAGAATTTACCGGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCATCGGCGCGGC < 1:490851/100‑1 CCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCA < 2:1908066/100‑1 CCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCAAGCCATAGCGCACCAGCGGCGCGGCA < 2:367412/100‑1 CCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CG‑‑‑‑G‑GGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAA < 2:2720763/100‑1 CCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCT‑‑‑‑‑‑‑GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAA < 1:1800236/100‑1 CGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAG < 2:2757045/100‑1 CGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAG < 2:2167284/100‑1 TCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGT < 2:2845239/100‑1 GTGGCGGACGCACGACCCGGAATACCCGGAGAATTTACCGCCAGTTCGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCG < 2:1952021/100‑1 CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCa > 1:308393/1‑99 GCCGCGTGGCGTCCAGCCATAGCGCAGCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCG > 2:2315623/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGTGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCTTCAGCCACACGGCAGACAGACGGATGCCG > 1:2296298/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGGGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCATCAGCCACACGGCAGACAGACGGATGCCG > 1:2296125/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAACTTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCG > 1:1558459/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGTCAGACAGACGGATGCCG > 1:202426/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCG > 2:2966806/1‑100 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCG < 1:3551094/100‑1 GCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGCGCGTCAGCCACACGGCAGACAGACGGATGCCG < 2:3617875/100‑1 CCGCGTGGCGTCCAGTCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT < 2:3754381/100‑1 CCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT < 2:3389184/100‑1 CCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT < 2:2299715/100‑1 CCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT > 2:1261037/1‑100 CGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTT > 2:3065474/1‑100 CGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTT > 2:1032286/1‑100 CGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT < 1:2857018/99‑1 CGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCCCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGT < 2:2130493/99‑1 CGCGTGGCGTCCAGCCATAGCGCAACAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTT > 1:1590773/1‑100 GCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTG < 1:3224987/100‑1 GCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTG < 1:3235889/100‑1 GCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTG < 1:794760/100‑1 GCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTG < 1:1991761/100‑1 CGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTGT < 2:2006413/100‑1 CGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTGT > 1:3012814/1‑100 CCCTGCCGGGTTACACCGAATATGGCCGGGACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCG‑‑cgccgc‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3620018‑3620116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGCCGCGTGGCGTCCAGCCATAGCGCACCAGCGGCGCGGCAGGTAAATTCTCCGGGTATTCCGGGTCGTGCGTCAGCCACACGGCAGACAGACGGATGCCGTTGT < NC_000913/3620152‑3620048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |